Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Loxosceles_20reclusa_20[genbank_20GCA_5F001188405.1_202015-04-27]
143,665 sequences; 3,262,478,678 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq5901 140 5e-27
seq72566 91.5 2e-12
>seq5901
Length=104132
Score = 140 bits (154), Expect = 5e-27
Identities = 293/431 (68%), Gaps = 8/431 (2%)
Strand=Plus/Minus
Query 1455882 CATTTCATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAA 1455941
|||||||| || ||| | ||||| ||| ||||||||||| |||||||| ||| ||
Sbjct 21234 CATTTCATTGCCCAAGTCTTAGCCTTCTTT-GCCGCCAGCGACGGCATCGTCAACGAAAA 21176
Query 1455942 CCTGGCCGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTT 1456001
| || || || | || ||||| || || || || || | |||||||| ||
Sbjct 21175 TTTACTCGCGCGGTTCGGTCAGGAAGTCCAGTTACCCGAAGCGCGATGCTTTTACGGATT 21116
Query 1456002 CCAGATCGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGT 1456061
|| || ||||| |||||||| || || |||| ||| | || |||||||| ||| |
Sbjct 21115 TCAAATTGCCATGGAAAACATTCATTCAGAAATGTACAGCTTGCTCATCGACACGTACAT 21056
Query 1456062 CAAGGACCCGGTCGAGAAGGACCACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAG 1456121
| || ||| |||| || |||| ||| |||||| || ||| | || | || |
Sbjct 21055 TACCGATCCGAAACAGAAAAACGACCTGTTTGACGCCATTGAAACGTTCCCCTGCGTTCG 20996
Query 1456122 GAAAAAGGCCGACTGGGCGATGAAGTGGATCAACAAGGAGGGCCTCGACACTTTGCCGAG 1456181
|| ||||| || ||||| | || ||||| || | |||| | || || ||
Sbjct 20995 AAAGAAGGCAGAATGGGCTCTCAACTGGATTC----GGCCCGACTCGTCCCTCGGC-GAA 20941
Query 1456182 CGGCTCGTCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATC 1456240
|| || ||| || ||| || || ||| | || |||||||| ||| ||||||
Sbjct 20940 CGTCTGCTCGCTTTCGCCATAGTGGAAGGCGTGTTCTTCTCGGGATCGTTCGCAGCCATC 20881
Query 1456241 TTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCTTCTGCTTTAGCAACGAATTTATCAG 1456300
|| |||||||||||| | || || |||||||| || || |||||||| || |||||
Sbjct 20880 TTCTGGCTCAAGAAGAGAGGGCTGCTGCCCGGT-TTGACGTTCAGCAACGAGTTCATCAG 20822
Query 1456301 TCGCGACGAAG 1456311
||| |||||||
Sbjct 20821 TCGAGACGAAG 20811
>seq72566
Length=7134
Score = 91.5 bits (100), Expect = 2e-12
Identities = 271/410 (66%), Gaps = 15/410 (4%)
Strand=Plus/Plus
Query 1455907 TTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGCCGCTTTATGAAAGAG 1455966
|| ||||| |||||||| |||||||| || || | || ||| |||| ||||
Sbjct 177 TTCTTCGCTGCCAGCGACGGCATCGTTAATGAAAATTTACTCGCCCGTTTTAGTCAAGAA 236
Query 1455967 GTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCCATCGAAAACATCCAC 1456026
| ||| | || || || || | ||||||||||| || || ||||| || ||||| ||
Sbjct 237 ATTCAACTACCCGAAGCGCGATGCTTTTACGGGTTTCAAATAGCCATGGAGAACATTCAT 296
Query 1456027 TCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCGGTCGAGAAGGACCAC 1456086
|| |||| ||| | || || ||||| ||| ||| || || || | || ||
Sbjct 297 TCAGAAATGTACAGTTTGCTCATTGACACATACATCACTGATCCAAAACAGTAATACAAC 356
Query 1456087 CTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCCGACTGGGCGATGAAG 1456146
| ||| ||||||||| ||| | || | || | || || || || ||||| ||||
Sbjct 357 TTGTTTGACGCCATCGAAACGTTCCCCTGCGTTCGAAAGAAAGCAGAGTGGGCTTTGAAT 416
Query 1456147 TGGATCAACAAGGAGGGCCTCGACACTTTGCCGAGCGGCTCGTCGGCTTTGCCGC----G 1456202
||||| | ||| ||| | | | | || ||| | | ||||| ||| |
Sbjct 417 TGGATTCGCTCCGAG----TCG-CCCCTCGGTGAACGG-TTGCTTGCTTT--CGCTATAG 468
Query 1456203 TCGAGGGCATCTTTTTCTCGGGCAGTTTCTGC-GCCATCTTTTGGCTCAAGAAGCGCGGC 1456261
| || || | || || ||||| | | ||| ||||| |||||||||||||| | ||
Sbjct 469 TGGAAGGTGTTTTCTTTTCGGG-ATCGTTTGCAGCCATTTTTTGGCTCAAGAAAAGAGGA 527
Query 1456262 CTCATGCCCGGTCTTCTGCTTTAGCAACGAATTTATCAGTCGCGACGAAG 1456311
| | |||||| || || ||||||||| | |||||||| |||||||
Sbjct 528 TTGCTCCCCGGT-TTAACGTTCAGCAACGAACTCATCAGTCGAGACGAAG 576
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7163954446693730
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |