Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loxosceles_20reclusa_20[genbank_20GCA_5F001188405.1_202015-04-27] 143,665 sequences; 3,262,478,678 total letters Query= NC_027984.1 Length=57677 Score E Sequences producing significant alignments: (Bits) Value seq140194 226 1e-54 >seq140194 Length=4052 Score = 226 bits (250), Expect = 1e-54 Identities = 330/470 (70%), Gaps = 31/470 (7%) Strand=Plus/Plus Query 5610 TTCGACAATGCGCTCGGCTTCATCCTTGTCATAGATACCAGCAAATCCGAAGGCGAGACG 5669 ||| || |||||||| || || |||| |||||||||||| | | |||||||| | || Sbjct 2332 TTCTACGATGCGCTCTGCCTCGTCCTGGTCATAGATACCGCCGTACCCGAAGGCCAAGCG 2391 Query 5670 GGCACACTGAATCATGGCTTTATGACGTAACATCCGTTTGGGATGCGACTGCCACGGCCC 5729 |||||||| ||||||||||| || || | ||| || || ||||| ||||| || || Sbjct 2392 TGCACACTGGATCATGGCTTTGTGGCGCAGCATGCGGCGCGGGTGCGATTGCCAGGGGCC 2451 Query 5730 CGTGATTTCTCTGCCTTCGCGGGTTTTGAATGGTTCGCGGCGGCATTCATCCATCCACTC 5789 | || || | ||| | ||| || |||||||||| Sbjct 2452 CATG---------CCATTGCGCTT------------------GCACTCGGCCATCCACTC 2484 Query 5790 GGTAACGCAGATCGGATGATTACGGTCCTTGCGGTAAATCCGGCATGTGCAGGATTCATT 5849 || || ||| || | || ||||| |||||||| || ||| |||||| ||| | Sbjct 2485 CGTCACTTTGATAGGCCGGTTGCGGTCTTTGCGGTAGATGATGCAGGTGCAGCTTTCGTC 2544 Query 5850 GTCCTGCTCAAAGTCCATGCCATCAAACTGCTGGTTTTCGTTGATGATGCGGGACCAGCC 5909 || ||||||||| || || || || |||||| ||| | |||||||| || |||||| Sbjct 2545 GTTCTGCTCAAACTCGATACCGTCGAACTGCGGGTGTGAATTGATGATCCGACTCCAGCC 2604 Query 5910 ATCAACGCCCACCACCGGAACGATGCCGTTCTGCTTATCAGGGAAGGCGTAAATTTCTTT 5969 || |||||||| || || ||||||||||| | ||| || ||||||||||| ||||| || Sbjct 2605 GTCCACGCCCACAACGGGCACGATGCCGTTGTTCTTGTCGGGGAAGGCGTAGATTTCCTT 2664 Query 5970 CGTCCACGGATTAAGGCCGTACTGGTTGGCGACGATCAGCAATGCGATGAACTGCGCATC 6029 ||||| || || || |||||||||||||||| | ||||| ||| | | |||||| || Sbjct 2665 GGTCCAGGGGTTCAGCGCGTACTGGTTGGCGACCACCAGCAGGGCGGTCATCTGCGCGTC 2724 Query 6030 GCTGGCATCACCTTTAAATGCCGTCTGGC--GAAGAGTGGTGATCAGTTC 6077 ||| | | ||||| || |||| |||| ||| ||| |||||| || Sbjct 2725 GCTCACCTGGCCTTTGAAGGCCG--TGGCCTTAAGCGTGCCGATCAGGTC 2772 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 184130133136470