Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Loxosceles_20reclusa_20[genbank_20GCA_5F001188405.1_202015-04-27]
143,665 sequences; 3,262,478,678 total letters
Query= NC_027984.1
Length=57677
Score E
Sequences producing significant alignments: (Bits) Value
seq140194 226 1e-54
>seq140194
Length=4052
Score = 226 bits (250), Expect = 1e-54
Identities = 330/470 (70%), Gaps = 31/470 (7%)
Strand=Plus/Plus
Query 5610 TTCGACAATGCGCTCGGCTTCATCCTTGTCATAGATACCAGCAAATCCGAAGGCGAGACG 5669
||| || |||||||| || || |||| |||||||||||| | | |||||||| | ||
Sbjct 2332 TTCTACGATGCGCTCTGCCTCGTCCTGGTCATAGATACCGCCGTACCCGAAGGCCAAGCG 2391
Query 5670 GGCACACTGAATCATGGCTTTATGACGTAACATCCGTTTGGGATGCGACTGCCACGGCCC 5729
|||||||| ||||||||||| || || | ||| || || ||||| ||||| || ||
Sbjct 2392 TGCACACTGGATCATGGCTTTGTGGCGCAGCATGCGGCGCGGGTGCGATTGCCAGGGGCC 2451
Query 5730 CGTGATTTCTCTGCCTTCGCGGGTTTTGAATGGTTCGCGGCGGCATTCATCCATCCACTC 5789
| || || | ||| | ||| || ||||||||||
Sbjct 2452 CATG---------CCATTGCGCTT------------------GCACTCGGCCATCCACTC 2484
Query 5790 GGTAACGCAGATCGGATGATTACGGTCCTTGCGGTAAATCCGGCATGTGCAGGATTCATT 5849
|| || ||| || | || ||||| |||||||| || ||| |||||| ||| |
Sbjct 2485 CGTCACTTTGATAGGCCGGTTGCGGTCTTTGCGGTAGATGATGCAGGTGCAGCTTTCGTC 2544
Query 5850 GTCCTGCTCAAAGTCCATGCCATCAAACTGCTGGTTTTCGTTGATGATGCGGGACCAGCC 5909
|| ||||||||| || || || || |||||| ||| | |||||||| || ||||||
Sbjct 2545 GTTCTGCTCAAACTCGATACCGTCGAACTGCGGGTGTGAATTGATGATCCGACTCCAGCC 2604
Query 5910 ATCAACGCCCACCACCGGAACGATGCCGTTCTGCTTATCAGGGAAGGCGTAAATTTCTTT 5969
|| |||||||| || || ||||||||||| | ||| || ||||||||||| ||||| ||
Sbjct 2605 GTCCACGCCCACAACGGGCACGATGCCGTTGTTCTTGTCGGGGAAGGCGTAGATTTCCTT 2664
Query 5970 CGTCCACGGATTAAGGCCGTACTGGTTGGCGACGATCAGCAATGCGATGAACTGCGCATC 6029
||||| || || || |||||||||||||||| | ||||| ||| | | |||||| ||
Sbjct 2665 GGTCCAGGGGTTCAGCGCGTACTGGTTGGCGACCACCAGCAGGGCGGTCATCTGCGCGTC 2724
Query 6030 GCTGGCATCACCTTTAAATGCCGTCTGGC--GAAGAGTGGTGATCAGTTC 6077
||| | | ||||| || |||| |||| ||| ||| |||||| ||
Sbjct 2725 GCTCACCTGGCCTTTGAAGGCCG--TGGCCTTAAGCGTGCCGATCAGGTC 2772
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 184130133136470
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |