Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Loxosceles_20reclusa_20[genbank_20GCA_5F001188405.1_202015-04-27]
143,665 sequences; 3,262,478,678 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq1013 127 3e-24
seq31000 93.3 5e-14
seq2243 89.7 6e-13
>seq1013
Length=399926
Score = 127 bits (140), Expect = 3e-24
Identities = 260/382 (68%), Gaps = 22/382 (6%)
Strand=Plus/Minus
Query 11444 ATCTTGCGATCAAAACGACCCGGGCGAAGGAGGGCGTCATCAAGGATATCCACGCGATTA 11503
|||| || ||||||||||| || | ||| || || ||| | || |||| || |||
Sbjct 291087 ATCTGCCGGTCAAAACGACCAGGCCTAAGCAGTGCTGGATCTAAGACATCCGGACGGTTA 291028
Query 11504 GTGGCCGCAATAACCACAATGCCAGTCTCATTG---TCAAAGCCATCCATCTCGGTGAGT 11560
|| || ||||| | | | ||| |||||| ||||||||||||||||| | |
Sbjct 291027 GTCGCAGCAATTATTATTACGCC---CTCATTAGACTCAAAGCCATCCATCTCAACTAAT 290971
Query 11561 AATTGATTAATTGTTTGTTCTCTCTCATCATTTGCTGGCATACCACC---AGCACTG--- 11614
|| ||||| | |||||||||||| |||||||| | |||||| | || ||
Sbjct 290970 AACTGATTTAATGTTTGTTCTCTTTCATCATTACC------ACCACCAAGACCAATGCCA 290917
Query 11615 CGTTGCTTGCCCACCGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGG 11674
|| || | ||||||||||| |||||||| || || | ||||| || ||||| |
Sbjct 290916 CGATGTCTACCCACCGCATCTATCTCATCTATAAAAATTATACAAGGAGCATTTTTCTTG 290857
Query 11675 GCGATTTCAAAGAGATCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAG 11734
| ||||| | ||| ||||| | | ||||| ||||||||||||||||| |||||
Sbjct 290856 CCTTGATCAAACATATCACGAACACGGCTCGCACCAACACCAACAAACATCTCAACAAAA 290797
Query 11735 TTTGCGGCAGAGCACTG--GATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGA 11792
| | |||| | || | |||||| ||||| | ||| || || || || || || |
Sbjct 290796 TCAGATCCAGA--AATGCTAAAGAATGGTACATTAGCTTCTCCTGCAATTGCACGAGCAA 290739
Query 11793 GGAGGGTCTTTCCCGTACCTGG 11814
| | || || || || || ||
Sbjct 290738 GTAAAGTTTTACCAGTTCCAGG 290717
>seq31000
Length=33412
Score = 93.3 bits (102), Expect = 5e-14
Identities = 134/188 (71%), Gaps = 1/188 (1%)
Strand=Plus/Plus
Query 111233 AGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATT 111292
||||| | || |||||||||||||| |||||||||||| |||||| | ||||
Sbjct 21723 AGGGCTAAAGACGCCAAATTGCAAACGGCCGTCTCATCCGGCGAACTGTACTGCACAATT 21782
Query 111293 TCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTG 111352
|||| || | || || | | || || ||||| | ||||| || |||
Sbjct 21783 TCTGAGCAGAGATTACTACACGTGATGGTGCCCAAGTGACGCTGGTTCGATTTGGCATTG 21842
Query 111353 CACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCC 111412
||||| | |||||||||||||| ||||| ||||| ||| | || ||||||||||| ||
Sbjct 21843 CACGCGAC-TTGTAGAGCATGTACGGCGTTCCCGTTTCCATTTGCGATTTGAGAATGGCT 21901
Query 111413 TTCCAAAC 111420
||||| ||
Sbjct 21902 TTCCACAC 21909
>seq2243
Length=133560
Score = 89.7 bits (98), Expect = 6e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 111349 GTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAAT 111408
||||||||| ||||||||||||||||| ||||| ||||| |||||||| |||||||| ||
Sbjct 81392 GTTGCACGCGTCCTTGTAGAGCATGTACGGCGTTCCCGTTTCCGTCTGCGATTTGAGGAT 81451
Query 111409 AGCCTTCCAAAC 111420
|| ||||| ||
Sbjct 81452 GGCATTCCAGAC 81463
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 626904172284000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |