Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loxosceles_20reclusa_20[genbank_20GCA_5F001188405.1_202015-04-27] 143,665 sequences; 3,262,478,678 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq1013 127 3e-24 seq31000 93.3 5e-14 seq2243 89.7 6e-13 >seq1013 Length=399926 Score = 127 bits (140), Expect = 3e-24 Identities = 260/382 (68%), Gaps = 22/382 (6%) Strand=Plus/Minus Query 11444 ATCTTGCGATCAAAACGACCCGGGCGAAGGAGGGCGTCATCAAGGATATCCACGCGATTA 11503 |||| || ||||||||||| || | ||| || || ||| | || |||| || ||| Sbjct 291087 ATCTGCCGGTCAAAACGACCAGGCCTAAGCAGTGCTGGATCTAAGACATCCGGACGGTTA 291028 Query 11504 GTGGCCGCAATAACCACAATGCCAGTCTCATTG---TCAAAGCCATCCATCTCGGTGAGT 11560 || || ||||| | | | ||| |||||| ||||||||||||||||| | | Sbjct 291027 GTCGCAGCAATTATTATTACGCC---CTCATTAGACTCAAAGCCATCCATCTCAACTAAT 290971 Query 11561 AATTGATTAATTGTTTGTTCTCTCTCATCATTTGCTGGCATACCACC---AGCACTG--- 11614 || ||||| | |||||||||||| |||||||| | |||||| | || || Sbjct 290970 AACTGATTTAATGTTTGTTCTCTTTCATCATTACC------ACCACCAAGACCAATGCCA 290917 Query 11615 CGTTGCTTGCCCACCGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGG 11674 || || | ||||||||||| |||||||| || || | ||||| || ||||| | Sbjct 290916 CGATGTCTACCCACCGCATCTATCTCATCTATAAAAATTATACAAGGAGCATTTTTCTTG 290857 Query 11675 GCGATTTCAAAGAGATCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAG 11734 | ||||| | ||| ||||| | | ||||| ||||||||||||||||| ||||| Sbjct 290856 CCTTGATCAAACATATCACGAACACGGCTCGCACCAACACCAACAAACATCTCAACAAAA 290797 Query 11735 TTTGCGGCAGAGCACTG--GATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGA 11792 | | |||| | || | |||||| ||||| | ||| || || || || || || | Sbjct 290796 TCAGATCCAGA--AATGCTAAAGAATGGTACATTAGCTTCTCCTGCAATTGCACGAGCAA 290739 Query 11793 GGAGGGTCTTTCCCGTACCTGG 11814 | | || || || || || || Sbjct 290738 GTAAAGTTTTACCAGTTCCAGG 290717 >seq31000 Length=33412 Score = 93.3 bits (102), Expect = 5e-14 Identities = 134/188 (71%), Gaps = 1/188 (1%) Strand=Plus/Plus Query 111233 AGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATT 111292 ||||| | || |||||||||||||| |||||||||||| |||||| | |||| Sbjct 21723 AGGGCTAAAGACGCCAAATTGCAAACGGCCGTCTCATCCGGCGAACTGTACTGCACAATT 21782 Query 111293 TCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTG 111352 |||| || | || || | | || || ||||| | ||||| || ||| Sbjct 21783 TCTGAGCAGAGATTACTACACGTGATGGTGCCCAAGTGACGCTGGTTCGATTTGGCATTG 21842 Query 111353 CACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCC 111412 ||||| | |||||||||||||| ||||| ||||| ||| | || ||||||||||| || Sbjct 21843 CACGCGAC-TTGTAGAGCATGTACGGCGTTCCCGTTTCCATTTGCGATTTGAGAATGGCT 21901 Query 111413 TTCCAAAC 111420 ||||| || Sbjct 21902 TTCCACAC 21909 >seq2243 Length=133560 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 111349 GTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAAT 111408 ||||||||| ||||||||||||||||| ||||| ||||| |||||||| |||||||| || Sbjct 81392 GTTGCACGCGTCCTTGTAGAGCATGTACGGCGTTCCCGTTTCCGTCTGCGATTTGAGGAT 81451 Query 111409 AGCCTTCCAAAC 111420 || ||||| || Sbjct 81452 GGCATTCCAGAC 81463 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 626904172284000