Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Loxosceles_20reclusa_20[genbank_20GCA_5F001188405.1_202015-04-27]
143,665 sequences; 3,262,478,678 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq31000 93.3 5e-14
seq23158 89.7 6e-13
seq1013 87.8 2e-12
>seq31000
Length=33412
Score = 93.3 bits (102), Expect = 5e-14
Identities = 134/188 (71%), Gaps = 1/188 (1%)
Strand=Plus/Plus
Query 118707 AGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATT 118766
||||| | ||||||| ||| || || | ||||||||| | |||||| | ||||
Sbjct 21723 AGGGCTAAAGACGCCAAATTGCAAACGGCCGTCTCATCCGGCGAACTGTACTGCACAATT 21782
Query 118767 TCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTA 118826
|| | ||| | || || | | ||||||||||||| || || || || | ||
Sbjct 21783 TCTGAGCAGAGATTACTACACGTGATGGTGCCCAAGTGACGCTGGTTCGATTTGGCATTG 21842
Query 118827 CACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCC 118886
||||| |||||| |||||||| ||||| ||||| ||| |||| || |||||||| ||
Sbjct 21843 CACGC-GACTTGTAGAGCATGTACGGCGTTCCCGTTTCCATTTGCGATTTGAGAATGGCT 21901
Query 118887 TTCCAGAC 118894
||||| ||
Sbjct 21902 TTCCACAC 21909
>seq23158
Length=28319
Score = 89.7 bits (98), Expect = 6e-13
Identities = 82/104 (79%), Gaps = 0/104 (0%)
Strand=Plus/Plus
Query 118791 ATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTAT 118850
|||||||| | || || || ||||| | ||| ||||| |||||||||||||||||
Sbjct 5831 ATGGTGCCTAGGTGACGCTGGTTGGACTTGGCGTTGCACGCGTCCTTGTAAAGCATGTAC 5890
Query 118851 GGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGAC 118894
||||| ||||| ||||| || || ||||| || || ||||||||
Sbjct 5891 GGCGTTCCCGTTTCCGTCTGCGATTTGAGGATGGCATTCCAGAC 5934
>seq1013
Length=399926
Score = 87.8 bits (96), Expect = 2e-12
Identities = 225/340 (66%), Gaps = 12/340 (4%)
Strand=Plus/Minus
Query 14015 AAAATCTTCTCGCGACCGCGCACACTGGGTAGGGACACGGTGATCTTACGATCAAAGCGA 14074
|| || |||||||| || | | ||||| || | || |||| || ||||| |||
Sbjct 291129 AATATTTTCTCGCGCCCATTTATATCGGGTAAAGAAATAGTAATCTGCCGGTCAAAACGA 291070
Query 14075 CCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTTCGTCGCCGCGATGACAACG 14134
|| || | || || || || | || ||| ||||| ||||| || || | |
Sbjct 291069 CCAGGCCTAAGCAGTGCTGGATCTAAGACATCCGGACGGTTAGTCGCAGCAATTATTATT 291010
Query 14135 ATGCCCGTCTCGTTA---TCAAAGCCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGT 14191
| |||| || ||| |||||||||||||||||| || | ||||| | ||||||
Sbjct 291009 ACGCCC---TCATTAGACTCAAAGCCATCCATCTCAACTAATAACTGATTTAATGTTTGT 290953
Query 14192 TCGCGTTCATCATTCGCAGGCATACCACCCGCACTG---CGTTGCTTACCGACGGCGTCA 14248
|| | ||||||||| || |||| || || || || |||| || || ||
Sbjct 290952 TCTCTTTCATCATTACCA---CCACCAAGACCAATGCCACGATGTCTACCCACCGCATCT 290896
Query 14249 ATTTCATCGATGAAAACGATACATGGTTGATTTTCACGGGCAACTTCAAAGATATCTCGC 14308
|| ||||| || |||| ||||| || ||||| | | ||||| ||||| ||
Sbjct 290895 ATCTCATCTATAAAAATTATACAAGGAGCATTTTTCTTGCCTTGATCAAACATATCACGA 290836
Query 14309 ACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAAT 14348
|| | | ||||| ||||| ||||||||||| |||||||
Sbjct 290835 ACACGGCTCGCACCAACACCAACAAACATCTCAACAAAAT 290796
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 617324606337400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |