Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loxosceles_20reclusa_20[genbank_20GCA_5F001188405.1_202015-04-27] 143,665 sequences; 3,262,478,678 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq31000 93.3 5e-14 seq23158 89.7 6e-13 seq1013 87.8 2e-12 >seq31000 Length=33412 Score = 93.3 bits (102), Expect = 5e-14 Identities = 134/188 (71%), Gaps = 1/188 (1%) Strand=Plus/Plus Query 118707 AGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATT 118766 ||||| | ||||||| ||| || || | ||||||||| | |||||| | |||| Sbjct 21723 AGGGCTAAAGACGCCAAATTGCAAACGGCCGTCTCATCCGGCGAACTGTACTGCACAATT 21782 Query 118767 TCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTA 118826 || | ||| | || || | | ||||||||||||| || || || || | || Sbjct 21783 TCTGAGCAGAGATTACTACACGTGATGGTGCCCAAGTGACGCTGGTTCGATTTGGCATTG 21842 Query 118827 CACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCC 118886 ||||| |||||| |||||||| ||||| ||||| ||| |||| || |||||||| || Sbjct 21843 CACGC-GACTTGTAGAGCATGTACGGCGTTCCCGTTTCCATTTGCGATTTGAGAATGGCT 21901 Query 118887 TTCCAGAC 118894 ||||| || Sbjct 21902 TTCCACAC 21909 >seq23158 Length=28319 Score = 89.7 bits (98), Expect = 6e-13 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 118791 ATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTAT 118850 |||||||| | || || || ||||| | ||| ||||| ||||||||||||||||| Sbjct 5831 ATGGTGCCTAGGTGACGCTGGTTGGACTTGGCGTTGCACGCGTCCTTGTAAAGCATGTAC 5890 Query 118851 GGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGAC 118894 ||||| ||||| ||||| || || ||||| || || |||||||| Sbjct 5891 GGCGTTCCCGTTTCCGTCTGCGATTTGAGGATGGCATTCCAGAC 5934 >seq1013 Length=399926 Score = 87.8 bits (96), Expect = 2e-12 Identities = 225/340 (66%), Gaps = 12/340 (4%) Strand=Plus/Minus Query 14015 AAAATCTTCTCGCGACCGCGCACACTGGGTAGGGACACGGTGATCTTACGATCAAAGCGA 14074 || || |||||||| || | | ||||| || | || |||| || ||||| ||| Sbjct 291129 AATATTTTCTCGCGCCCATTTATATCGGGTAAAGAAATAGTAATCTGCCGGTCAAAACGA 291070 Query 14075 CCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTTCGTCGCCGCGATGACAACG 14134 || || | || || || || | || ||| ||||| ||||| || || | | Sbjct 291069 CCAGGCCTAAGCAGTGCTGGATCTAAGACATCCGGACGGTTAGTCGCAGCAATTATTATT 291010 Query 14135 ATGCCCGTCTCGTTA---TCAAAGCCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGT 14191 | |||| || ||| |||||||||||||||||| || | ||||| | |||||| Sbjct 291009 ACGCCC---TCATTAGACTCAAAGCCATCCATCTCAACTAATAACTGATTTAATGTTTGT 290953 Query 14192 TCGCGTTCATCATTCGCAGGCATACCACCCGCACTG---CGTTGCTTACCGACGGCGTCA 14248 || | ||||||||| || |||| || || || || |||| || || || Sbjct 290952 TCTCTTTCATCATTACCA---CCACCAAGACCAATGCCACGATGTCTACCCACCGCATCT 290896 Query 14249 ATTTCATCGATGAAAACGATACATGGTTGATTTTCACGGGCAACTTCAAAGATATCTCGC 14308 || ||||| || |||| ||||| || ||||| | | ||||| ||||| || Sbjct 290895 ATCTCATCTATAAAAATTATACAAGGAGCATTTTTCTTGCCTTGATCAAACATATCACGA 290836 Query 14309 ACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAAT 14348 || | | ||||| ||||| ||||||||||| ||||||| Sbjct 290835 ACACGGCTCGCACCAACACCAACAAACATCTCAACAAAAT 290796 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 617324606337400