Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loxosceles_20reclusa_20[genbank_20GCA_5F001188405.1_202015-04-27] 143,665 sequences; 3,262,478,678 total letters Query= NC_028099.1 Length=122522 Score E Sequences producing significant alignments: (Bits) Value seq454 102 6e-17 seq19790 84.2 2e-11 >seq454 Length=212681 Score = 102 bits (112), Expect = 6e-17 Identities = 151/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 111670 TTTGGAAAGGGGGTAGGCTTTCGGGTAAGCTGTAATTGTAAAGGCTGTATGTGATTTAAA 111729 |||||||| | ||||||||| || | ||| | || | | ||||| |||||| Sbjct 93069 TTTGGAAATGCTCTAGGCTTTCTAGTTATCTGCTCCTTCAATGTATCAATGTGGTTTAAA 93010 Query 111730 TAAACATGCGCATCTCCTATACAATGGATCAATTCCCAAGGCTCCAAACCAGTGATGTGT 111789 || | || ||||| |||| |||| || || | ||| | | |||||| ||| Sbjct 93009 TATATGTGAGCATCCCCTAATGTGTGGACAAAATCTCCAGGTTTGAGGTCAGTGACATGT 92950 Query 111790 GCAATCATGTATGTGAGTAGACTGTAACTAGCAATGTTAAATGGCACACCTAGGCCCATA 111849 || ||||||| ||| | || || ||||||||||||||||| ||||||| |||||| Sbjct 92949 GCGATCATGTGTGTCAAAAGGGCATAGCTAGCAATGTTAAATGGTACACCTAAACCCATA 92890 Query 111850 TCTCCCGATCTTTGATATAGCTGACATGATAGTT 111883 || || || ||||| || | ||||||||||||| Sbjct 92889 TCGCCAGACCTTTGGTACAATTGACATGATAGTT 92856 >seq19790 Length=54031 Score = 84.2 bits (92), Expect = 2e-11 Identities = 118/166 (71%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 111718 ATGTGATTTAAATAAACATGCGCATCTCCTATACAATGGATCAATTCCCAAGGCTCCAAA 111777 || || || | ||| | || ||||||||||| ||||| || || | ||| | | Sbjct 16795 ATATGGTTCAGATATATGTGAGCATCTCCTATTGTATGGACAAAATCTCCAGGTTTGAGG 16736 Query 111778 CCAGTGATGTGTGCAATCATGTATGTGAGTAGACTGTAACTAGCAATGTTAAATGGCACA 111837 ||||| ||||| ||||||| ||| | || || ||||||||||||||||||||| Sbjct 16735 TTAGTGACATGTGCGATCATGTGTGTCAAAAGGGCATAGCTAGCAATGTTAAATGGCACA 16676 Query 111838 CCTAGGCCCATATCTCCCGATCTTTGATATAGCTGACATGATAGTT 111883 ||| |||||||| | | ||| | || | ||||||||||||| Sbjct 16675 CCTCAACCCATATCAGCATACCTTAGGTACATTTGACATGATAGTT 16630 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 391259335712395