Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Loxosceles_20reclusa_20[genbank_20GCA_5F001188405.1_202015-04-27]
143,665 sequences; 3,262,478,678 total letters
Query= NC_028108.1
Length=171454
Score E
Sequences producing significant alignments: (Bits) Value
seq1004 129 6e-25
seq15708 123 3e-23
seq7405 98.7 1e-15
seq52744 95.1 1e-14
seq28800 89.7 6e-13
seq43322 87.8 2e-12
seq16152 84.2 2e-11
seq5901 82.4 8e-11
>seq1004
Length=176236
Score = 129 bits (142), Expect = 6e-25
Identities = 134/176 (76%), Gaps = 0/176 (0%)
Strand=Plus/Minus
Query 78199 TAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACTCGACAGCTTG 78258
|||||||||||||||||||| ||| |||||| ||||| | |||||| |||| ||| |||
Sbjct 32071 TAGTACATGCCCGTCTTGAGTCCCAACTTCCAACCGTAAAAGTGCATGCTCGTCAGTTTG 32012
Query 78259 GCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGATGTACGCACCG 78318
|| ||||| | ||||| | ||||| | |||||| ||| ||||| | | ||||
Sbjct 32011 GCTTCGCTCGGATCTGCCATGTACATGTTCATCGACTGACTCTGATCGATAAATGGACCG 31952
Query 78319 CGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGATGGTCCGGTA 78374
|| ||||||||||| | | | || |||||||||||| ||||| | ||| || ||
Sbjct 31951 CGATCGGCCGCCATCTTCAGTAGCGTCTTTTGCGGAATTTCCCACACGGTGCGATA 31896
Score = 100 bits (110), Expect = 3e-16
Identities = 150/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 20636 ACCGTATGGGAAATCCCACAGAAGAGCATCATCGACATGGCGGCCGATCGCGGCGCCTAC 20695
||||| |||||||| || || |||| | | | ||||||||||||||||| | |
Sbjct 31902 ACCGTGTGGGAAATTCCGCAAAAGACGCTACTGAAGATGGCGGCCGATCGCGGTCCATTT 31961
Query 20696 ATCGACCAGTCCCAGTCGCTCAATGTCTTCATGGAGAATCCGAGCCTGGCGAAGCTGAGC 20755
||||| ||| |||||| | || | | ||||| |||||||| || || ||||
Sbjct 31962 ATCGATCAGAGTCAGTCGATGAACATGTACATGGCAGATCCGAGCGAAGCCAAACTGACG 32021
Query 20756 TCCATGCATATGTACGGCTGGCACAAGGGGCTCAAGACGGGCATGTACTATCTGCGGACC 20815
|||||| | ||||| ||| | ||| |||||||||||||||||||| || |||| |
Sbjct 32022 AGCATGCACTTTTACGGTTGGAAGTTGGGACTCAAGACGGGCATGTACTACCTCCGGAAC 32081
Query 20816 CGAGCCAAGGCCAAGGCGCAGCAGGTTACCGTG 20848
| | || || || ||||| ||||||||
Sbjct 32082 AAACCGGCAGCGAACGCCGAGCAGTTTACCGTG 32114
>seq15708
Length=44177
Score = 123 bits (136), Expect = 3e-23
Identities = 133/176 (76%), Gaps = 0/176 (0%)
Strand=Plus/Plus
Query 78199 TAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACTCGACAGCTTG 78258
|||||||||||||||||||| || |||||| ||||| | |||||| |||| ||| |||
Sbjct 33835 TAGTACATGCCCGTCTTGAGTCCTAACTTCCAACCGTAAAAGTGCATGCTCGTCAGTTTG 33894
Query 78259 GCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGATGTACGCACCG 78318
|| ||||| | | ||||| | | ||| | |||||| ||| ||||| | | ||||
Sbjct 33895 GCTTCGCTCGGATCCGCCATGTACACGTTCATCGACTGACTCTGATCGATAAATGGACCG 33954
Query 78319 CGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGATGGTCCGGTA 78374
|| ||||||||||| | | | || |||||||||||| ||||| | ||| || ||
Sbjct 33955 CGATCGGCCGCCATCTTCAGCAGCGTCTTTTGCGGAATTTCCCACACGGTGCGATA 34010
Score = 100 bits (110), Expect = 3e-16
Identities = 129/178 (72%), Gaps = 0/178 (0%)
Strand=Plus/Minus
Query 20636 ACCGTATGGGAAATCCCACAGAAGAGCATCATCGACATGGCGGCCGATCGCGGCGCCTAC 20695
||||| |||||||| || || |||| | | | ||||||||||||||||| | |
Sbjct 34004 ACCGTGTGGGAAATTCCGCAAAAGACGCTGCTGAAGATGGCGGCCGATCGCGGTCCATTT 33945
Query 20696 ATCGACCAGTCCCAGTCGCTCAATGTCTTCATGGAGAATCCGAGCCTGGCGAAGCTGAGC 20755
||||| ||| |||||| | || || | ||||| | |||||||| || || ||||
Sbjct 33944 ATCGATCAGAGTCAGTCGATGAACGTGTACATGGCGGATCCGAGCGAAGCCAAACTGACG 33885
Query 20756 TCCATGCATATGTACGGCTGGCACAAGGGGCTCAAGACGGGCATGTACTATCTGCGGA 20813
|||||| | ||||| ||| | || |||||||||||||||||||| || ||||
Sbjct 33884 AGCATGCACTTTTACGGTTGGAAGTTAGGACTCAAGACGGGCATGTACTACCTCCGGA 33827
>seq7405
Length=74570
Score = 98.7 bits (108), Expect = 1e-15
Identities = 120/164 (73%), Gaps = 0/164 (0%)
Strand=Plus/Plus
Query 78199 TAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACTCGACAGCTTG 78258
|||||||||||||||||||| ||| |||||| ||||| | |||||| ||| || |||
Sbjct 57549 TAGTACATGCCCGTCTTGAGTCCCAACTTCCAACCGTAAAAGTGCATGTTCGTCAATTTG 57608
Query 78259 GCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGATGTACGCACCG 78318
|| ||||| | | |||| | | ||| | |||||| ||| ||||| | || |||
Sbjct 57609 GCTTCTCTCGGATCCGCCATTTACACGTTCATCGACTGACTCTGATCGATAAAAGCGCCG 57668
Query 78319 CGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCA 78362
|| ||||| ||||| | | | || ||||||||||| || ||
Sbjct 57669 CGATCGGCTGCCATCTTCAGTAGCGTTTTTTGCGGAATTTCTCA 57712
Score = 86.0 bits (94), Expect = 7e-12
Identities = 104/142 (73%), Gaps = 0/142 (0%)
Strand=Plus/Minus
Query 20672 ATGGCGGCCGATCGCGGCGCCTACATCGACCAGTCCCAGTCGCTCAATGTCTTCATGGAG 20731
||||| |||||||||||||| | ||||| ||| |||||| | || || | |||| |
Sbjct 57682 ATGGCAGCCGATCGCGGCGCTTTTATCGATCAGAGTCAGTCGATGAACGTGTAAATGGCG 57623
Query 20732 AATCCGAGCCTGGCGAAGCTGAGCTCCATGCATATGTACGGCTGGCACAAGGGGCTCAAG 20791
||||||| || || ||| |||||| | ||||| ||| | ||| ||||||
Sbjct 57622 GATCCGAGAGAAGCCAAATTGACGAACATGCACTTTTACGGTTGGAAGTTGGGACTCAAG 57563
Query 20792 ACGGGCATGTACTATCTGCGGA 20813
|||||||||||||| || ||||
Sbjct 57562 ACGGGCATGTACTACCTCCGGA 57541
>seq52744
Length=12040
Score = 95.1 bits (104), Expect = 1e-14
Identities = 152/218 (70%), Gaps = 3/218 (1%)
Strand=Plus/Plus
Query 78199 TAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACTCGACAGCTTG 78258
||||||||||||||||| || || |||||| ||||| | ||||| |||| ||| |||
Sbjct 3286 TAGTACATGCCCGTCTTCAGTCCTAACTTCCAACCGTAAAAATGCATGCTCGTCAGTTTG 3345
Query 78259 GCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGATGTACGCACCG 78318
|| ||||| | | ||||| | | ||| | ||| || || || || | || ||
Sbjct 3346 GCTTCGCTCGGCTCCGCCATGTACACGTTCATCGATTGACTTTGATCAATAAAAGCGCCA 3405
Query 78319 CGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGATGGTCCGGTAAATG 78378
|| ||||| ||||| | | | || |||||||||||| ||||| | || || || |
Sbjct 3406 CGATCGGCTGCCATTTTCAACAGCGTCTTTTGCGGAATTTCCCACACAGTACGATATAAC 3465
Query 78379 GCCTTCAGCTCTTCCTGGAT---GTCCAGCGCTTGTAC 78413
||||| |||||| | || ||||| ||||| ||
Sbjct 3466 CGCTTCACATCTTCCGGTATTGCGTCCACGGCTTGAAC 3503
>seq28800
Length=31993
Score = 89.7 bits (98), Expect = 6e-13
Identities = 126/176 (72%), Gaps = 2/176 (1%)
Strand=Plus/Minus
Query 20637 CCGTATGGGAAATCCCACAGAAGAGCATCATCGACATGGCGGCCGATCGCGGCGCCTACA 20696
|||| ||||||| ||||| |||| | | | ||||||||| |||||||||| | |
Sbjct 5845 CCGTGTGGGAAACGCCACAAAAGACGCTGTTGAAAATGGCGGCCAATCGCGGCGCTTTTA 5786
Query 20697 TCGACCAGTCCCAGTCGCTCAATGTCTTCATGGAGAATCCGAGCCTGGCGAAGCTGAGCT 20756
|||| ||| |||||| | || || | ||||||| |||||||| || || || |
Sbjct 5785 TCGATCAGAGTCAGTCGATGAACGTGTACATGGAGGATCCGAGCGAAGCCAAACTAACGA 5726
Query 20757 CCATGCATATGTACGGCTGGCACAAGGGGCTCAAGACGGGCATGTACT--ATCTGC 20810
|||||| || ||||| ||| || || ||||||||||||||| ||||||
Sbjct 5725 GCATGCACATTTACGGTTGGGCGTTAGGACTAGAGACGGGCATGTACTACATCTGC 5670
Score = 84.2 bits (92), Expect = 2e-11
Identities = 117/164 (71%), Gaps = 0/164 (0%)
Strand=Plus/Plus
Query 78199 TAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACTCGACAGCTTG 78258
|||||||||||||||| || || | ||| ||||| | |||||| |||| || |||
Sbjct 5677 TAGTACATGCCCGTCTCTAGTCCTAACGCCCAACCGTAAATGTGCATGCTCGTTAGTTTG 5736
Query 78259 GCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGATGTACGCACCG 78318
|| ||||| | ||||||| | | ||| | |||||| ||| ||||| | || |||
Sbjct 5737 GCTTCGCTCGGATCCTCCATGTACACGTTCATCGACTGACTCTGATCGATAAAAGCGCCG 5796
Query 78319 CGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCA 78362
|| | ||||||||| | | | || |||||| || | |||||
Sbjct 5797 CGATTGGCCGCCATTTTCAACAGCGTCTTTTGTGGCGTTTCCCA 5840
>seq43322
Length=19939
Score = 87.8 bits (96), Expect = 2e-12
Identities = 127/177 (72%), Gaps = 2/177 (1%)
Strand=Plus/Plus
Query 20636 ACCGTATGGGAAATCCCACAGAAGAGCATCATCGACA-TGGCGGCCGATCGCGGCGCCTA 20694
||||| || ||| | || || |||| ||| | || | |||| |||||||| |||| |
Sbjct 13655 ACCGTGTGAGAATTTCCGCAAAAGA-CATTGTTGAAAATGGCAGCCGATCGTAGCGCTTT 13713
Query 20695 CATCGACCAGTCCCAGTCGCTCAATGTCTTCATGGAGAATCCGAGCCTGGCGAAGCTGAG 20754
|| || ||| | || ||| | || || | |||||||||||||||| || || ||||
Sbjct 13714 TATTGATCAGACTCAATCGATGAACGTGTACATGGAGAATCCGAGCGAAGCCAAACTGAC 13773
Query 20755 CTCCATGCATATGTACGGCTGGCACAAGGGGCTCAAGACGGGCATGTACTATCTGCG 20811
||||||| | ||||| ||| | || || |||||||||| |||||| || ||
Sbjct 13774 GAGCATGCATTTTTACGGTTGGGAGTTAGGACTGAAGACGGGCAGGTACTACCTCCG 13830
Score = 84.2 bits (92), Expect = 2e-11
Identities = 124/176 (70%), Gaps = 0/176 (0%)
Strand=Plus/Minus
Query 78199 TAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACTCGACAGCTTG 78258
|||||| |||||||||| || || || ||| ||||| | ||||| |||| ||| |||
Sbjct 13824 TAGTACCTGCCCGTCTTCAGTCCTAACTCCCAACCGTAAAAATGCATGCTCGTCAGTTTG 13765
Query 78259 GCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGATGTACGCACCG 78318
|| ||||| ||||||||| | | ||| | ||| || | ||| || || | || |
Sbjct 13764 GCTTCGCTCGGATTCTCCATGTACACGTTCATCGATTGAGTCTGATCAATAAAAGCGCTA 13705
Query 78319 CGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGATGGTCCGGTA 78374
|| ||||| ||||| | | | | ||||||||||| || || | ||| || ||
Sbjct 13704 CGATCGGCTGCCATTTTCAACAATGTCTTTTGCGGAAATTCTCACACGGTGCGATA 13649
>seq16152
Length=64332
Score = 84.2 bits (92), Expect = 2e-11
Identities = 115/161 (71%), Gaps = 0/161 (0%)
Strand=Plus/Minus
Query 78199 TAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACTCGACAGCTTG 78258
||||||||||||||||| || || | ||| ||||| | |||||| | || ||| |||
Sbjct 47416 TAGTACATGCCCGTCTTCAGTCCTAACGCCCAACCGTAAAAGTGCATGCCCGTCAGTTTG 47357
Query 78259 GCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGATGTACGCACCG 78318
|| ||| | | | ||||| | | ||| | |||||| ||| || || | |||||
Sbjct 47356 GCTTCGCTCAGATCCGCCATGTACACGTTCATCGACTGACTCTGATCAATAAAAGCACCA 47297
Query 78319 CGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTC 78359
|| || |||||||| | | | || |||||||||||| ||
Sbjct 47296 CGATCTGCCGCCATTTTCAAAAGCGTCTTTTGCGGAATTTC 47256
>seq5901
Length=104132
Score = 82.4 bits (90), Expect = 8e-11
Identities = 149/218 (68%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 59901 GCCATAGAGACGTCCCCCGCAGTTAAACAAAAAGCAGAATGGGCCATGCAGTGGATGAGT 59960
||||| || |||| |||| ||| | | || ||||||||||| | | ||||| |
Sbjct 21021 GCCATTGAAACGTTCCCCTGCGTTCGAAAGAAGGCAGAATGGGCTCTCAACTGGATTCGG 20962
Query 59961 CCTGGAGCATCATTTGCACAACGTCTCATAGCTTTTGCATGCGTGGAAGGAATCTTCTTC 60020
|| | | || | | ||||||| | ||||| || |||||||| | ||||||
Sbjct 20961 CCCGACTCGTCCCTCGGCGAACGTCTGCTCGCTTTCGCCATAGTGGAAGGCGTGTTCTTC 20902
Query 60021 TCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGT 60080
|| || |||||| || || ||||||||||| ||| | || || |||| || |||
Sbjct 20901 TCGGGATCGTTCGCAGCCATCTTCTGGCTCAAGAAGAGAGGGCTGCTGCCCGGTTTGACG 20842
Query 60081 TTCTCCAACGAGCTGATTTCCCGGGACGAGGGCCTCCA 60118
||| ||||||| | || || ||||| ||||||||
Sbjct 20841 TTCAGCAACGAGTTCATCAGTCGAGACGAAGGCCTCCA 20804
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547539752307600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |