Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loxosceles_20reclusa_20[genbank_20GCA_5F001188405.1_202015-04-27] 143,665 sequences; 3,262,478,678 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq1004 129 6e-25 seq15708 123 3e-23 seq7405 98.7 1e-15 seq52744 95.1 1e-14 seq28800 89.7 6e-13 seq43322 87.8 2e-12 seq16152 84.2 2e-11 seq5901 82.4 8e-11 >seq1004 Length=176236 Score = 129 bits (142), Expect = 6e-25 Identities = 134/176 (76%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 78199 TAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACTCGACAGCTTG 78258 |||||||||||||||||||| ||| |||||| ||||| | |||||| |||| ||| ||| Sbjct 32071 TAGTACATGCCCGTCTTGAGTCCCAACTTCCAACCGTAAAAGTGCATGCTCGTCAGTTTG 32012 Query 78259 GCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGATGTACGCACCG 78318 || ||||| | ||||| | ||||| | |||||| ||| ||||| | | |||| Sbjct 32011 GCTTCGCTCGGATCTGCCATGTACATGTTCATCGACTGACTCTGATCGATAAATGGACCG 31952 Query 78319 CGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGATGGTCCGGTA 78374 || ||||||||||| | | | || |||||||||||| ||||| | ||| || || Sbjct 31951 CGATCGGCCGCCATCTTCAGTAGCGTCTTTTGCGGAATTTCCCACACGGTGCGATA 31896 Score = 100 bits (110), Expect = 3e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 20636 ACCGTATGGGAAATCCCACAGAAGAGCATCATCGACATGGCGGCCGATCGCGGCGCCTAC 20695 ||||| |||||||| || || |||| | | | ||||||||||||||||| | | Sbjct 31902 ACCGTGTGGGAAATTCCGCAAAAGACGCTACTGAAGATGGCGGCCGATCGCGGTCCATTT 31961 Query 20696 ATCGACCAGTCCCAGTCGCTCAATGTCTTCATGGAGAATCCGAGCCTGGCGAAGCTGAGC 20755 ||||| ||| |||||| | || | | ||||| |||||||| || || |||| Sbjct 31962 ATCGATCAGAGTCAGTCGATGAACATGTACATGGCAGATCCGAGCGAAGCCAAACTGACG 32021 Query 20756 TCCATGCATATGTACGGCTGGCACAAGGGGCTCAAGACGGGCATGTACTATCTGCGGACC 20815 |||||| | ||||| ||| | ||| |||||||||||||||||||| || |||| | Sbjct 32022 AGCATGCACTTTTACGGTTGGAAGTTGGGACTCAAGACGGGCATGTACTACCTCCGGAAC 32081 Query 20816 CGAGCCAAGGCCAAGGCGCAGCAGGTTACCGTG 20848 | | || || || ||||| |||||||| Sbjct 32082 AAACCGGCAGCGAACGCCGAGCAGTTTACCGTG 32114 >seq15708 Length=44177 Score = 123 bits (136), Expect = 3e-23 Identities = 133/176 (76%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 78199 TAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACTCGACAGCTTG 78258 |||||||||||||||||||| || |||||| ||||| | |||||| |||| ||| ||| Sbjct 33835 TAGTACATGCCCGTCTTGAGTCCTAACTTCCAACCGTAAAAGTGCATGCTCGTCAGTTTG 33894 Query 78259 GCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGATGTACGCACCG 78318 || ||||| | | ||||| | | ||| | |||||| ||| ||||| | | |||| Sbjct 33895 GCTTCGCTCGGATCCGCCATGTACACGTTCATCGACTGACTCTGATCGATAAATGGACCG 33954 Query 78319 CGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGATGGTCCGGTA 78374 || ||||||||||| | | | || |||||||||||| ||||| | ||| || || Sbjct 33955 CGATCGGCCGCCATCTTCAGCAGCGTCTTTTGCGGAATTTCCCACACGGTGCGATA 34010 Score = 100 bits (110), Expect = 3e-16 Identities = 129/178 (72%), Gaps = 0/178 (0%) Strand=Plus/Minus Query 20636 ACCGTATGGGAAATCCCACAGAAGAGCATCATCGACATGGCGGCCGATCGCGGCGCCTAC 20695 ||||| |||||||| || || |||| | | | ||||||||||||||||| | | Sbjct 34004 ACCGTGTGGGAAATTCCGCAAAAGACGCTGCTGAAGATGGCGGCCGATCGCGGTCCATTT 33945 Query 20696 ATCGACCAGTCCCAGTCGCTCAATGTCTTCATGGAGAATCCGAGCCTGGCGAAGCTGAGC 20755 ||||| ||| |||||| | || || | ||||| | |||||||| || || |||| Sbjct 33944 ATCGATCAGAGTCAGTCGATGAACGTGTACATGGCGGATCCGAGCGAAGCCAAACTGACG 33885 Query 20756 TCCATGCATATGTACGGCTGGCACAAGGGGCTCAAGACGGGCATGTACTATCTGCGGA 20813 |||||| | ||||| ||| | || |||||||||||||||||||| || |||| Sbjct 33884 AGCATGCACTTTTACGGTTGGAAGTTAGGACTCAAGACGGGCATGTACTACCTCCGGA 33827 >seq7405 Length=74570 Score = 98.7 bits (108), Expect = 1e-15 Identities = 120/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 78199 TAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACTCGACAGCTTG 78258 |||||||||||||||||||| ||| |||||| ||||| | |||||| ||| || ||| Sbjct 57549 TAGTACATGCCCGTCTTGAGTCCCAACTTCCAACCGTAAAAGTGCATGTTCGTCAATTTG 57608 Query 78259 GCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGATGTACGCACCG 78318 || ||||| | | |||| | | ||| | |||||| ||| ||||| | || ||| Sbjct 57609 GCTTCTCTCGGATCCGCCATTTACACGTTCATCGACTGACTCTGATCGATAAAAGCGCCG 57668 Query 78319 CGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCA 78362 || ||||| ||||| | | | || ||||||||||| || || Sbjct 57669 CGATCGGCTGCCATCTTCAGTAGCGTTTTTTGCGGAATTTCTCA 57712 Score = 86.0 bits (94), Expect = 7e-12 Identities = 104/142 (73%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 20672 ATGGCGGCCGATCGCGGCGCCTACATCGACCAGTCCCAGTCGCTCAATGTCTTCATGGAG 20731 ||||| |||||||||||||| | ||||| ||| |||||| | || || | |||| | Sbjct 57682 ATGGCAGCCGATCGCGGCGCTTTTATCGATCAGAGTCAGTCGATGAACGTGTAAATGGCG 57623 Query 20732 AATCCGAGCCTGGCGAAGCTGAGCTCCATGCATATGTACGGCTGGCACAAGGGGCTCAAG 20791 ||||||| || || ||| |||||| | ||||| ||| | ||| |||||| Sbjct 57622 GATCCGAGAGAAGCCAAATTGACGAACATGCACTTTTACGGTTGGAAGTTGGGACTCAAG 57563 Query 20792 ACGGGCATGTACTATCTGCGGA 20813 |||||||||||||| || |||| Sbjct 57562 ACGGGCATGTACTACCTCCGGA 57541 >seq52744 Length=12040 Score = 95.1 bits (104), Expect = 1e-14 Identities = 152/218 (70%), Gaps = 3/218 (1%) Strand=Plus/Plus Query 78199 TAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACTCGACAGCTTG 78258 ||||||||||||||||| || || |||||| ||||| | ||||| |||| ||| ||| Sbjct 3286 TAGTACATGCCCGTCTTCAGTCCTAACTTCCAACCGTAAAAATGCATGCTCGTCAGTTTG 3345 Query 78259 GCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGATGTACGCACCG 78318 || ||||| | | ||||| | | ||| | ||| || || || || | || || Sbjct 3346 GCTTCGCTCGGCTCCGCCATGTACACGTTCATCGATTGACTTTGATCAATAAAAGCGCCA 3405 Query 78319 CGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGATGGTCCGGTAAATG 78378 || ||||| ||||| | | | || |||||||||||| ||||| | || || || | Sbjct 3406 CGATCGGCTGCCATTTTCAACAGCGTCTTTTGCGGAATTTCCCACACAGTACGATATAAC 3465 Query 78379 GCCTTCAGCTCTTCCTGGAT---GTCCAGCGCTTGTAC 78413 ||||| |||||| | || ||||| ||||| || Sbjct 3466 CGCTTCACATCTTCCGGTATTGCGTCCACGGCTTGAAC 3503 >seq28800 Length=31993 Score = 89.7 bits (98), Expect = 6e-13 Identities = 126/176 (72%), Gaps = 2/176 (1%) Strand=Plus/Minus Query 20637 CCGTATGGGAAATCCCACAGAAGAGCATCATCGACATGGCGGCCGATCGCGGCGCCTACA 20696 |||| ||||||| ||||| |||| | | | ||||||||| |||||||||| | | Sbjct 5845 CCGTGTGGGAAACGCCACAAAAGACGCTGTTGAAAATGGCGGCCAATCGCGGCGCTTTTA 5786 Query 20697 TCGACCAGTCCCAGTCGCTCAATGTCTTCATGGAGAATCCGAGCCTGGCGAAGCTGAGCT 20756 |||| ||| |||||| | || || | ||||||| |||||||| || || || | Sbjct 5785 TCGATCAGAGTCAGTCGATGAACGTGTACATGGAGGATCCGAGCGAAGCCAAACTAACGA 5726 Query 20757 CCATGCATATGTACGGCTGGCACAAGGGGCTCAAGACGGGCATGTACT--ATCTGC 20810 |||||| || ||||| ||| || || ||||||||||||||| |||||| Sbjct 5725 GCATGCACATTTACGGTTGGGCGTTAGGACTAGAGACGGGCATGTACTACATCTGC 5670 Score = 84.2 bits (92), Expect = 2e-11 Identities = 117/164 (71%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 78199 TAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACTCGACAGCTTG 78258 |||||||||||||||| || || | ||| ||||| | |||||| |||| || ||| Sbjct 5677 TAGTACATGCCCGTCTCTAGTCCTAACGCCCAACCGTAAATGTGCATGCTCGTTAGTTTG 5736 Query 78259 GCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGATGTACGCACCG 78318 || ||||| | ||||||| | | ||| | |||||| ||| ||||| | || ||| Sbjct 5737 GCTTCGCTCGGATCCTCCATGTACACGTTCATCGACTGACTCTGATCGATAAAAGCGCCG 5796 Query 78319 CGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCA 78362 || | ||||||||| | | | || |||||| || | ||||| Sbjct 5797 CGATTGGCCGCCATTTTCAACAGCGTCTTTTGTGGCGTTTCCCA 5840 >seq43322 Length=19939 Score = 87.8 bits (96), Expect = 2e-12 Identities = 127/177 (72%), Gaps = 2/177 (1%) Strand=Plus/Plus Query 20636 ACCGTATGGGAAATCCCACAGAAGAGCATCATCGACA-TGGCGGCCGATCGCGGCGCCTA 20694 ||||| || ||| | || || |||| ||| | || | |||| |||||||| |||| | Sbjct 13655 ACCGTGTGAGAATTTCCGCAAAAGA-CATTGTTGAAAATGGCAGCCGATCGTAGCGCTTT 13713 Query 20695 CATCGACCAGTCCCAGTCGCTCAATGTCTTCATGGAGAATCCGAGCCTGGCGAAGCTGAG 20754 || || ||| | || ||| | || || | |||||||||||||||| || || |||| Sbjct 13714 TATTGATCAGACTCAATCGATGAACGTGTACATGGAGAATCCGAGCGAAGCCAAACTGAC 13773 Query 20755 CTCCATGCATATGTACGGCTGGCACAAGGGGCTCAAGACGGGCATGTACTATCTGCG 20811 ||||||| | ||||| ||| | || || |||||||||| |||||| || || Sbjct 13774 GAGCATGCATTTTTACGGTTGGGAGTTAGGACTGAAGACGGGCAGGTACTACCTCCG 13830 Score = 84.2 bits (92), Expect = 2e-11 Identities = 124/176 (70%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 78199 TAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACTCGACAGCTTG 78258 |||||| |||||||||| || || || ||| ||||| | ||||| |||| ||| ||| Sbjct 13824 TAGTACCTGCCCGTCTTCAGTCCTAACTCCCAACCGTAAAAATGCATGCTCGTCAGTTTG 13765 Query 78259 GCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGATGTACGCACCG 78318 || ||||| ||||||||| | | ||| | ||| || | ||| || || | || | Sbjct 13764 GCTTCGCTCGGATTCTCCATGTACACGTTCATCGATTGAGTCTGATCAATAAAAGCGCTA 13705 Query 78319 CGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGATGGTCCGGTA 78374 || ||||| ||||| | | | | ||||||||||| || || | ||| || || Sbjct 13704 CGATCGGCTGCCATTTTCAACAATGTCTTTTGCGGAAATTCTCACACGGTGCGATA 13649 >seq16152 Length=64332 Score = 84.2 bits (92), Expect = 2e-11 Identities = 115/161 (71%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 78199 TAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACTCGACAGCTTG 78258 ||||||||||||||||| || || | ||| ||||| | |||||| | || ||| ||| Sbjct 47416 TAGTACATGCCCGTCTTCAGTCCTAACGCCCAACCGTAAAAGTGCATGCCCGTCAGTTTG 47357 Query 78259 GCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGATGTACGCACCG 78318 || ||| | | | ||||| | | ||| | |||||| ||| || || | ||||| Sbjct 47356 GCTTCGCTCAGATCCGCCATGTACACGTTCATCGACTGACTCTGATCAATAAAAGCACCA 47297 Query 78319 CGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTC 78359 || || |||||||| | | | || |||||||||||| || Sbjct 47296 CGATCTGCCGCCATTTTCAAAAGCGTCTTTTGCGGAATTTC 47256 >seq5901 Length=104132 Score = 82.4 bits (90), Expect = 8e-11 Identities = 149/218 (68%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 59901 GCCATAGAGACGTCCCCCGCAGTTAAACAAAAAGCAGAATGGGCCATGCAGTGGATGAGT 59960 ||||| || |||| |||| ||| | | || ||||||||||| | | ||||| | Sbjct 21021 GCCATTGAAACGTTCCCCTGCGTTCGAAAGAAGGCAGAATGGGCTCTCAACTGGATTCGG 20962 Query 59961 CCTGGAGCATCATTTGCACAACGTCTCATAGCTTTTGCATGCGTGGAAGGAATCTTCTTC 60020 || | | || | | ||||||| | ||||| || |||||||| | |||||| Sbjct 20961 CCCGACTCGTCCCTCGGCGAACGTCTGCTCGCTTTCGCCATAGTGGAAGGCGTGTTCTTC 20902 Query 60021 TCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGT 60080 || || |||||| || || ||||||||||| ||| | || || |||| || ||| Sbjct 20901 TCGGGATCGTTCGCAGCCATCTTCTGGCTCAAGAAGAGAGGGCTGCTGCCCGGTTTGACG 20842 Query 60081 TTCTCCAACGAGCTGATTTCCCGGGACGAGGGCCTCCA 60118 ||| ||||||| | || || ||||| |||||||| Sbjct 20841 TTCAGCAACGAGTTCATCAGTCGAGACGAAGGCCTCCA 20804 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547539752307600