Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Loxosceles_20reclusa_20[genbank_20GCA_5F001188405.1_202015-04-27]
143,665 sequences; 3,262,478,678 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq15708 93.3 5e-14
seq1004 93.3 5e-14
seq7405 86.0 7e-12
>seq15708
Length=44177
Score = 93.3 bits (102), Expect = 5e-14
Identities = 131/184 (71%), Gaps = 0/184 (0%)
Strand=Plus/Minus
Query 55739 TACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGACATGAGTGCTGATCGTGGT 55798
|| || || |||||||| ||||| || |||| ||| | | ||| || ||||| |||
Sbjct 34010 TATCGCACCGTGTGGGAAATTCCGCAAAAGACGCTGCTGAAGATGGCGGCCGATCGCGGT 33951
Query 55799 GCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCTTCACTGGCCAAG 55858
| | ||||| ||| ||||| ||||| | | ||||| | |||| |||||
Sbjct 33950 CCATTTATCGATCAGAGTCAGTCGATGAACGTGTACATGGCGGATCCGAGCGAAGCCAAA 33891
Query 55859 TTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGTATGTACTATCTG 55918
||| |||||||||||||| |||||| |||||||||||||| |||||||| ||
Sbjct 33890 CTGACGAGCATGCACTTTTACGGTTGGAAGTTAGGACTCAAGACGGGCATGTACTACCTC 33831
Query 55919 CGGA 55922
||||
Sbjct 33830 CGGA 33827
>seq1004
Length=176236
Score = 93.3 bits (102), Expect = 5e-14
Identities = 131/184 (71%), Gaps = 0/184 (0%)
Strand=Plus/Plus
Query 55739 TACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGACATGAGTGCTGATCGTGGT 55798
|| || || |||||||| ||||| || |||| || | | ||| || ||||| |||
Sbjct 31896 TATCGCACCGTGTGGGAAATTCCGCAAAAGACGCTACTGAAGATGGCGGCCGATCGCGGT 31955
Query 55799 GCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCTTCACTGGCCAAG 55858
| | ||||| ||| ||||| ||||||| | ||||| |||| |||||
Sbjct 31956 CCATTTATCGATCAGAGTCAGTCGATGAACATGTACATGGCAGATCCGAGCGAAGCCAAA 32015
Query 55859 TTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGTATGTACTATCTG 55918
||| |||||||||||||| |||||| ||||||||||||||| |||||||| ||
Sbjct 32016 CTGACGAGCATGCACTTTTACGGTTGGAAGTTGGGACTCAAGACGGGCATGTACTACCTC 32075
Query 55919 CGGA 55922
||||
Sbjct 32076 CGGA 32079
>seq7405
Length=74570
Score = 86.0 bits (94), Expect = 7e-12
Identities = 124/175 (71%), Gaps = 0/175 (0%)
Strand=Plus/Minus
Query 55748 GTGTGGGAGATTCCACAGAAGAGTCTGATTGACATGAGTGCTGATCGTGGTGCGTACATC 55807
||||| || ||||| || || | || | | ||| || ||||| || || | |||
Sbjct 57715 GTGTGAGAAATTCCGCAAAAAACGCTACTGAAGATGGCAGCCGATCGCGGCGCTTTTATC 57656
Query 55808 GACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCTTCACTGGCCAAGTTGAGCTCG 55867
|| ||| ||||| ||||| | | |||| | |||| | ||||| ||||
Sbjct 57655 GATCAGAGTCAGTCGATGAACGTGTAAATGGCGGATCCGAGAGAAGCCAAATTGACGAAC 57596
Query 55868 ATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGTATGTACTATCTGCGGA 55922
|||||||||||||| |||||| ||||||||||||||| |||||||| || ||||
Sbjct 57595 ATGCACTTTTACGGTTGGAAGTTGGGACTCAAGACGGGCATGTACTACCTCCGGA 57541
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 546233302667000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |