Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loxosceles_20reclusa_20[genbank_20GCA_5F001188405.1_202015-04-27] 143,665 sequences; 3,262,478,678 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq15708 93.3 5e-14 seq1004 93.3 5e-14 seq7405 86.0 7e-12 >seq15708 Length=44177 Score = 93.3 bits (102), Expect = 5e-14 Identities = 131/184 (71%), Gaps = 0/184 (0%) Strand=Plus/Minus Query 55739 TACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGACATGAGTGCTGATCGTGGT 55798 || || || |||||||| ||||| || |||| ||| | | ||| || ||||| ||| Sbjct 34010 TATCGCACCGTGTGGGAAATTCCGCAAAAGACGCTGCTGAAGATGGCGGCCGATCGCGGT 33951 Query 55799 GCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCTTCACTGGCCAAG 55858 | | ||||| ||| ||||| ||||| | | ||||| | |||| ||||| Sbjct 33950 CCATTTATCGATCAGAGTCAGTCGATGAACGTGTACATGGCGGATCCGAGCGAAGCCAAA 33891 Query 55859 TTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGTATGTACTATCTG 55918 ||| |||||||||||||| |||||| |||||||||||||| |||||||| || Sbjct 33890 CTGACGAGCATGCACTTTTACGGTTGGAAGTTAGGACTCAAGACGGGCATGTACTACCTC 33831 Query 55919 CGGA 55922 |||| Sbjct 33830 CGGA 33827 >seq1004 Length=176236 Score = 93.3 bits (102), Expect = 5e-14 Identities = 131/184 (71%), Gaps = 0/184 (0%) Strand=Plus/Plus Query 55739 TACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGACATGAGTGCTGATCGTGGT 55798 || || || |||||||| ||||| || |||| || | | ||| || ||||| ||| Sbjct 31896 TATCGCACCGTGTGGGAAATTCCGCAAAAGACGCTACTGAAGATGGCGGCCGATCGCGGT 31955 Query 55799 GCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCTTCACTGGCCAAG 55858 | | ||||| ||| ||||| ||||||| | ||||| |||| ||||| Sbjct 31956 CCATTTATCGATCAGAGTCAGTCGATGAACATGTACATGGCAGATCCGAGCGAAGCCAAA 32015 Query 55859 TTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGTATGTACTATCTG 55918 ||| |||||||||||||| |||||| ||||||||||||||| |||||||| || Sbjct 32016 CTGACGAGCATGCACTTTTACGGTTGGAAGTTGGGACTCAAGACGGGCATGTACTACCTC 32075 Query 55919 CGGA 55922 |||| Sbjct 32076 CGGA 32079 >seq7405 Length=74570 Score = 86.0 bits (94), Expect = 7e-12 Identities = 124/175 (71%), Gaps = 0/175 (0%) Strand=Plus/Minus Query 55748 GTGTGGGAGATTCCACAGAAGAGTCTGATTGACATGAGTGCTGATCGTGGTGCGTACATC 55807 ||||| || ||||| || || | || | | ||| || ||||| || || | ||| Sbjct 57715 GTGTGAGAAATTCCGCAAAAAACGCTACTGAAGATGGCAGCCGATCGCGGCGCTTTTATC 57656 Query 55808 GACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCTTCACTGGCCAAGTTGAGCTCG 55867 || ||| ||||| ||||| | | |||| | |||| | ||||| |||| Sbjct 57655 GATCAGAGTCAGTCGATGAACGTGTAAATGGCGGATCCGAGAGAAGCCAAATTGACGAAC 57596 Query 55868 ATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGTATGTACTATCTGCGGA 55922 |||||||||||||| |||||| ||||||||||||||| |||||||| || |||| Sbjct 57595 ATGCACTTTTACGGTTGGAAGTTGGGACTCAAGACGGGCATGTACTACCTCCGGA 57541 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 546233302667000