Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loxosceles_20reclusa_20[genbank_20GCA_5F001188405.1_202015-04-27] 143,665 sequences; 3,262,478,678 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq56889 120 2e-22 seq17656 111 1e-19 seq1004 111 1e-19 seq15631 100 2e-16 seq22141 98.7 6e-16 seq454 98.7 6e-16 seq8227 93.3 3e-14 seq9166 89.7 3e-13 >seq56889 Length=12386 Score = 120 bits (132), Expect = 2e-22 Identities = 166/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| || || || ||||| |||| ||| || || || || || ||||| |||||||| Sbjct 6059 GCCTCCCCTGAGTCGCAAGACCAGATGTAGGGTAGATTCTTTCTGGATGTTGTAATCTGA 6118 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 ||| || || | ||||| || ||||| || ||||| ||||||||||| ||||| || || Sbjct 6119 AAGCGTGCGGCCATCTTCCAGCTGTTTGCCAGCAAAAATTAAACGCTGCTGGTCTGGTGG 6178 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACG-ATAAAATTGTGTCTTCGCTCTCCA 34657 | || || |||||| ||| ||||| || ||| | ||| ||||| | |||| Sbjct 6179 GATACCTTCTTTGTCTTGGAT-TTTTGCCTTTACGTTTTCAATGGTGTCACTGGGTTCCA 6237 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 |||| | || || || || || || | || |||||||| ||||||||| Sbjct 6238 CTTCAAGTGTGATGGTCTTGCCCGTGAGGGTCTTCACAAAGATCTGCATG 6287 Score = 111 bits (122), Expect = 1e-19 Identities = 164/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 |||||||||||| | |||||| | ||| || || || |||||||||||||| || || Sbjct 5831 GCCGCCTCTAAGCCTCAACACAAGATGCAGGGTAGATTCTTTTTGAATGTTATAGTCCGA 5890 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 ||| || || | ||||| | || || || ||||| || | |||||| ||||| || || Sbjct 5891 AAGGGTACGACCATCTTCTAACTGCTTTCCAGCAAAAATCAGACGCTGCTGGTCTGGTGG 5950 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTC-TTCGCTCTCCA 34657 | || || |||||| ||||||| || | | || ||||| | | | || | Sbjct 5951 GATACCTTCTTTGTCTTGGATCTTTGCCTTGACATTTTCGATAGTGTCACTTGGT-TCAA 6009 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 |||| | || || ||||| || || || || || ||||||||||||||| Sbjct 6010 CTTCAAGAGTGATTGTTTTCCCAGTCAATGTCTTAACAAAAATCTGCATG 6059 Score = 109 bits (120), Expect = 3e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||| | |||| ||| | ||| | ||| ||| || || || || || || || Sbjct 5604 CCTCCTCTCAACCGCAGCACAAGATGCAATGTGGACTCTTTCTGGATATTGTAGTCGGAC 5663 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || ||||| | ||||||||||| ||||| ||||| || | ||| || ||||| || || Sbjct 5664 AGGGTTCGGCCATCTTCAAGTTGCTTACCAGCAAAAATAAGACGTTGCTGGTCTGGGGGA 5723 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAAC-GATAAAATTGTGTCTTCGCTCTCCAC 34658 | ||||| ||||| ||| ||||| || || | |||||| || | ||||| Sbjct 5724 ATGCCCTCTTTGTC-CTGAATTTTTGCCTTGACATTTTCAATTGTATCACTGGGTTCCAC 5782 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 ||| | ||||| || || || ||||| || || ||||||||||||||| Sbjct 5783 TTCAAGTGTTATGGTCTTCCCTGTTAAAGTCTTGACAAAAATCTGCATG 5831 Score = 109 bits (120), Expect = 3e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| || || || ||||| |||| ||| || || || || || ||||| |||||||| Sbjct 6515 GCCTCCCCTGAGTCGCAAGACCAGATGTAGGGTAGATTCTTTCTGGATGTTGTAATCTGA 6574 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 ||| || || | ||||| || ||||| || || || ||||||||||| ||||| || || Sbjct 6575 AAGAGTGCGGCCATCTTCCAGCTGTTTGCCAGCGAAAATTAAACGCTGCTGGTCTGGTGG 6634 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACG-ATAAAATTGTGTCTTCGCTCTCCA 34657 | || || |||||| ||| ||||| || ||| | ||| ||||| | ||| | Sbjct 6635 GATACCTTCTTTGTCTTGGAT-TTTTGCCTTCACGTTTTCAATGGTGTCACTGGGCTCTA 6693 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 |||| | || || || || || || | || || ||||| |||||||| Sbjct 6694 CTTCAAGTGTGATGGTCTTGCCCGTGAGGGTCTTTACAAAGATCTGCAT 6742 Score = 102 bits (112), Expect = 5e-17 Identities = 162/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| |||||||| | |||||| | || | || || |||||||||||||| ||||| Sbjct 6287 GCCTCCTCTAAGCCTCAACACAAGGTGCAAGGTAGATTCTTTTTGAATGTTATAGTCTGA 6346 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 ||| || || | ||||| | || ||||| ||||| || | ||| || ||||| || || Sbjct 6347 AAGAGTACGACCATCTTCTAACTGCTTACCAGCAAAAATAAGACGTTGCTGGTCGGGTGG 6406 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTC-TTCGCTCTCCA 34657 | || ||||||||| ||||||| || | | || ||||| | | | || | Sbjct 6407 AATGCCTTCCTTGTCTTGGATCTTTGCCTTGACATTTTCGATAGTGTCACTTGGT-TCAA 6465 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 |||| | || || ||||| || || || || || || |||||||||||| Sbjct 6466 CTTCAAGAGTGATTGTTTTCCCAGTCAATGTCTTGACGAAAATCTGCATG 6515 >seq17656 Length=61091 Score = 111 bits (122), Expect = 1e-19 Identities = 163/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATC--TG 34537 ||||||| ||| |||| || | |||||| |||||||| || ||||| || || || | Sbjct 9316 CCGCCTCGAAGCCGCAGGACGAGATGGAGGGTGCTCTCTTTCTGAATATTGTAGTCGCTC 9257 Query 34538 AAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCG 34597 || | | || ||||| || ||||| || || ||||| || || |||||||| || |||| Sbjct 9256 AACGAG--CGATCGTCCTCCAGTTGCTTTCCCGCAAAAATCAACCGCTGTTGATCTGGCG 9199 Query 34598 GCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCA 34657 | | || || || ||| || || | ||||| || || |||||| ||| Sbjct 9198 GTATACCTTCTTTATCTTGAATTTTCTCTTTTACAGACTTTATAGTGTCTGTTAGCTCAG 9139 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 |||| | || |||||||| || || || ||||||||||||| ||||| Sbjct 9138 CTTCGATCGTGATCGTTTTGCCTGTCAATGTTTTCACAAAAAATTGCAT 9090 >seq1004 Length=176236 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 ||||||| ||| |||| || | |||||| |||||||| || ||||| || || || Sbjct 108944 CCGCCTCGAAGCCGCAGGACGAGATGGAGGGTGCTCTCTTTCTGAATATTGTAGTCGCTC 108885 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || | || ||||| || ||||| || || ||||| || || |||||||| || ||||| Sbjct 108884 AGCGAGCGATCGTCCTCCAGTTGCTTTCCCGCAAAAATCAACCGCTGTTGATCTGGCGGT 108825 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCA-C 34658 | || || || ||| || || | ||||| || || |||||| || | || | Sbjct 108824 ATACCTTCTTTATCTTGAATTTTCTCTTTTACAGACTTTATAGTGTCTGT-CTGTTCAGC 108766 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||| | || |||||||| || || || ||||||||||||| ||||| Sbjct 108765 TTCGATCGTGATCGTTTTGCCTGTCAATGTTTTCACAAAAAATTGCAT 108718 >seq15631 Length=58196 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || |||| ||| | ||| ||||||||||| ||||| || || ||||| || ||||| Sbjct 20000 CCACCTCGAAGTCTCAAAACCAAATGGAGTGTGCTTTCTTTCTGAATATTGTAATCACTC 19941 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 | | || || || || ||||| || || |||||||| || |||||||| || || || Sbjct 19940 AAGGAACGATCATCCTCCAGTTGCTTCCCCGCAAATATCAACCGCTGTTGCTCTGGAGGT 19881 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCACT 34659 | ||||| || || ||||| | ||| | | | || || ||| ||| | Sbjct 19880 ATCCCCTCTTTATCCTGAATCTTCTCTTTCACAGTCATTATGGTTTCTGTAGGCTCAGCG 19821 Query 34660 TCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTT 34709 || | || |||||||| || || | |||||||||||||| ||||| || Sbjct 19820 TCAATCGTGATCGTTTTGCCTGTCAGCGTTTTCACAAAAAATTGCATCTT 19771 >seq22141 Length=76464 Score = 98.7 bits (108), Expect = 6e-16 Identities = 156/222 (70%), Gaps = 4/222 (2%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATC--TG 34537 ||||||| ||| |||| || | |||||| |||||||| || ||||| || || || | Sbjct 26757 CCGCCTCGAAGCCGCAGTACGAGATGGAGTGTGCTCTCTTTCTGAATATTGTAGTCGCTC 26698 Query 34538 AAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCG 34597 |||| || ||||| || ||||| || || ||||| ||||| |||||||| || | || Sbjct 26697 AAAGAA--CGATCGTCCTCCAGTTGCTTCCCCGCAAAGATTAACCGCTGTTGATCTGACG 26640 Query 34598 GCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCA 34657 | | || || || || || || | ||| | ||| || |||||| ||| Sbjct 26639 GTATACCTTCTTTATCCTGAATTTTCTCTTTCACAGATTTTATAGTGTCTGTCAGCTCAG 26580 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAA 34699 | || | || |||||||| | || |||||||||||||||| Sbjct 26579 CGTCGATCGTGATCGTTTTGTCTGTCAACGTTTTCACAAAAA 26538 >seq454 Length=212681 Score = 98.7 bits (108), Expect = 6e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 ||||||| ||| |||| || | ||||||||||||||| || ||| | || ||||| Sbjct 116485 CCGCCTCGAAGTCGCAGGACGAGATGGAGAGTGCTCTCTTTCTGAGTATTGTAATCGCTC 116544 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 | | || ||||| || ||||| || || ||||| || || |||||||| || ||||| Sbjct 116545 AACGAACGATCGTCCTCCAGTTGCTTTCCCGCAAAAATCAACCGCTGTTGATCTGGCGGT 116604 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCACT 34659 | | || || || || || | ||||| || || |||||| ||| | Sbjct 116605 ATATCTTCTTTATCCTGAATTTTCTCTTTTACAGACTTTATAGTGTCTGTCTGCTCAGCG 116664 Query 34660 TCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || | || |||||||| || || || ||||||||||||| ||||| Sbjct 116665 TCAATCGTGATCGTTTTGCCTGTCAATGTTTTCACAAAAAATTGCAT 116711 >seq8227 Length=99420 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATC--TG 34537 ||||||| || | || || |||||||| || ||||| || ||||| || ||||| | Sbjct 17183 CCGCCTCGAATTCTCAGTACTAAATGGAGTGTACTCTCTTTCTGAATATTGTAATCGTTC 17124 Query 34538 AAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCG 34597 |||| | | ||| | || ||||| || | ||||| ||||| || ||||| || || | Sbjct 17123 AAAGATT--GATCGCCCTCCAGTTGCTTCTCCGCAAAGATTAACCGTTGTTGATCTGGAG 17066 Query 34598 GCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCA 34657 | | || || |||||| || || | ||| | || || ||||| || ||| Sbjct 17065 GTATACCTTCTTTGTCTTGAATTTTCTCTTTCACGGACTTTATGATGTCTGCGGGCTCAG 17006 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 | || | || |||||||| || || || ||||||||||||| ||||| Sbjct 17005 CGTCGATCGTGATCGTTTTGCCTGTCAATGTTTTCACAAAAAATTGCAT 16957 >seq9166 Length=72308 Score = 89.7 bits (98), Expect = 3e-13 Identities = 155/220 (70%), Gaps = 4/220 (2%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||| || | || || | || | |||| | || |||||||| |||||||| Sbjct 29273 CCACCTCTCAGTCTCAGAACAAGGTGTAAAGTGTTTTCTTTTTGAATATTATAATCATTC 29332 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 | | | || | ||||| | ||||| |||||||| || | |||||||| || || || Sbjct 29333 AATATCCGATTATCTTCCAACTGTTTGCCGGCAAAAATAAGTCGCTGTTGTTCAGGTGGA 29392 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCT-TCGCTCTCCA 34657 | ||| || || ||| ||| || | ||||||| || ||| |||||| ||| ||| | Sbjct 29393 ATTCCTTCTTTATCT-TGAATTTGTTTTTTAACAATTTCAATGGTGTCTGTCGG-CTCAA 29450 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAA 34697 | || | || || ||||| || |||| ||||||||||| Sbjct 29451 CATCGATAGTAATTGTTTTCCCACTTAAAGTTTTCACAAA 29490 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314178534533945