Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loxosceles_20reclusa_20[genbank_20GCA_5F001188405.1_202015-04-27] 143,665 sequences; 3,262,478,678 total letters Query= NC_028699.1 Length=40740 Score E Sequences producing significant alignments: (Bits) Value seq140194 190 5e-44 >seq140194 Length=4052 Score = 190 bits (210), Expect = 5e-44 Identities = 308/444 (69%), Gaps = 27/444 (6%) Strand=Plus/Plus Query 26924 TTCGACAATGCGTTCGGCCTCATCCTTGTCGTAGATGCCTGCGAAACCGAAGGCAAGACG 26983 ||| || ||||| || ||||| |||| ||| ||||| || || | |||||||| | || Sbjct 2332 TTCTACGATGCGCTCTGCCTCGTCCTGGTCATAGATACCGCCGTACCCGAAGGCCAAGCG 2391 Query 26984 GGCGCACTGGATCATTGCTTTGTGTCGCAACATCCGTTTGGGATGTGACTGCCACGGTCC 27043 || ||||||||||| |||||||| |||| ||| || || || || ||||| || || Sbjct 2392 TGCACACTGGATCATGGCTTTGTGGCGCAGCATGCGGCGCGGGTGCGATTGCCAGGGGCC 2451 Query 27044 AGTAATCTCACGACCATCACGGGTTTTGAATGGTTCCCGGCGACATTCATCCATCCATTC 27103 || | |||| || ||| | | |||| |||||| || Sbjct 2452 --------CATG-CCATTGCGC---TTGCA-----CTCGGC----------CATCCACTC 2484 Query 27104 GGTAACGCAGATCGGATGGTTACGGTCCTTACGGTAAATCCTGCATGTACATGATTCGTT 27163 || || ||| || |||| ||||| || ||||| || |||| || || ||||| Sbjct 2485 CGTCACTTTGATAGGCCGGTTGCGGTCTTTGCGGTAGATGATGCAGGTGCAGCTTTCGTC 2544 Query 27164 ATCCTGCTCAAAATCCATACCGTCAAACTGCTGGTTTTCGTTGATGATACGGGACCAGCC 27223 | ||||||||| || |||||||| |||||| ||| | |||||||| || |||||| Sbjct 2545 GTTCTGCTCAAACTCGATACCGTCGAACTGCGGGTGTGAATTGATGATCCGACTCCAGCC 2604 Query 27224 ATCAACACCCACCACAGGGACGATCCCGTTCTGCTTATCAGGAAAGGCGTAAATTTCTTT 27283 || || ||||| || || ||||| ||||| | ||| || || |||||||| ||||| || Sbjct 2605 GTCCACGCCCACAACGGGCACGATGCCGTTGTTCTTGTCGGGGAAGGCGTAGATTTCCTT 2664 Query 27284 CGTCCACGGATTAAGACCGTACTGGTTGGCGACTATCAGTAGCGCAATAAACTGCGCATC 27343 ||||| || || || |||||||||||||||| | ||| || || | | |||||| || Sbjct 2665 GGTCCAGGGGTTCAGCGCGTACTGGTTGGCGACCACCAGCAGGGCGGTCATCTGCGCGTC 2724 Query 27344 ACTGGCGTCACCTTTAAAAGCTGT 27367 || | | ||||| || || || Sbjct 2725 GCTCACCTGGCCTTTGAAGGCCGT 2748 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130024196792460