Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loxosceles_20reclusa_20[genbank_20GCA_5F001188405.1_202015-04-27] 143,665 sequences; 3,262,478,678 total letters Query= NC_028853.1 Length=50078 Score E Sequences producing significant alignments: (Bits) Value seq6077 183 1e-41 seq73647 145 2e-30 seq843 125 2e-24 >seq6077 Length=190368 Score = 183 bits (202), Expect = 1e-41 Identities = 399/593 (67%), Gaps = 6/593 (1%) Strand=Plus/Plus Query 38861 ATTGTTTTATGGAACCGTTCGCAGATACCATTCGTCTGGGGATGCTTCACTTTCGTTTTC 38920 || ||| |||| | || ||| || || ||||| ||||| ||| || |||| || | Sbjct 48206 ATAGTTCTATGAAGCCTTTCACATATGCCATTAGTCTGTGGAGAATTGGCTTTGGTCCTA 48265 Query 38921 GTATGCTCTATGTCATTTATCGCTAAATAAAGCTCATAATCGTGATTTTCTACCTTGCCA 38980 | ||| || || | | || | |||||||||| |||| |||||||||| ||| ||| Sbjct 48266 GAATGATCGATATTTTCGATTCCCAAATAAAGCTGATAAGCGTGATTTTCAGGCTTACCA 48325 Query 38981 CAATATTCACTTCCTCGGTCAGTTAATATGCGTAACATCGGTAAACCTTGGCTTTCAAAG 39040 ||||| || |||||||||| || | | || || | || | | ||| ||||| Sbjct 48326 CAATACTCTGTTCCTCGGTCTGTAAGGACACGCAATAATGGCACATTTTGCTCATCAAAA 48385 Query 39041 TATGGTAACACTTTATCATTCAGCATATCCGCAGCACTGATAGCGGTCTTCATTGTATAA 39100 |||||| |||| |||||||||||| || |||||| | ||||| || || ||||||| Sbjct 48386 AATGGTATCACTCTATCATTCAGCAAGTCAGCAGCAGTAATAGCCGTTTTGTCTGTATAA 48445 Query 39101 AGTTTTGCAAACGCCACTTTACTGTAAGTATCAATAAACGTTTGTTGATAAATACGACCC 39160 || || ||||| || ||| | ||||||||||| || ||||| || || || | || Sbjct 48446 AGCTTGGCAAATGCTACTCGAGAATAAGTATCAATGAAGGTTTGCTGGTAGATTCTTCCT 48505 Query 39161 ACTCCTTTGAGGTTGCCCACATAGAAAGTATCTTGTGAGCCAAGATAGCCAGGGTGTACC 39220 | ||||| | || || ||||| | |||||||| || || | ||| || | ||| | Sbjct 48506 ATACCTTTTATATTACCTACATAATAGGTATCTTGAGAACCCAAATAACCTGAATGTTCG 48565 Query 39221 GTTTCAATTTCACCACAGGCAATCTC-ATCTTCTTT--CTTACGCTCTAAGGCTTGTACC 39277 || |||||||||||| || |||| | |||||| ||| ||||| ||| | Sbjct 48566 GTGTCAATTTCACCATGTGC-TTCTCTTTGTTCTTTAACTT--TTTCTAAAGCTGCAAGT 48622 Query 39278 TGTGTTTCACTGAGTATAATACCTTGTTCTGCAACCAGTTTTTCCAGGGCGATTAATCTT 39337 || ||| | | |||||| || | || || || | ||||||| || | | |||| Sbjct 48623 TGCTCTTCGGTTAATATAATTCCATCTTGAGCTACTTTTGTTTCCAGTGCTTTAAGTCTT 48682 Query 39338 TGCTTAAAATTGGCAAGATGATGACGTAACCAAATCGAACGTACACCTCCTGCTGAAACA 39397 | ||| ||| | |||||| || | | ||| || || | || || || |||| Sbjct 48683 TTCTTGAAAGTTTCAAGATCATTTCTCAGCCATATAGATCTCACTCCCCCCTGAGAAATT 48742 Query 39398 AAGATGCCTTGTTTACGGAGTTCCTTACTCACTCTTACCTGTCCAAATGCCGG 39450 | |||||| ||| | ||||| || ||||| | || ||| |||| || Sbjct 48743 ATTATGCCTCTTTTTCTCAGTTCATTTGCAGCTCTTTCTTGCCCATATGCTGG 48795 >seq73647 Length=12004 Score = 145 bits (160), Expect = 2e-30 Identities = 208/293 (71%), Gaps = 0/293 (0%) Strand=Plus/Plus Query 38861 ATTGTTTTATGGAACCGTTCGCAGATACCATTCGTCTGGGGATGCTTCACTTTCGTTTTC 38920 || ||| |||| | || ||| || || ||||| ||||| ||| || |||| || | Sbjct 3150 ATAGTTCTATGAAGCCTTTCACATATGCCATTAGTCTGTGGAGAATTGGCTTTGGTCCTA 3209 Query 38921 GTATGCTCTATGTCATTTATCGCTAAATAAAGCTCATAATCGTGATTTTCTACCTTGCCA 38980 | ||| || || | | || | |||||||||| |||| |||||||||| ||| ||| Sbjct 3210 GAATGATCGATATTTTCGATTCCCAAATAAAGCTGATAAGCGTGATTTTCAGGCTTACCA 3269 Query 38981 CAATATTCACTTCCTCGGTCAGTTAATATGCGTAACATCGGTAAACCTTGGCTTTCAAAG 39040 ||||| || |||||||||| || | | || || | || | | ||| ||||| Sbjct 3270 CAATACTCTGTTCCTCGGTCTGTAAGGACACGCAATAATGGCACATTTTGCTCATCAAAA 3329 Query 39041 TATGGTAACACTTTATCATTCAGCATATCCGCAGCACTGATAGCGGTCTTCATTGTATAA 39100 |||||| |||| |||||||||||| || |||||| | ||||| || || ||||||| Sbjct 3330 AATGGTATCACTCTATCATTCAGCAAGTCAGCAGCAGTAATAGCCGTTTTGTCTGTATAA 3389 Query 39101 AGTTTTGCAAACGCCACTTTACTGTAAGTATCAATAAACGTTTGTTGATAAAT 39153 || || ||||| || ||| | ||||||||||| || ||||| || || || Sbjct 3390 AGCTTGGCAAATGCTACTCGAGAATAAGTATCAATGAAGGTTTGCTGGTAGAT 3442 >seq843 Length=319524 Score = 125 bits (138), Expect = 2e-24 Identities = 204/292 (70%), Gaps = 9/292 (3%) Strand=Plus/Plus Query 38945 AAATAAAGCTCATAATCGTGATTTTCTACCTTGCCACAATATTCACTTCCTCGGTCAGTT 39004 ||||| |||| |||| ||||||||||| ||||||||||||||| | || | |||||| Sbjct 29571 AAATATAGCTGATAAGCGTGATTTTCTGGCTTGCCACAATATTCCGTACCCCTATCAGTT 29630 Query 39005 AATATGCGTAACATCGGTAAACCTTGGCT-TTCAAAGTATGGTAACACTTTATCATTCAG 39063 | |||||||| | || || | ||| ||||| |||| | ||| ||||||| || Sbjct 29631 AGAATGCGTAATAATGG-AATTTTCTGCTCATCAAAAAATGGAATAACTCTATCATTGAG 29689 Query 39064 CATATCCGCAGCACTGATAGCGGTCTTCATTGTATAAAGTTTTGCAAACGCCACTTTACT 39123 | ||| ||||| | ||||| || | || |||||||| | | || || | Sbjct 29690 AAGATCTGCAGCTGTAATAGCTGTTCTGTCCGTGTAAAGTTTAACCATTGCAACCCTGGA 29749 Query 39124 GTAAGTATCAATAAACGTTTGTTGATAAATACGACCCACTCCTTTGAGGTTGCCCACATA 39183 ||||| |||| ||| || || |||||||| || || | |||||| ||||||| Sbjct 29750 ATAAGTGTCAACAAAAGTCTGCTGATAAATTCGCCCTATACCTTTG-------CCACATA 29802 Query 39184 GAAAGTATCTTGTGAGCCAAGATAGCCAGGGTGTACCGTTTCAATTTCACCA 39235 | |||||||| || || | ||| || || ||| || |||||||||||| Sbjct 29803 ATAGGTATCTTGAGAACCCAAATAACCTGGATGTTGCGCCTCAATTTCACCA 29854 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 159854818129200