Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Loxosceles_20reclusa_20[genbank_20GCA_5F001188405.1_202015-04-27]
143,665 sequences; 3,262,478,678 total letters
Query= NC_028853.1
Length=50078
Score E
Sequences producing significant alignments: (Bits) Value
seq6077 183 1e-41
seq73647 145 2e-30
seq843 125 2e-24
>seq6077
Length=190368
Score = 183 bits (202), Expect = 1e-41
Identities = 399/593 (67%), Gaps = 6/593 (1%)
Strand=Plus/Plus
Query 38861 ATTGTTTTATGGAACCGTTCGCAGATACCATTCGTCTGGGGATGCTTCACTTTCGTTTTC 38920
|| ||| |||| | || ||| || || ||||| ||||| ||| || |||| || |
Sbjct 48206 ATAGTTCTATGAAGCCTTTCACATATGCCATTAGTCTGTGGAGAATTGGCTTTGGTCCTA 48265
Query 38921 GTATGCTCTATGTCATTTATCGCTAAATAAAGCTCATAATCGTGATTTTCTACCTTGCCA 38980
| ||| || || | | || | |||||||||| |||| |||||||||| ||| |||
Sbjct 48266 GAATGATCGATATTTTCGATTCCCAAATAAAGCTGATAAGCGTGATTTTCAGGCTTACCA 48325
Query 38981 CAATATTCACTTCCTCGGTCAGTTAATATGCGTAACATCGGTAAACCTTGGCTTTCAAAG 39040
||||| || |||||||||| || | | || || | || | | ||| |||||
Sbjct 48326 CAATACTCTGTTCCTCGGTCTGTAAGGACACGCAATAATGGCACATTTTGCTCATCAAAA 48385
Query 39041 TATGGTAACACTTTATCATTCAGCATATCCGCAGCACTGATAGCGGTCTTCATTGTATAA 39100
|||||| |||| |||||||||||| || |||||| | ||||| || || |||||||
Sbjct 48386 AATGGTATCACTCTATCATTCAGCAAGTCAGCAGCAGTAATAGCCGTTTTGTCTGTATAA 48445
Query 39101 AGTTTTGCAAACGCCACTTTACTGTAAGTATCAATAAACGTTTGTTGATAAATACGACCC 39160
|| || ||||| || ||| | ||||||||||| || ||||| || || || | ||
Sbjct 48446 AGCTTGGCAAATGCTACTCGAGAATAAGTATCAATGAAGGTTTGCTGGTAGATTCTTCCT 48505
Query 39161 ACTCCTTTGAGGTTGCCCACATAGAAAGTATCTTGTGAGCCAAGATAGCCAGGGTGTACC 39220
| ||||| | || || ||||| | |||||||| || || | ||| || | ||| |
Sbjct 48506 ATACCTTTTATATTACCTACATAATAGGTATCTTGAGAACCCAAATAACCTGAATGTTCG 48565
Query 39221 GTTTCAATTTCACCACAGGCAATCTC-ATCTTCTTT--CTTACGCTCTAAGGCTTGTACC 39277
|| |||||||||||| || |||| | |||||| ||| ||||| ||| |
Sbjct 48566 GTGTCAATTTCACCATGTGC-TTCTCTTTGTTCTTTAACTT--TTTCTAAAGCTGCAAGT 48622
Query 39278 TGTGTTTCACTGAGTATAATACCTTGTTCTGCAACCAGTTTTTCCAGGGCGATTAATCTT 39337
|| ||| | | |||||| || | || || || | ||||||| || | | ||||
Sbjct 48623 TGCTCTTCGGTTAATATAATTCCATCTTGAGCTACTTTTGTTTCCAGTGCTTTAAGTCTT 48682
Query 39338 TGCTTAAAATTGGCAAGATGATGACGTAACCAAATCGAACGTACACCTCCTGCTGAAACA 39397
| ||| ||| | |||||| || | | ||| || || | || || || ||||
Sbjct 48683 TTCTTGAAAGTTTCAAGATCATTTCTCAGCCATATAGATCTCACTCCCCCCTGAGAAATT 48742
Query 39398 AAGATGCCTTGTTTACGGAGTTCCTTACTCACTCTTACCTGTCCAAATGCCGG 39450
| |||||| ||| | ||||| || ||||| | || ||| |||| ||
Sbjct 48743 ATTATGCCTCTTTTTCTCAGTTCATTTGCAGCTCTTTCTTGCCCATATGCTGG 48795
>seq73647
Length=12004
Score = 145 bits (160), Expect = 2e-30
Identities = 208/293 (71%), Gaps = 0/293 (0%)
Strand=Plus/Plus
Query 38861 ATTGTTTTATGGAACCGTTCGCAGATACCATTCGTCTGGGGATGCTTCACTTTCGTTTTC 38920
|| ||| |||| | || ||| || || ||||| ||||| ||| || |||| || |
Sbjct 3150 ATAGTTCTATGAAGCCTTTCACATATGCCATTAGTCTGTGGAGAATTGGCTTTGGTCCTA 3209
Query 38921 GTATGCTCTATGTCATTTATCGCTAAATAAAGCTCATAATCGTGATTTTCTACCTTGCCA 38980
| ||| || || | | || | |||||||||| |||| |||||||||| ||| |||
Sbjct 3210 GAATGATCGATATTTTCGATTCCCAAATAAAGCTGATAAGCGTGATTTTCAGGCTTACCA 3269
Query 38981 CAATATTCACTTCCTCGGTCAGTTAATATGCGTAACATCGGTAAACCTTGGCTTTCAAAG 39040
||||| || |||||||||| || | | || || | || | | ||| |||||
Sbjct 3270 CAATACTCTGTTCCTCGGTCTGTAAGGACACGCAATAATGGCACATTTTGCTCATCAAAA 3329
Query 39041 TATGGTAACACTTTATCATTCAGCATATCCGCAGCACTGATAGCGGTCTTCATTGTATAA 39100
|||||| |||| |||||||||||| || |||||| | ||||| || || |||||||
Sbjct 3330 AATGGTATCACTCTATCATTCAGCAAGTCAGCAGCAGTAATAGCCGTTTTGTCTGTATAA 3389
Query 39101 AGTTTTGCAAACGCCACTTTACTGTAAGTATCAATAAACGTTTGTTGATAAAT 39153
|| || ||||| || ||| | ||||||||||| || ||||| || || ||
Sbjct 3390 AGCTTGGCAAATGCTACTCGAGAATAAGTATCAATGAAGGTTTGCTGGTAGAT 3442
>seq843
Length=319524
Score = 125 bits (138), Expect = 2e-24
Identities = 204/292 (70%), Gaps = 9/292 (3%)
Strand=Plus/Plus
Query 38945 AAATAAAGCTCATAATCGTGATTTTCTACCTTGCCACAATATTCACTTCCTCGGTCAGTT 39004
||||| |||| |||| ||||||||||| ||||||||||||||| | || | ||||||
Sbjct 29571 AAATATAGCTGATAAGCGTGATTTTCTGGCTTGCCACAATATTCCGTACCCCTATCAGTT 29630
Query 39005 AATATGCGTAACATCGGTAAACCTTGGCT-TTCAAAGTATGGTAACACTTTATCATTCAG 39063
| |||||||| | || || | ||| ||||| |||| | ||| ||||||| ||
Sbjct 29631 AGAATGCGTAATAATGG-AATTTTCTGCTCATCAAAAAATGGAATAACTCTATCATTGAG 29689
Query 39064 CATATCCGCAGCACTGATAGCGGTCTTCATTGTATAAAGTTTTGCAAACGCCACTTTACT 39123
| ||| ||||| | ||||| || | || |||||||| | | || || |
Sbjct 29690 AAGATCTGCAGCTGTAATAGCTGTTCTGTCCGTGTAAAGTTTAACCATTGCAACCCTGGA 29749
Query 39124 GTAAGTATCAATAAACGTTTGTTGATAAATACGACCCACTCCTTTGAGGTTGCCCACATA 39183
||||| |||| ||| || || |||||||| || || | |||||| |||||||
Sbjct 29750 ATAAGTGTCAACAAAAGTCTGCTGATAAATTCGCCCTATACCTTTG-------CCACATA 29802
Query 39184 GAAAGTATCTTGTGAGCCAAGATAGCCAGGGTGTACCGTTTCAATTTCACCA 39235
| |||||||| || || | ||| || || ||| || ||||||||||||
Sbjct 29803 ATAGGTATCTTGAGAACCCAAATAACCTGGATGTTGCGCCTCAATTTCACCA 29854
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 159854818129200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |