Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loxosceles_20reclusa_20[genbank_20GCA_5F001188405.1_202015-04-27] 143,665 sequences; 3,262,478,678 total letters Query= NC_028898.1 Length=35764 Score E Sequences producing significant alignments: (Bits) Value seq6077 192 1e-44 seq73647 154 3e-33 seq843 127 5e-25 >seq6077 Length=190368 Score = 192 bits (212), Expect = 1e-44 Identities = 401/593 (68%), Gaps = 6/593 (1%) Strand=Plus/Plus Query 24657 ATTGTTTTATGGAACCGTTCGCAGATGCCGTTAGTCTGCGGATGTTTTACCTTGGTTTTA 24716 || ||| |||| | || ||| || ||||| |||||||| ||| || | ||||| || Sbjct 48206 ATAGTTCTATGAAGCCTTTCACATATGCCATTAGTCTGTGGAGAATTGGCTTTGGTCCTA 48265 Query 24717 CTGTGTTCAATATCATTTATTGCTAAATAAAGCTCATAATCGTGATTTTCTACCTTGCCA 24776 || || |||| | ||| | |||||||||| |||| |||||||||| ||| ||| Sbjct 48266 GAATGATCGATATTTTCGATTCCCAAATAAAGCTGATAAGCGTGATTTTCAGGCTTACCA 48325 Query 24777 CAATATTCACTTCCTCGGTCAGTTAATATGCGTAACATCGGTAAACCTTGGCTTTCAAAG 24836 ||||| || |||||||||| || | | || || | || | | ||| ||||| Sbjct 48326 CAATACTCTGTTCCTCGGTCTGTAAGGACACGCAATAATGGCACATTTTGCTCATCAAAA 48385 Query 24837 TATGGTAACACTTTATCATTCAGCATATCCGCAGCACTGATAGCGGTCTTCATTGTATAA 24896 |||||| |||| |||||||||||| || |||||| | ||||| || || ||||||| Sbjct 48386 AATGGTATCACTCTATCATTCAGCAAGTCAGCAGCAGTAATAGCCGTTTTGTCTGTATAA 48445 Query 24897 AGTTTTGCAAACGCCACTTTACTGTAAGTATCAATAAACGTTTGTTGATAAATACGACCC 24956 || || ||||| || ||| | ||||||||||| || ||||| || || || | || Sbjct 48446 AGCTTGGCAAATGCTACTCGAGAATAAGTATCAATGAAGGTTTGCTGGTAGATTCTTCCT 48505 Query 24957 ACTCCTTTGAGGTTGCCCACATAGAAAGTATCTTGTGAGCCAAGATAGCCAGGGTGTGCC 25016 | ||||| | || || ||||| | |||||||| || || | ||| || | ||| | Sbjct 48506 ATACCTTTTATATTACCTACATAATAGGTATCTTGAGAACCCAAATAACCTGAATGTTCG 48565 Query 25017 GTTTCAATTTCACCACAGGCAATCTC-ATCTTCTTT--CTTACGCTCTAAGGCTTGTACC 25073 || |||||||||||| || |||| | |||||| ||| ||||| ||| | Sbjct 48566 GTGTCAATTTCACCATGTGC-TTCTCTTTGTTCTTTAACTT--TTTCTAAAGCTGCAAGT 48622 Query 25074 TGTGTTTCACTGAGTATAATACCTTGTTCTGCAACCAGTTTTTCCAGGGCGATTAATCTT 25133 || ||| | | |||||| || | || || || | ||||||| || | | |||| Sbjct 48623 TGCTCTTCGGTTAATATAATTCCATCTTGAGCTACTTTTGTTTCCAGTGCTTTAAGTCTT 48682 Query 25134 TGCTTAAAATTGGCAAGATGATGACGTAACCAAATCGAACGTACACCTCCTGCTGAAACA 25193 | ||| ||| | |||||| || | | ||| || || | || || || |||| Sbjct 48683 TTCTTGAAAGTTTCAAGATCATTTCTCAGCCATATAGATCTCACTCCCCCCTGAGAAATT 48742 Query 25194 AAGATGCCTTGTTTACGGAGTTCGTTACTCACTCTTACCTGTCCAAATGCCGG 25246 | |||||| ||| | ||||| || ||||| | || ||| |||| || Sbjct 48743 ATTATGCCTCTTTTTCTCAGTTCATTTGCAGCTCTTTCTTGCCCATATGCTGG 48795 >seq73647 Length=12004 Score = 154 bits (170), Expect = 3e-33 Identities = 210/293 (72%), Gaps = 0/293 (0%) Strand=Plus/Plus Query 24657 ATTGTTTTATGGAACCGTTCGCAGATGCCGTTAGTCTGCGGATGTTTTACCTTGGTTTTA 24716 || ||| |||| | || ||| || ||||| |||||||| ||| || | ||||| || Sbjct 3150 ATAGTTCTATGAAGCCTTTCACATATGCCATTAGTCTGTGGAGAATTGGCTTTGGTCCTA 3209 Query 24717 CTGTGTTCAATATCATTTATTGCTAAATAAAGCTCATAATCGTGATTTTCTACCTTGCCA 24776 || || |||| | ||| | |||||||||| |||| |||||||||| ||| ||| Sbjct 3210 GAATGATCGATATTTTCGATTCCCAAATAAAGCTGATAAGCGTGATTTTCAGGCTTACCA 3269 Query 24777 CAATATTCACTTCCTCGGTCAGTTAATATGCGTAACATCGGTAAACCTTGGCTTTCAAAG 24836 ||||| || |||||||||| || | | || || | || | | ||| ||||| Sbjct 3270 CAATACTCTGTTCCTCGGTCTGTAAGGACACGCAATAATGGCACATTTTGCTCATCAAAA 3329 Query 24837 TATGGTAACACTTTATCATTCAGCATATCCGCAGCACTGATAGCGGTCTTCATTGTATAA 24896 |||||| |||| |||||||||||| || |||||| | ||||| || || ||||||| Sbjct 3330 AATGGTATCACTCTATCATTCAGCAAGTCAGCAGCAGTAATAGCCGTTTTGTCTGTATAA 3389 Query 24897 AGTTTTGCAAACGCCACTTTACTGTAAGTATCAATAAACGTTTGTTGATAAAT 24949 || || ||||| || ||| | ||||||||||| || ||||| || || || Sbjct 3390 AGCTTGGCAAATGCTACTCGAGAATAAGTATCAATGAAGGTTTGCTGGTAGAT 3442 >seq843 Length=319524 Score = 127 bits (140), Expect = 5e-25 Identities = 208/298 (70%), Gaps = 9/298 (3%) Strand=Plus/Plus Query 24735 ATTGCTAAATAAAGCTCATAATCGTGATTTTCTACCTTGCCACAATATTCACTTCCTCGG 24794 ||| | ||||| |||| |||| ||||||||||| ||||||||||||||| | || | Sbjct 29565 ATTCCCAAATATAGCTGATAAGCGTGATTTTCTGGCTTGCCACAATATTCCGTACCCCTA 29624 Query 24795 TCAGTTAATATGCGTAACATCGGTAAACCTTGGCT-TTCAAAGTATGGTAACACTTTATC 24853 ||||||| |||||||| | || || | ||| ||||| |||| | ||| |||| Sbjct 29625 TCAGTTAGAATGCGTAATAATGG-AATTTTCTGCTCATCAAAAAATGGAATAACTCTATC 29683 Query 24854 ATTCAGCATATCCGCAGCACTGATAGCGGTCTTCATTGTATAAAGTTTTGCAAACGCCAC 24913 ||| || | ||| ||||| | ||||| || | || |||||||| | | || || Sbjct 29684 ATTGAGAAGATCTGCAGCTGTAATAGCTGTTCTGTCCGTGTAAAGTTTAACCATTGCAAC 29743 Query 24914 TTTACTGTAAGTATCAATAAACGTTTGTTGATAAATACGACCCACTCCTTTGAGGTTGCC 24973 | ||||| |||| ||| || || |||||||| || || | |||||| | Sbjct 29744 CCTGGAATAAGTGTCAACAAAAGTCTGCTGATAAATTCGCCCTATACCTTTG-------C 29796 Query 24974 CACATAGAAAGTATCTTGTGAGCCAAGATAGCCAGGGTGTGCCGTTTCAATTTCACCA 25031 |||||| | |||||||| || || | ||| || || ||| || |||||||||||| Sbjct 29797 CACATAATAGGTATCTTGAGAACCCAAATAACCTGGATGTTGCGCCTCAATTTCACCA 29854 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 114128162119980