Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loxosceles_20reclusa_20[genbank_20GCA_5F001188405.1_202015-04-27] 143,665 sequences; 3,262,478,678 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq454 100 3e-16 >seq454 Length=212681 Score = 100 bits (110), Expect = 3e-16 Identities = 259/395 (66%), Gaps = 0/395 (0%) Strand=Plus/Plus Query 34403 GGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTATCGGGGGAGCGAAGCG 34462 || || || || ||||| |||||| |||| |||||||| ||||| | |||| Sbjct 92630 GGTCCAGTGTATGGGTTTCAGTGGCGACATTTTGGGGCTCAGTATTCTCATATGAAAGCA 92689 Query 34463 GACTATTCGGGACAGGGAGCGGACCAGCTGCAGTACGTGATCGACACCTTGAAGCGGAAC 34522 ||||| | || || |||| || ||| || | ||||| | || | ||| || Sbjct 92690 GACTACACAGGTCAAGGAGTTGATCAGTTGGCAAATGTGATTAAGGCCATCAAGGAAAAT 92749 Query 34523 CCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGGATCTCCCTCTGATGGCG 34582 ||| |||| |||| || | |||| | |||||| | ||| | || |||| Sbjct 92750 CCTAATGATCGAAGAATAATTTTGTGTTCTTGGAACGCACTTGATATACCCAAAATGGTT 92809 Query 34583 CTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAATGGGGAGCTGTCCTGCCAG 34642 |||||||| || ||| | ||| || || || ||||| || || || || || Sbjct 92810 CTCCCCCCTTGTCACTGTTTAGCCCAGTTTTATGTGAGTAATGGCGAACTATCATGTCAA 92869 Query 34643 CTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAGTTACGCT 34702 | || ||| | || || || ||||| ||||| || || || ||||||||||| || || Sbjct 92870 TTGTACCAAAGGTCTGGCGATATGGGTTTAGGTGTACCATTTAACATTGCTAGCTATGCC 92929 Query 34703 CTGCTCACGTACATGATCGCTCATGTCGTGGGGTTGGTTCCTGGGGAGCTGGTGCATACG 34762 || | || |||||||||| |||||| | | ||||| || | || || || Sbjct 92930 CTTTTGACACACATGATCGCACATGTCACTGACCTCAAACCTGGAGATTTTGTCCACACA 92989 Query 34763 TTGGGGGATGCGCATATCTACCTGAACCACATCGA 34797 || |||||||| || || || | |||||||| || Sbjct 92990 TTAGGGGATGCTCACATATATTTAAACCACATTGA 93024 Score = 100 bits (110), Expect = 3e-16 Identities = 259/395 (66%), Gaps = 0/395 (0%) Strand=Plus/Minus Query 6548 TCGATGTGGTTCAGGTAGATATGCGCATCCCCCAACGTATGCACCAGCTCCCCAGGAACC 6607 || |||||||| | || || || |||||||| || || || || | || ||||| Sbjct 93024 TCAATGTGGTTTAAATATATGTGAGCATCCCCTAATGTGTGGACAAAATCTCCAGGTTTG 92965 Query 6608 AACCCCACGACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGC 6667 | | |||||| |||||||||| || | || || || ||||||||||| || || Sbjct 92964 AGGTCAGTGACATGTGCGATCATGTGTGTCAAAAGGGCATAGCTAGCAATGTTAAATGGT 92905 Query 6668 ACCCCTAACCCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCG 6727 || ||||| ||||| || || || | ||| || | || || || || || ||||| Sbjct 92904 ACACCTAAACCCATATCGCCAGACCTTTGGTACAATTGACATGATAGTTCGCCATTACTC 92845 Query 6728 ACGTAGAATTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGG 6787 || || || ||| | ||| || |||||||| |||| || | ||| | | Sbjct 92844 ACATAAAACTGGGCTAAACAGTGACAAGGGGGGAGAACCATTTTGGGTATATCAAGTGCG 92785 Query 6788 TTCCACGCGCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCACG 6847 ||||| | |||| | || |||| |||| ||| || ||| | || | ||||| Sbjct 92784 TTCCAAGAACACAAAATTATTCTTCGATCATTAGGATTTTCCTTGATGGCCTTAATCACA 92725 Query 6848 TACTGCAGCTGGTCCGCTCCCTGTCCCGAATAGTCCGCTTCGCTCCCCCGATACTCCGCC 6907 | || ||| || |||| || || | ||||| |||| | ||||| ||| Sbjct 92724 TTTGCCAACTGATCAACTCCTTGACCTGTGTAGTCTGCTTTCATATGAGAATACTGAGCC 92665 Query 6908 CCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCC 6942 ||||| |||| |||||| ||||| || || || || Sbjct 92664 CCAAAATGTCGCCACTGAAACCCATACACTGGACC 92630 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447457404778800