Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Loxosceles_20reclusa_20[genbank_20GCA_5F001188405.1_202015-04-27]
143,665 sequences; 3,262,478,678 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq454 100 3e-16
>seq454
Length=212681
Score = 100 bits (110), Expect = 3e-16
Identities = 259/395 (66%), Gaps = 0/395 (0%)
Strand=Plus/Plus
Query 34403 GGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTATCGGGGGAGCGAAGCG 34462
|| || || || ||||| |||||| |||| |||||||| ||||| | ||||
Sbjct 92630 GGTCCAGTGTATGGGTTTCAGTGGCGACATTTTGGGGCTCAGTATTCTCATATGAAAGCA 92689
Query 34463 GACTATTCGGGACAGGGAGCGGACCAGCTGCAGTACGTGATCGACACCTTGAAGCGGAAC 34522
||||| | || || |||| || ||| || | ||||| | || | ||| ||
Sbjct 92690 GACTACACAGGTCAAGGAGTTGATCAGTTGGCAAATGTGATTAAGGCCATCAAGGAAAAT 92749
Query 34523 CCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGGATCTCCCTCTGATGGCG 34582
||| |||| |||| || | |||| | |||||| | ||| | || ||||
Sbjct 92750 CCTAATGATCGAAGAATAATTTTGTGTTCTTGGAACGCACTTGATATACCCAAAATGGTT 92809
Query 34583 CTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAATGGGGAGCTGTCCTGCCAG 34642
|||||||| || ||| | ||| || || || ||||| || || || || ||
Sbjct 92810 CTCCCCCCTTGTCACTGTTTAGCCCAGTTTTATGTGAGTAATGGCGAACTATCATGTCAA 92869
Query 34643 CTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAGTTACGCT 34702
| || ||| | || || || ||||| ||||| || || || ||||||||||| || ||
Sbjct 92870 TTGTACCAAAGGTCTGGCGATATGGGTTTAGGTGTACCATTTAACATTGCTAGCTATGCC 92929
Query 34703 CTGCTCACGTACATGATCGCTCATGTCGTGGGGTTGGTTCCTGGGGAGCTGGTGCATACG 34762
|| | || |||||||||| |||||| | | ||||| || | || || ||
Sbjct 92930 CTTTTGACACACATGATCGCACATGTCACTGACCTCAAACCTGGAGATTTTGTCCACACA 92989
Query 34763 TTGGGGGATGCGCATATCTACCTGAACCACATCGA 34797
|| |||||||| || || || | |||||||| ||
Sbjct 92990 TTAGGGGATGCTCACATATATTTAAACCACATTGA 93024
Score = 100 bits (110), Expect = 3e-16
Identities = 259/395 (66%), Gaps = 0/395 (0%)
Strand=Plus/Minus
Query 6548 TCGATGTGGTTCAGGTAGATATGCGCATCCCCCAACGTATGCACCAGCTCCCCAGGAACC 6607
|| |||||||| | || || || |||||||| || || || || | || |||||
Sbjct 93024 TCAATGTGGTTTAAATATATGTGAGCATCCCCTAATGTGTGGACAAAATCTCCAGGTTTG 92965
Query 6608 AACCCCACGACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGC 6667
| | |||||| |||||||||| || | || || || ||||||||||| || ||
Sbjct 92964 AGGTCAGTGACATGTGCGATCATGTGTGTCAAAAGGGCATAGCTAGCAATGTTAAATGGT 92905
Query 6668 ACCCCTAACCCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCG 6727
|| ||||| ||||| || || || | ||| || | || || || || || |||||
Sbjct 92904 ACACCTAAACCCATATCGCCAGACCTTTGGTACAATTGACATGATAGTTCGCCATTACTC 92845
Query 6728 ACGTAGAATTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGG 6787
|| || || ||| | ||| || |||||||| |||| || | ||| | |
Sbjct 92844 ACATAAAACTGGGCTAAACAGTGACAAGGGGGGAGAACCATTTTGGGTATATCAAGTGCG 92785
Query 6788 TTCCACGCGCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCACG 6847
||||| | |||| | || |||| |||| ||| || ||| | || | |||||
Sbjct 92784 TTCCAAGAACACAAAATTATTCTTCGATCATTAGGATTTTCCTTGATGGCCTTAATCACA 92725
Query 6848 TACTGCAGCTGGTCCGCTCCCTGTCCCGAATAGTCCGCTTCGCTCCCCCGATACTCCGCC 6907
| || ||| || |||| || || | ||||| |||| | ||||| |||
Sbjct 92724 TTTGCCAACTGATCAACTCCTTGACCTGTGTAGTCTGCTTTCATATGAGAATACTGAGCC 92665
Query 6908 CCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCC 6942
||||| |||| |||||| ||||| || || || ||
Sbjct 92664 CCAAAATGTCGCCACTGAAACCCATACACTGGACC 92630
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 447457404778800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |