Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Loxosceles_20reclusa_20[genbank_20GCA_5F001188405.1_202015-04-27]
143,665 sequences; 3,262,478,678 total letters
Query= NC_029304.1
Length=111246
Score E
Sequences producing significant alignments: (Bits) Value
seq17656 104 2e-17
seq1004 104 2e-17
seq454 104 2e-17
seq23149 96.9 2e-15
seq22141 87.8 1e-12
seq56889 86.0 4e-12
seq9166 84.2 2e-11
>seq17656
Length=61091
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849
|||||| ||||||||||||| | || || ||| || || || || | || ||
Sbjct 9090 ATGCAATTTTTTGTGAAAACATTGACAGGCAAAACGATCACGATCGAAGCTGAGCTAACA 9149
Query 27850 GACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGCAG 27909
||| | || | || || ||| | ||||| || ||||||||| | ||| || ||
Sbjct 9150 GACACTATAAAGTCTGTAAAAGAGAAAATTCAAGATAAAGAAGGTATACCGCCAGATCAA 9209
Query 27910 CAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACAAC 27969
|| ||||| |||||||| ||||| ||| |||| ||||| ||| ||| ||| |||||
Sbjct 9210 CAGCGGTTGATTTTTGCGGGAAAGCAACTGGAGGACGATCGCTCGTTGAGCGACTACAAT 9269
Query 27970 ATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016
|| || ||||||||||| | ||| | || |||| | || |||||
Sbjct 9270 ATTCAGAAAGAGAGCACCCTCCATCTCGTCCTGCGGCTTCGAGGCGG 9316
>seq1004
Length=176236
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849
|||||| ||||||||||||| | || || ||| || || || || | ||| ||
Sbjct 108718 ATGCAATTTTTTGTGAAAACATTGACAGGCAAAACGATCACGATCGAAGCTGAACAGACA 108777
Query 27850 GACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGCAG 27909
||| | || | || || ||| | ||||| || ||||||||| | ||| || ||
Sbjct 108778 GACACTATAAAGTCTGTAAAAGAGAAAATTCAAGATAAAGAAGGTATACCGCCAGATCAA 108837
Query 27910 CAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACAAC 27969
|| ||||| |||||||| ||||| ||| |||| ||||| ||| || ||| |||||
Sbjct 108838 CAGCGGTTGATTTTTGCGGGAAAGCAACTGGAGGACGATCGCTCGCTGAGCGACTACAAT 108897
Query 27970 ATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016
|| || ||||||||||| | ||| | || |||| | || |||||
Sbjct 108898 ATTCAGAAAGAGAGCACCCTCCATCTCGTCCTGCGGCTTCGAGGCGG 108944
>seq454
Length=212681
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849
|||||| ||||||||||||| | || || ||| || || ||||| | || ||
Sbjct 116711 ATGCAATTTTTTGTGAAAACATTGACAGGCAAAACGATCACGATTGACGCTGAGCAGACA 116652
Query 27850 GACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGCAG 27909
||| | || | || || ||| | ||||| || ||||||| | | ||| || ||
Sbjct 116651 GACACTATAAAGTCTGTAAAAGAGAAAATTCAGGATAAAGAAGATATACCGCCAGATCAA 116592
Query 27910 CAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACAAC 27969
|| ||||| |||||||| ||||| ||| |||| ||||| || ||| |||||||||
Sbjct 116591 CAGCGGTTGATTTTTGCGGGAAAGCAACTGGAGGACGATCGTTCGTTGAGCGATTACAAT 116532
Query 27970 ATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016
| || |||||||||||| | ||| | || |||| | || |||||
Sbjct 116531 ACTCAGAAAGAGAGCACTCTCCATCTCGTCCTGCGACTTCGAGGCGG 116485
>seq23149
Length=43904
Score = 96.9 bits (106), Expect = 2e-15
Identities = 150/213 (70%), Gaps = 6/213 (3%)
Strand=Plus/Minus
Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849
|||||| | |||||||||||| | | ||| ||| || || || ||||| || ||
Sbjct 20063 ATGCAATTATTTGTGAAAACTTTGAATGGAAAAACAATCACTATCGATGTTCAA----CC 20008
Query 27850 GACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGCAG 27909
|| || | | | || ||| || |||| ||||||||||| |||| || |||
Sbjct 20007 AACTATTGAAAGT--GTTAAAAAACAAATTCAAGACAAAGAAGGAATTCCACCCGATCAG 19950
Query 27910 CAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACAAC 27969
|||||| | |||||||| || ||||| ||||| || || | | || |||||| ||
Sbjct 19949 CAACGGCTTATTTTTGCTGGCAAACAGTTGGAGGATGATAGGATATTAAGCGATTATAAT 19890
Query 27970 ATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002
|| |||||||| | |||||| ||| | ||||||
Sbjct 19889 ATTCAAAAAGAAAACACTTTACATCTTGTTTTG 19857
>seq22141
Length=76464
Score = 87.8 bits (96), Expect = 1e-12
Identities = 157/228 (69%), Gaps = 1/228 (0%)
Strand=Plus/Plus
Query 27790 ATGCAAATTTT-TGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCAC 27848
|||||| |||| ||||||||| | || | ||| || || || || | || ||
Sbjct 26530 ATGCAATTTTTTTGTGAAAACGTTGACAGACAAAACGATCACGATCGACGCTGAGCTGAC 26589
Query 27849 CGACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGCA 27908
||| | || |||| || ||| | ||||| || ||||||||| | ||| || ||
Sbjct 26590 AGACACTATAAAATCTGTGAAAGAGAAAATTCAGGATAAAGAAGGTATACCGTCAGATCA 26649
Query 27909 GCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACAA 27968
|| |||||||| ||||| || || ||| |||| ||||| || ||| ||| |||||
Sbjct 26650 ACAGCGGTTAATCTTTGCGGGGAAGCAACTGGAGGACGATCGTTCTTTGAGCGACTACAA 26709
Query 27969 CATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016
|| || ||||||||||| | ||| | || |||| | || |||||
Sbjct 26710 TATTCAGAAAGAGAGCACACTCCATCTCGTACTGCGGCTTCGAGGCGG 26757
>seq56889
Length=12386
Score = 86.0 bits (94), Expect = 4e-12
Identities = 150/216 (69%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849
||||| || |||||||| || || || || || || ||| |||| || ||| ||
Sbjct 6286 ATGCAGATCTTTGTGAAGACCCTCACGGGCAAGACCATCACACTTGAAGTGGAACCCAGT 6227
Query 27850 GACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGCAG 27909
||| | || || || |||||| |||||||||||| | || || |||
Sbjct 6226 GACACCATTGAAAACGTAAAGGCAAAAATCCAAGACAAAGAAGGTATCCCACCAGACCAG 6167
Query 27910 CAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCA-GCTTGTCCGATTACAA 27968
|| || ||||||||||| || ||||| |||| || | |||| |||| || ||||||||
Sbjct 6166 CAGCGTTTAATTTTTGCTGGCAAACAGCTGGAAGATGGCCGCACGCTT-TCAGATTACAA 6108
Query 27969 CATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCG 28004
|||||| ||||| || | ||| |||| |||||
Sbjct 6107 CATCCAGAAAGAATCTACCCTACATCTGGTCTTGCG 6072
Score = 82.4 bits (90), Expect = 5e-11
Identities = 101/138 (73%), Gaps = 0/138 (0%)
Strand=Plus/Minus
Query 27865 GTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTT 27924
|| ||| ||||||| |||||||||||| |||| || |||||||| | ||||||
Sbjct 3118 GTGAAAGCAAAAATACAAGACAAAGAAGGTATTCCTCCAGACCAGCAACGTCTTATTTTT 3059
Query 27925 GCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGC 27984
|| || || || || || || | || | |||| || |||||||| || ||||| |
Sbjct 3058 GCAGGCAAGCAGTTAGAAGATGGCCGAACACTGTCAGACTACAACATACAGAAAGAATCC 2999
Query 27985 ACTTTGCATTTGGTTTTG 28002
|| ||||| |||||||||
Sbjct 2998 ACATTGCACTTGGTTTTG 2981
>seq9166
Length=72308
Score = 84.2 bits (92), Expect = 2e-11
Identities = 114/157 (73%), Gaps = 3/157 (2%)
Strand=Plus/Minus
Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849
|||||| | |||||||||||| | | ||||||| |||||||||||||| || ||
Sbjct 29668 ATGCAATTATTTGTGAAAACTTTAAGTGGGAAAACAATTACAATTGATGTTGACCCGACA 29609
Query 27850 G--ACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907
| || || | ||| | | ||| || |||| || |||||||| |||| || |
Sbjct 29608 GACACCAT-TGAAATTGTTAAAAAAACAAATTCAAGATAAAGAAGGAATTCCACCTGAAC 29550
Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGA 27944
|||| || | ||||||||||| ||||||||||| ||
Sbjct 29549 AGCAGCGACTTATTTTTGCCGGCAAACAATTGGAGGA 29513
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 355239314407455
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |