Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Loxosceles_20reclusa_20[genbank_20GCA_5F001188405.1_202015-04-27]
143,665 sequences; 3,262,478,678 total letters
Query= NC_029996.1
Length=134272
Score E
Sequences producing significant alignments: (Bits) Value
seq15631 104 2e-17
seq56889 98.7 9e-16
seq13072 84.2 2e-11
>seq15631
Length=58196
Score = 104 bits (114), Expect = 2e-17
Identities = 154/216 (71%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 39073 AACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGG-CAAGTGTTCGTTCGTC 39131
|| |||||||| || ||||| ||||| || ||||| ||||| |||| | || || ||
Sbjct 19985 AAAACCAAATGGAGTGTGCTTTCTTTCTGAATATTGTAATCACTCAAG-GAACGATCATC 19927
Query 39132 ATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTC 39191
|| || || || ||||||||||| | ||||| || || | || | | |||||| ||
Sbjct 19926 CTCCAGTTGCTTCCCCGCAAATATCAACCGCTGTTGCTCTGGAGGTATCCCCTCTTTATC 19867
Query 39192 CATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACT 39251
| || |||| ||| | ||| | || || | | ||| |||| | |||||| |
Sbjct 19866 CTGAATCTTCTCTTTCACAGTCATTATGGTTTCTGTAGGCTCAGCGTCAATCGTGATCGT 19807
Query 39252 TTTTCCCGTCAGCGTTTTAACAAAGATTTGCATCTT 39287
||| || ||||||||||| ||||| | |||||||||
Sbjct 19806 TTTGCCTGTCAGCGTTTTCACAAAAAATTGCATCTT 19771
>seq56889
Length=12386
Score = 98.7 bits (108), Expect = 9e-16
Identities = 172/247 (70%), Gaps = 4/247 (2%)
Strand=Plus/Plus
Query 39039 TAACTAAAATTTATTCAAGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTT 39098
|||| ||||| | || |||||| || | || || |||| |||||| || |||||
Sbjct 6043 TAACAAAAATCTG--CATGCCTCCCCTGAGTCGCAAGACCAGATGTAGGGTAGATTCTTT 6100
Query 39099 TTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAG 39158
|| || || ||||| | ||| || || | || || ||||||||||| ||||| || |
Sbjct 6101 CTGGATGTTGTAATCTGAAAGCGTGCGGCCATCTTCCAGCTGTTTGCCAGCAAAAATTAA 6160
Query 39159 ACGCTGCTGGTC-GGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCA 39217
|||||||||||| |||||| | | |||||||| |||||| || | | | |
Sbjct 6161 ACGCTGCTGGTCTGGTGGG-ATACCTTCTTTGTCTTGGATTTTTGCCTTTACGTTTTCAA 6219
Query 39218 CCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGA 39277
|| || || | ||||| || | ||||| | || ||||| || || || |||||||
Sbjct 6220 TGGTGTCACTGGGTTCCACTTCAAGTGTGATGGTCTTGCCCGTGAGGGTCTTCACAAAGA 6279
Query 39278 TTTGCAT 39284
| |||||
Sbjct 6280 TCTGCAT 6286
Score = 91.5 bits (100), Expect = 1e-13
Identities = 161/232 (69%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 39054 CAAGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATC 39113
|| |||||| || | || || |||| |||||| || ||||| || || || |||||
Sbjct 6512 CATGCCTCCCCTGAGTCGCAAGACCAGATGTAGGGTAGATTCTTTCTGGATGTTGTAATC 6571
Query 39114 GGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTC-GG 39172
| ||| || || | || || ||||||||||| || || || | |||||||||||| ||
Sbjct 6572 TGAAAGAGTGCGGCCATCTTCCAGCTGTTTGCCAGCGAAAATTAAACGCTGCTGGTCTGG 6631
Query 39173 TGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACT 39232
|||| | | |||||||| |||||| || | | | | || || || | ||
Sbjct 6632 TGGG-ATACCTTCTTTGTCTTGGATTTTTGCCTTCACGTTTTCAATGGTGTCACTGGGCT 6690
Query 39233 CCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284
| || || | ||||| | || ||||| || || || |||||||| |||||
Sbjct 6691 CTACTTCAAGTGTGATGGTCTTGCCCGTGAGGGTCTTTACAAAGATCTGCAT 6742
Score = 82.4 bits (90), Expect = 7e-11
Identities = 161/233 (69%), Gaps = 4/233 (2%)
Strand=Plus/Plus
Query 39054 CAAGCCTCCTCTTAAGCGT-AACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAAT 39112
|| ||| ||||| |||| | ||||| | ||| || || |||||||| || ||||| |
Sbjct 5828 CATGCCGCCTCT-AAGCCTCAACACAAGATGCAGGGTAGATTCTTTTTGAATGTTATAGT 5886
Query 39113 CGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTC-G 39171
| | ||| || || | || || | ||| || || ||||| || |||||||||||||| |
Sbjct 5887 CCGAAAGGGTACGACCATCTTCTAACTGCTTTCCAGCAAAAATCAGACGCTGCTGGTCTG 5946
Query 39172 GTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGAC 39231
||||| | | |||||||| ||| || |||| | | | || || || |
Sbjct 5947 GTGGG-ATACCTTCTTTGTCTTGGATCTTTGCCTTGACATTTTCGATAGTGTCACTTGGT 6005
Query 39232 TCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284
|| || || | ||||| |||| || |||| || |||||||| || |||||
Sbjct 6006 TCAACTTCAAGAGTGATTGTTTTCCCAGTCAATGTCTTAACAAAAATCTGCAT 6058
>seq13072
Length=78421
Score = 84.2 bits (92), Expect = 2e-11
Identities = 150/214 (70%), Gaps = 4/214 (2%)
Strand=Plus/Plus
Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGG-CAAGTGTTCGTTCGTCATC 39134
|| ||||| || ||||| ||||| || ||||| |||||| |||| | || || || ||
Sbjct 53555 ACAAAATGGAGTGTGCTTTCTTTCTGAATATTGTAATCGCTCAAG-GAACGATCATCCTC 53613
Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194
|| || || ||||||||||| | ||||| || || | || | | ||||| |||
Sbjct 53614 CAGTTGCTTCCCCGCAAATATCAACCGCTGTTGCTCTGGCGGTATCCCTTCTTTATCCTG 53673
Query 39195 GATTTTCTGTTTGAGCGTCGCCACCGT-ATCGCTCGACTCCACGTCCACCGTGATACTTT 39253
|| |||| ||| | ||| | || |||| | ||| |||| | |||||| ||||
Sbjct 53674 AATCTTCTCTTTCACAGTCATTATGGTGTTCGC-AGGCTCAGCGTCGATCGTGATCCTTT 53732
Query 39254 TTCCCGTCAGCGTTTTAACAAAGATTTGCATCTT 39287
| ||||||||||| ||||| | ||||||||
Sbjct 53733 TCATTGTCAGCGTTTTCACAAAAAAATGCATCTT 53766
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 428793501226145
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |