Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loxosceles_20reclusa_20[genbank_20GCA_5F001188405.1_202015-04-27] 143,665 sequences; 3,262,478,678 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq15631 104 2e-17 seq56889 98.7 9e-16 seq13072 84.2 2e-11 >seq15631 Length=58196 Score = 104 bits (114), Expect = 2e-17 Identities = 154/216 (71%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 39073 AACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGG-CAAGTGTTCGTTCGTC 39131 || |||||||| || ||||| ||||| || ||||| ||||| |||| | || || || Sbjct 19985 AAAACCAAATGGAGTGTGCTTTCTTTCTGAATATTGTAATCACTCAAG-GAACGATCATC 19927 Query 39132 ATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTC 39191 || || || || ||||||||||| | ||||| || || | || | | |||||| || Sbjct 19926 CTCCAGTTGCTTCCCCGCAAATATCAACCGCTGTTGCTCTGGAGGTATCCCCTCTTTATC 19867 Query 39192 CATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACT 39251 | || |||| ||| | ||| | || || | | ||| |||| | |||||| | Sbjct 19866 CTGAATCTTCTCTTTCACAGTCATTATGGTTTCTGTAGGCTCAGCGTCAATCGTGATCGT 19807 Query 39252 TTTTCCCGTCAGCGTTTTAACAAAGATTTGCATCTT 39287 ||| || ||||||||||| ||||| | ||||||||| Sbjct 19806 TTTGCCTGTCAGCGTTTTCACAAAAAATTGCATCTT 19771 >seq56889 Length=12386 Score = 98.7 bits (108), Expect = 9e-16 Identities = 172/247 (70%), Gaps = 4/247 (2%) Strand=Plus/Plus Query 39039 TAACTAAAATTTATTCAAGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTT 39098 |||| ||||| | || |||||| || | || || |||| |||||| || ||||| Sbjct 6043 TAACAAAAATCTG--CATGCCTCCCCTGAGTCGCAAGACCAGATGTAGGGTAGATTCTTT 6100 Query 39099 TTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAG 39158 || || || ||||| | ||| || || | || || ||||||||||| ||||| || | Sbjct 6101 CTGGATGTTGTAATCTGAAAGCGTGCGGCCATCTTCCAGCTGTTTGCCAGCAAAAATTAA 6160 Query 39159 ACGCTGCTGGTC-GGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCA 39217 |||||||||||| |||||| | | |||||||| |||||| || | | | | Sbjct 6161 ACGCTGCTGGTCTGGTGGG-ATACCTTCTTTGTCTTGGATTTTTGCCTTTACGTTTTCAA 6219 Query 39218 CCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGA 39277 || || || | ||||| || | ||||| | || ||||| || || || ||||||| Sbjct 6220 TGGTGTCACTGGGTTCCACTTCAAGTGTGATGGTCTTGCCCGTGAGGGTCTTCACAAAGA 6279 Query 39278 TTTGCAT 39284 | ||||| Sbjct 6280 TCTGCAT 6286 Score = 91.5 bits (100), Expect = 1e-13 Identities = 161/232 (69%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 39054 CAAGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATC 39113 || |||||| || | || || |||| |||||| || ||||| || || || ||||| Sbjct 6512 CATGCCTCCCCTGAGTCGCAAGACCAGATGTAGGGTAGATTCTTTCTGGATGTTGTAATC 6571 Query 39114 GGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTC-GG 39172 | ||| || || | || || ||||||||||| || || || | |||||||||||| || Sbjct 6572 TGAAAGAGTGCGGCCATCTTCCAGCTGTTTGCCAGCGAAAATTAAACGCTGCTGGTCTGG 6631 Query 39173 TGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACT 39232 |||| | | |||||||| |||||| || | | | | || || || | || Sbjct 6632 TGGG-ATACCTTCTTTGTCTTGGATTTTTGCCTTCACGTTTTCAATGGTGTCACTGGGCT 6690 Query 39233 CCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | || || | ||||| | || ||||| || || || |||||||| ||||| Sbjct 6691 CTACTTCAAGTGTGATGGTCTTGCCCGTGAGGGTCTTTACAAAGATCTGCAT 6742 Score = 82.4 bits (90), Expect = 7e-11 Identities = 161/233 (69%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 39054 CAAGCCTCCTCTTAAGCGT-AACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAAT 39112 || ||| ||||| |||| | ||||| | ||| || || |||||||| || ||||| | Sbjct 5828 CATGCCGCCTCT-AAGCCTCAACACAAGATGCAGGGTAGATTCTTTTTGAATGTTATAGT 5886 Query 39113 CGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTC-G 39171 | | ||| || || | || || | ||| || || ||||| || |||||||||||||| | Sbjct 5887 CCGAAAGGGTACGACCATCTTCTAACTGCTTTCCAGCAAAAATCAGACGCTGCTGGTCTG 5946 Query 39172 GTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGAC 39231 ||||| | | |||||||| ||| || |||| | | | || || || | Sbjct 5947 GTGGG-ATACCTTCTTTGTCTTGGATCTTTGCCTTGACATTTTCGATAGTGTCACTTGGT 6005 Query 39232 TCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || || || | ||||| |||| || |||| || |||||||| || ||||| Sbjct 6006 TCAACTTCAAGAGTGATTGTTTTCCCAGTCAATGTCTTAACAAAAATCTGCAT 6058 >seq13072 Length=78421 Score = 84.2 bits (92), Expect = 2e-11 Identities = 150/214 (70%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGG-CAAGTGTTCGTTCGTCATC 39134 || ||||| || ||||| ||||| || ||||| |||||| |||| | || || || || Sbjct 53555 ACAAAATGGAGTGTGCTTTCTTTCTGAATATTGTAATCGCTCAAG-GAACGATCATCCTC 53613 Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194 || || || ||||||||||| | ||||| || || | || | | ||||| ||| Sbjct 53614 CAGTTGCTTCCCCGCAAATATCAACCGCTGTTGCTCTGGCGGTATCCCTTCTTTATCCTG 53673 Query 39195 GATTTTCTGTTTGAGCGTCGCCACCGT-ATCGCTCGACTCCACGTCCACCGTGATACTTT 39253 || |||| ||| | ||| | || |||| | ||| |||| | |||||| |||| Sbjct 53674 AATCTTCTCTTTCACAGTCATTATGGTGTTCGC-AGGCTCAGCGTCGATCGTGATCCTTT 53732 Query 39254 TTCCCGTCAGCGTTTTAACAAAGATTTGCATCTT 39287 | ||||||||||| ||||| | |||||||| Sbjct 53733 TCATTGTCAGCGTTTTCACAAAAAAATGCATCTT 53766 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428793501226145