Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loxosceles_20reclusa_20[genbank_20GCA_5F001188405.1_202015-04-27] 143,665 sequences; 3,262,478,678 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq454 102 7e-17 seq19790 91.5 1e-13 >seq454 Length=212681 Score = 102 bits (112), Expect = 7e-17 Identities = 125/171 (73%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 29674 GTGAGCATCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCAT 29733 ||||||||| || | ||||||||||| ||||| |||| || | ||||| || || || Sbjct 93004 GTGAGCATCCCCTAATGTGTGGACAAAATCTCCAGGTTTGAGGTCAGTGACATGTGCGAT 92945 Query 29734 CATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACCCCGAGCCCCATGTCCCC 29793 ||||| || | || | ||||| || |||||||| || || || | ||||| || || Sbjct 92944 CATGTGTGTCAAAAGGGCATAGCTAGCAATGTTAAATGGTACACCTAAACCCATATCGCC 92885 Query 29794 TGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGCTCACGTAAAACTG 29844 ||||| ||||| | || || || || || || | ||||| |||||||| Sbjct 92884 AGACCTTTGGTACAATTGACATGATAGTTCGCCATTACTCACATAAAACTG 92834 >seq19790 Length=54031 Score = 91.5 bits (100), Expect = 1e-13 Identities = 131/185 (71%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 29660 TGGTCAAGGTAGACGTGAGCATCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCG 29719 |||| || || | |||||||||||| | || |||||||| ||||| |||| || Sbjct 16792 TGGTTCAGATATATGTGAGCATCTCCTATTGTATGGACAAAATCTCCAGGTTTGAGGTTA 16733 Query 29720 GTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACCCCG 29779 ||||| || || ||||||| || | || | ||||| || |||||||| ||||| || Sbjct 16732 GTGACATGTGCGATCATGTGTGTCAAAAGGGCATAGCTAGCAATGTTAAATGGCACACCT 16673 Query 29780 AGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGCTCACGTAA 29839 ||||| || | |||| |||| | || || || || || |||| ||||| ||| Sbjct 16672 CAACCCATATCAGCATACCTTAGGTACATTTGACATGATAGTTCGCCGTTACTCACATAA 16613 Query 29840 AACTG 29844 ||||| Sbjct 16612 AACTG 16608 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405452041872190