Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Loxosceles_20reclusa_20[genbank_20GCA_5F001188405.1_202015-04-27]
143,665 sequences; 3,262,478,678 total letters
Query= NC_030394.2
Length=126965
Score E
Sequences producing significant alignments: (Bits) Value
seq454 102 7e-17
seq19790 91.5 1e-13
>seq454
Length=212681
Score = 102 bits (112), Expect = 7e-17
Identities = 125/171 (73%), Gaps = 0/171 (0%)
Strand=Plus/Minus
Query 29674 GTGAGCATCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCAT 29733
||||||||| || | ||||||||||| ||||| |||| || | ||||| || || ||
Sbjct 93004 GTGAGCATCCCCTAATGTGTGGACAAAATCTCCAGGTTTGAGGTCAGTGACATGTGCGAT 92945
Query 29734 CATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACCCCGAGCCCCATGTCCCC 29793
||||| || | || | ||||| || |||||||| || || || | ||||| || ||
Sbjct 92944 CATGTGTGTCAAAAGGGCATAGCTAGCAATGTTAAATGGTACACCTAAACCCATATCGCC 92885
Query 29794 TGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGCTCACGTAAAACTG 29844
||||| ||||| | || || || || || || | ||||| ||||||||
Sbjct 92884 AGACCTTTGGTACAATTGACATGATAGTTCGCCATTACTCACATAAAACTG 92834
>seq19790
Length=54031
Score = 91.5 bits (100), Expect = 1e-13
Identities = 131/185 (71%), Gaps = 0/185 (0%)
Strand=Plus/Minus
Query 29660 TGGTCAAGGTAGACGTGAGCATCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCG 29719
|||| || || | |||||||||||| | || |||||||| ||||| |||| ||
Sbjct 16792 TGGTTCAGATATATGTGAGCATCTCCTATTGTATGGACAAAATCTCCAGGTTTGAGGTTA 16733
Query 29720 GTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACCCCG 29779
||||| || || ||||||| || | || | ||||| || |||||||| ||||| ||
Sbjct 16732 GTGACATGTGCGATCATGTGTGTCAAAAGGGCATAGCTAGCAATGTTAAATGGCACACCT 16673
Query 29780 AGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGCTCACGTAA 29839
||||| || | |||| |||| | || || || || || |||| ||||| |||
Sbjct 16672 CAACCCATATCAGCATACCTTAGGTACATTTGACATGATAGTTCGCCGTTACTCACATAA 16613
Query 29840 AACTG 29844
|||||
Sbjct 16612 AACTG 16608
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 405452041872190
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |