Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loxosceles_20reclusa_20[genbank_20GCA_5F001188405.1_202015-04-27] 143,665 sequences; 3,262,478,678 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq56889 141 2e-28 >seq56889 Length=12386 Score = 141 bits (156), Expect = 2e-28 Identities = 167/225 (74%), Gaps = 6/225 (3%) Strand=Plus/Plus Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942 |||||||| | ||| ||||| || ||||| ||||| |||||||||||||| | | ||| Sbjct 6521 CCTGAGTCGCAAGACCAGATGTAGGGTAGATTCTTTCTGGATGTTGTAATCTGAAAGAGT 6580 Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002 | |||||||| || ||| || ||||| || | | ||||||||| | | ||| || Sbjct 6581 GCGGCCATCTTCCAGCTGTTTGCCAGCGAAAATTAAACGCTGCTGGTCTGGTGGGATACC 6640 Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTC 152059 ||| || ||||| |||||| || || | || | | |||| ||| ||||||||| Sbjct 6641 TTCTTTGTCTTGGATTTTTGCCTTCACGTTTTCAATGGTGTC---ACTGGGCTCTACTTC 6697 Query 152060 AAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||| || || || ||||||||||| ||||| || |||| |||||| Sbjct 6698 AAGTGTGATGGTCTTGCCCGTGAGGGTCTTTACAAAGATCTGCAT 6742 Score = 127 bits (140), Expect = 5e-24 Identities = 164/225 (73%), Gaps = 6/225 (3%) Strand=Plus/Plus Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942 |||||||| | ||| ||||| || ||||| ||||| |||||||||||||| | | || Sbjct 6065 CCTGAGTCGCAAGACCAGATGTAGGGTAGATTCTTTCTGGATGTTGTAATCTGAAAGCGT 6124 Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002 | |||||||| || ||| || || || || | | ||||||||| | | ||| || Sbjct 6125 GCGGCCATCTTCCAGCTGTTTGCCAGCAAAAATTAAACGCTGCTGGTCTGGTGGGATACC 6184 Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTC 152059 ||| || ||||| |||||| || || | || | | |||| ||| || ||||| Sbjct 6185 TTCTTTGTCTTGGATTTTTGCCTTTACGTTTTCAATGGTGTC---ACTGGGTTCCACTTC 6241 Query 152060 AAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||| || || || ||||||||||| |||||||| |||| |||||| Sbjct 6242 AAGTGTGATGGTCTTGCCCGTGAGGGTCTTCACAAAGATCTGCAT 6286 Score = 98.7 bits (108), Expect = 2e-15 Identities = 152/214 (71%), Gaps = 10/214 (5%) Strand=Plus/Plus Query 151896 ACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCT 151955 |||||||| || ||||| |||||||| ||||| || || | | || | ||||||||| Sbjct 5850 ACAAGATGCAGGGTAGATTCTTTTTGAATGTTATAGTCCGAAAGGGTACGACCATCTTCT 5909 Query 151956 AG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTT 152013 | ||||| || || || || || | ||||||||| | | ||| ||||| || |||| Sbjct 5910 AACTGCTTT--CCAGCAAAAATCAGACGCTGCTGGTCTGGTGGGATACCTTCTTTGTCTT 5967 Query 152014 GAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTC---TCTACTTCAAGAGTAATAG 152070 | || ||| |||||| | || | |||| ||| || ||||||||||| || | Sbjct 5968 GGATCTTTGCCTTGACATTTTCGATAGTGTC---ACTTGGTTCAACTTCAAGAGTGATTG 6024 Query 152071 TTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 |||| || || | ||||| || || | |||||| Sbjct 6025 TTTTCCCAGTCAATGTCTTAACAAAAATCTGCAT 6058 Score = 95.1 bits (104), Expect = 3e-14 Identities = 149/212 (70%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 151896 ACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCT 151955 ||||| || | ||||| |||||||| ||||| || || | | ||| | ||||||||| Sbjct 6306 ACAAGGTGCAAGGTAGATTCTTTTTGAATGTTATAGTCTGAAAGAGTACGACCATCTTCT 6365 Query 151956 AGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGA 152015 | || || || || ||||| | |||||||| | | || |||||||| ||||| Sbjct 6366 AACTGCTTACCAGCAAAAATAAGACGTTGCTGGTCGGGTGGAATGCCTTCCTTGTCTTGG 6425 Query 152016 ATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTC---TCTACTTCAAGAGTAATAGTT 152072 || ||| |||||| | || | |||| ||| || ||||||||||| || ||| Sbjct 6426 ATCTTTGCCTTGACATTTTCGATAGTGTC---ACTTGGTTCAACTTCAAGAGTGATTGTT 6482 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || | ||||| ||||| | |||||| Sbjct 6483 TTCCCAGTCAATGTCTTGACGAAAATCTGCAT 6514 Score = 87.8 bits (96), Expect = 4e-12 Identities = 149/215 (69%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||||| || || || ||||| || |||||||| ||||| ||||| || | || || | Sbjct 6752 GAGTCGTAGAACCAGGTGAAGGGTTGACTCTTTCTGGATATTGTAGTCTGACAAGGTACG 6811 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 ||||||||||| || || || || || | |||||||||||| | | || || || Sbjct 6812 ACCATCTTCTAGTTGCTTGCCAGCAAAAATCAACCTCTGCTGGTCAGGAGGAATACCCTC 6871 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAG 152062 || ||||| ||||| || ||| | || | | | || ||| || || ||||| Sbjct 6872 TTTATCTTGGATTTTAGCCTTCACATTTTCAATGGTATC---ACTGGGTTCAACCTCAAG 6928 Query 152063 AGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGA 152097 || || || ||||| || || || ||||| |||| Sbjct 6929 GGTTATGGTCTTGCCAGTAAGTGTTTTCACAAAGA 6963 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151696953039215