Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Loxosceles_20reclusa_20[genbank_20GCA_5F001188405.1_202015-04-27]
143,665 sequences; 3,262,478,678 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq56889 141 2e-28
>seq56889
Length=12386
Score = 141 bits (156), Expect = 2e-28
Identities = 167/225 (74%), Gaps = 6/225 (3%)
Strand=Plus/Plus
Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942
|||||||| | ||| ||||| || ||||| ||||| |||||||||||||| | | |||
Sbjct 6521 CCTGAGTCGCAAGACCAGATGTAGGGTAGATTCTTTCTGGATGTTGTAATCTGAAAGAGT 6580
Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002
| |||||||| || ||| || ||||| || | | ||||||||| | | ||| ||
Sbjct 6581 GCGGCCATCTTCCAGCTGTTTGCCAGCGAAAATTAAACGCTGCTGGTCTGGTGGGATACC 6640
Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTC 152059
||| || ||||| |||||| || || | || | | |||| ||| |||||||||
Sbjct 6641 TTCTTTGTCTTGGATTTTTGCCTTCACGTTTTCAATGGTGTC---ACTGGGCTCTACTTC 6697
Query 152060 AAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
||| || || || ||||||||||| ||||| || |||| ||||||
Sbjct 6698 AAGTGTGATGGTCTTGCCCGTGAGGGTCTTTACAAAGATCTGCAT 6742
Score = 127 bits (140), Expect = 5e-24
Identities = 164/225 (73%), Gaps = 6/225 (3%)
Strand=Plus/Plus
Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942
|||||||| | ||| ||||| || ||||| ||||| |||||||||||||| | | ||
Sbjct 6065 CCTGAGTCGCAAGACCAGATGTAGGGTAGATTCTTTCTGGATGTTGTAATCTGAAAGCGT 6124
Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002
| |||||||| || ||| || || || || | | ||||||||| | | ||| ||
Sbjct 6125 GCGGCCATCTTCCAGCTGTTTGCCAGCAAAAATTAAACGCTGCTGGTCTGGTGGGATACC 6184
Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTC 152059
||| || ||||| |||||| || || | || | | |||| ||| || |||||
Sbjct 6185 TTCTTTGTCTTGGATTTTTGCCTTTACGTTTTCAATGGTGTC---ACTGGGTTCCACTTC 6241
Query 152060 AAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
||| || || || ||||||||||| |||||||| |||| ||||||
Sbjct 6242 AAGTGTGATGGTCTTGCCCGTGAGGGTCTTCACAAAGATCTGCAT 6286
Score = 98.7 bits (108), Expect = 2e-15
Identities = 152/214 (71%), Gaps = 10/214 (5%)
Strand=Plus/Plus
Query 151896 ACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCT 151955
|||||||| || ||||| |||||||| ||||| || || | | || | |||||||||
Sbjct 5850 ACAAGATGCAGGGTAGATTCTTTTTGAATGTTATAGTCCGAAAGGGTACGACCATCTTCT 5909
Query 151956 AG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTT 152013
| ||||| || || || || || | ||||||||| | | ||| ||||| || ||||
Sbjct 5910 AACTGCTTT--CCAGCAAAAATCAGACGCTGCTGGTCTGGTGGGATACCTTCTTTGTCTT 5967
Query 152014 GAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTC---TCTACTTCAAGAGTAATAG 152070
| || ||| |||||| | || | |||| ||| || ||||||||||| || |
Sbjct 5968 GGATCTTTGCCTTGACATTTTCGATAGTGTC---ACTTGGTTCAACTTCAAGAGTGATTG 6024
Query 152071 TTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|||| || || | ||||| || || | ||||||
Sbjct 6025 TTTTCCCAGTCAATGTCTTAACAAAAATCTGCAT 6058
Score = 95.1 bits (104), Expect = 3e-14
Identities = 149/212 (70%), Gaps = 6/212 (3%)
Strand=Plus/Plus
Query 151896 ACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCT 151955
||||| || | ||||| |||||||| ||||| || || | | ||| | |||||||||
Sbjct 6306 ACAAGGTGCAAGGTAGATTCTTTTTGAATGTTATAGTCTGAAAGAGTACGACCATCTTCT 6365
Query 151956 AGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGA 152015
| || || || || ||||| | |||||||| | | || |||||||| |||||
Sbjct 6366 AACTGCTTACCAGCAAAAATAAGACGTTGCTGGTCGGGTGGAATGCCTTCCTTGTCTTGG 6425
Query 152016 ATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTC---TCTACTTCAAGAGTAATAGTT 152072
|| ||| |||||| | || | |||| ||| || ||||||||||| || |||
Sbjct 6426 ATCTTTGCCTTGACATTTTCGATAGTGTC---ACTTGGTTCAACTTCAAGAGTGATTGTT 6482
Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || | ||||| ||||| | ||||||
Sbjct 6483 TTCCCAGTCAATGTCTTGACGAAAATCTGCAT 6514
Score = 87.8 bits (96), Expect = 4e-12
Identities = 149/215 (69%), Gaps = 6/215 (3%)
Strand=Plus/Plus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||||| || || || ||||| || |||||||| ||||| ||||| || | || || |
Sbjct 6752 GAGTCGTAGAACCAGGTGAAGGGTTGACTCTTTCTGGATATTGTAGTCTGACAAGGTACG 6811
Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005
||||||||||| || || || || || | |||||||||||| | | || || ||
Sbjct 6812 ACCATCTTCTAGTTGCTTGCCAGCAAAAATCAACCTCTGCTGGTCAGGAGGAATACCCTC 6871
Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAG 152062
|| ||||| ||||| || ||| | || | | | || ||| || || |||||
Sbjct 6872 TTTATCTTGGATTTTAGCCTTCACATTTTCAATGGTATC---ACTGGGTTCAACCTCAAG 6928
Query 152063 AGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGA 152097
|| || || ||||| || || || ||||| ||||
Sbjct 6929 GGTTATGGTCTTGCCAGTAAGTGTTTTCACAAAGA 6963
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151696953039215
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |