Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loxosceles_20reclusa_20[genbank_20GCA_5F001188405.1_202015-04-27] 143,665 sequences; 3,262,478,678 total letters Query= NC_031761.1 Length=131855 Score E Sequences producing significant alignments: (Bits) Value seq56889 109 5e-19 seq95420 98.7 8e-16 seq23149 98.7 8e-16 seq8227 87.8 2e-12 >seq56889 Length=12386 Score = 109 bits (120), Expect = 5e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 ||||| ||||||||||| || || || || || ||||| || | ||| ||||||||| Sbjct 5830 ATGCAGATTTTTGTCAAGACTTTAACAGGGAAGACCATAACACTTGAAGTGGAACCCAGT 5771 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 ||| | ||| | || || ||||||| |||||||| ||| ||||| || || Sbjct 5770 GATACAATTGAAAATGTCAAGGCAAAAATTCAGGACAAAGAGGGCATTCCCCCAGACCAG 5711 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279 ||| | ||||||| ||| || || ||| | |||||| ||| || |||| || ||| Sbjct 5710 CAACGTCTTATTTTTGCTGGTAAGCAACTTGAAGATGGCCGAACCCTGTCCGACTACAAT 5651 Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCG 111314 || || ||||| || ||| | ||| | ||| |||| Sbjct 5650 ATCCAGAAAGAGTCCACATTGCATCTTGTGCTGCG 5616 Score = 89.7 bits (98), Expect = 4e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 ||||| ||||| ||||| || ||||| || ||||| || || | ||| ||||| || Sbjct 6514 ATGCAGATTTTCGTCAAGACATTGACTGGGAAAACAATCACTCTTGAAGTTGAACCAAGT 6455 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 || || | | | || || ||| || ||||| |||||| |||| ||| || Sbjct 6454 GACACTATCGAAAATGTCAAGGCAAAGATCCAAGACAAGGAAGGCATTCCACCCGACCAG 6395 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279 ||| | ||||||| ||| || || || || |||||| | ||| | | || ||||| Sbjct 6394 CAACGTCTTATTTTTGCTGGTAAGCAGTTAGAAGATGGTCGTACTCTTTCAGACTATAAC 6335 Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGCA 111328 || |||||||||||||| | || | |||||| | || | || |||| Sbjct 6334 ATTCAAAAAGAATCTACCTTGCACCTTGTGTTGAGGCTTAGAGGAGGCA 6286 Score = 84.2 bits (92), Expect = 2e-11 Identities = 130/186 (70%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 111127 GGCAAAACCATTACCGTGGAAACGGAACCCAGCGATTCTGTTGGCCAGGTAAAACAAAAA 111186 ||||||||||| ||| |||| |||||||| || || | | | || ||| |||| Sbjct 3166 GGCAAAACCATAACCTTGGAGGTTGAACCCAGTGACACTATCGAGAACGTGAAAGCAAAA 3107 Query 111187 ATTGCCGACAAAGAAGGCGTTCCCGTCGATCAACAAAGGCTTATTTATGCGGGCAAACAA 111246 || ||||||||||| |||| || || ||| | ||||||| ||| ||||| || Sbjct 3106 ATACAAGACAAAGAAGGTATTCCTCCAGACCAGCAACGTCTTATTTTTGCAGGCAAGCAG 3047 Query 111247 TTGGAAGATTCTAAAACTATGGCCGATTATAATATACAAAAAGAATCTACACTACATTTA 111306 || |||||| ||| || | || || || ||||| |||||||| ||| | || || Sbjct 3046 TTAGAAGATGGCCGAACACTGTCAGACTACAACATACAGAAAGAATCCACATTGCACTTG 2987 Query 111307 GTGTTG 111312 || ||| Sbjct 2986 GTTTTG 2981 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 ||||| || ||||| || || | || ||||| ||||| || | ||| ||||||||| Sbjct 6286 ATGCAGATCTTTGTGAAGACCCTCACGGGCAAGACCATCACACTTGAAGTGGAACCCAGT 6227 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 || | ||| | ||||| |||||| ||||||||||| | || || || Sbjct 6226 GACACCATTGAAAACGTAAAGGCAAAAATCCAAGACAAAGAAGGTATCCCACCAGACCAG 6167 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279 || | | |||| ||| |||||||| |||||||| || | | ||||| || Sbjct 6166 CAGCGTTTAATTTTTGCTGGCAAACAGCTGGAAGATGGCCGCACGCTTTCAGATTACAAC 6107 Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGCA 111328 || || ||||||||||| |||||| | || ||||| || | || |||| Sbjct 6106 ATCCAGAAAGAATCTACCCTACATCTGGTCTTGCGACTCAGGGGAGGCA 6058 >seq95420 Length=6446 Score = 98.7 bits (108), Expect = 8e-16 Identities = 162/232 (70%), Gaps = 5/232 (2%) Strand=Plus/Minus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 |||||| | ||||| ||||| ||||| || ||||| || || | || |||| | Sbjct 264 ATGCAATTATTTGTGAAAACTTTGACTGGAAAAACAATCACTATCGATGTTCAACCAACA 205 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 ||| || ||| || || || | ||| ||||||||||| |||| |||||| Sbjct 204 GATACTATTGAAAGTGTGCAAAAATATATTCAAGACAAAGAAGGAATTCCACCCGATCAG 145 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATT---GGAAGATTCTAAAACTA--TGGCCGATT 111274 ||| | ||||||| ||| |||||||| || ||| |||| ||| | || | ||||| Sbjct 144 CAACGACTTATTTTTGCTGGCAAACAGTTAGAGGATGATTATAATATTAATTAAGCGATT 85 Query 111275 ATAATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326 ||||||| ||||||||| || ||||| | || ||| | ||| | ||||| Sbjct 84 ATAATATTCAAAAAGAAAACACTTTACATCTTGTTTTGAGACTGAGAGGTGG 33 >seq23149 Length=43904 Score = 98.7 bits (108), Expect = 8e-16 Identities = 160/229 (70%), Gaps = 10/229 (4%) Strand=Plus/Minus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 |||||| | ||||| ||||| |||| || ||||| || || | || |||| | Sbjct 20063 ATGCAATTATTTGTGAAAACTTTGAATGGAAAAACAATCACTATCGATGTTCAACCAA-- 20006 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 || ||| || ||| || ||||| ||||||||||| |||| |||||| Sbjct 20005 ----CTATTGAAAGTGTTAAAAAACAAATTCAAGACAAAGAAGGAATTCCACCCGATCAG 19950 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTA--AAACTATGGCCGATTATA 111277 ||| ||||||||| ||| |||||||| ||||| ||| || | | || | |||||||| Sbjct 19949 CAACGGCTTATTTTTGCTGGCAAACAGTTGGAGGATGATAGGATATTAAG--CGATTATA 19892 Query 111278 ATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326 |||| ||||||||| || ||||| | || ||| | ||| | ||||| Sbjct 19891 ATATTCAAAAAGAAAACACTTTACATCTTGTTTTGAGACTGAGAGGTGG 19843 >seq8227 Length=99420 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/211 (70%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCC--A 111157 |||||| ||||||| ||||| ||||| |||||||| || || | || | || ||| | Sbjct 16957 ATGCAATTTTTTGTGAAAACATTGACAGGCAAAACGATCACGATCGACGCTGAGCCCGCA 17016 Query 111158 GCGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATC 111217 | || | | || || ||| | |||||| ||||||||||| | || |||| Sbjct 17017 GACATCATAAAGTCC--GTGAAAGAGAAAATTCAAGACAAAGAAGGTATACCTCCAGATC 17074 Query 111218 AACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATA 111277 ||||| || | || | ||||| || ||| |||| | | || || || |||||| | Sbjct 17075 AACAACGGTTAATCTTTGCGGAGAAGCAACTGGAGGGCGATCAATCTTTGAACGATTACA 17134 Query 111278 ATATACAAAAAGAATCTACACTACATTTAGT 111308 |||| || ||||| |||||| |||||||| Sbjct 17135 ATATTCAGAAAGAGAGTACACTCCATTTAGT 17165 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421072643520040