Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Loxosceles_20reclusa_20[genbank_20GCA_5F001188405.1_202015-04-27]
143,665 sequences; 3,262,478,678 total letters
Query= NC_031761.1
Length=131855
Score E
Sequences producing significant alignments: (Bits) Value
seq56889 109 5e-19
seq95420 98.7 8e-16
seq23149 98.7 8e-16
seq8227 87.8 2e-12
>seq56889
Length=12386
Score = 109 bits (120), Expect = 5e-19
Identities = 153/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159
||||| ||||||||||| || || || || || ||||| || | ||| |||||||||
Sbjct 5830 ATGCAGATTTTTGTCAAGACTTTAACAGGGAAGACCATAACACTTGAAGTGGAACCCAGT 5771
Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219
||| | ||| | || || ||||||| |||||||| ||| ||||| || ||
Sbjct 5770 GATACAATTGAAAATGTCAAGGCAAAAATTCAGGACAAAGAGGGCATTCCCCCAGACCAG 5711
Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279
||| | ||||||| ||| || || ||| | |||||| ||| || |||| || |||
Sbjct 5710 CAACGTCTTATTTTTGCTGGTAAGCAACTTGAAGATGGCCGAACCCTGTCCGACTACAAT 5651
Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCG 111314
|| || ||||| || ||| | ||| | ||| ||||
Sbjct 5650 ATCCAGAAAGAGTCCACATTGCATCTTGTGCTGCG 5616
Score = 89.7 bits (98), Expect = 4e-13
Identities = 157/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159
||||| ||||| ||||| || ||||| || ||||| || || | ||| ||||| ||
Sbjct 6514 ATGCAGATTTTCGTCAAGACATTGACTGGGAAAACAATCACTCTTGAAGTTGAACCAAGT 6455
Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219
|| || | | | || || ||| || ||||| |||||| |||| ||| ||
Sbjct 6454 GACACTATCGAAAATGTCAAGGCAAAGATCCAAGACAAGGAAGGCATTCCACCCGACCAG 6395
Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279
||| | ||||||| ||| || || || || |||||| | ||| | | || |||||
Sbjct 6394 CAACGTCTTATTTTTGCTGGTAAGCAGTTAGAAGATGGTCGTACTCTTTCAGACTATAAC 6335
Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGCA 111328
|| |||||||||||||| | || | |||||| | || | || ||||
Sbjct 6334 ATTCAAAAAGAATCTACCTTGCACCTTGTGTTGAGGCTTAGAGGAGGCA 6286
Score = 84.2 bits (92), Expect = 2e-11
Identities = 130/186 (70%), Gaps = 0/186 (0%)
Strand=Plus/Minus
Query 111127 GGCAAAACCATTACCGTGGAAACGGAACCCAGCGATTCTGTTGGCCAGGTAAAACAAAAA 111186
||||||||||| ||| |||| |||||||| || || | | | || ||| ||||
Sbjct 3166 GGCAAAACCATAACCTTGGAGGTTGAACCCAGTGACACTATCGAGAACGTGAAAGCAAAA 3107
Query 111187 ATTGCCGACAAAGAAGGCGTTCCCGTCGATCAACAAAGGCTTATTTATGCGGGCAAACAA 111246
|| ||||||||||| |||| || || ||| | ||||||| ||| ||||| ||
Sbjct 3106 ATACAAGACAAAGAAGGTATTCCTCCAGACCAGCAACGTCTTATTTTTGCAGGCAAGCAG 3047
Query 111247 TTGGAAGATTCTAAAACTATGGCCGATTATAATATACAAAAAGAATCTACACTACATTTA 111306
|| |||||| ||| || | || || || ||||| |||||||| ||| | || ||
Sbjct 3046 TTAGAAGATGGCCGAACACTGTCAGACTACAACATACAGAAAGAATCCACATTGCACTTG 2987
Query 111307 GTGTTG 111312
|| |||
Sbjct 2986 GTTTTG 2981
Score = 84.2 bits (92), Expect = 2e-11
Identities = 156/229 (68%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159
||||| || ||||| || || | || ||||| ||||| || | ||| |||||||||
Sbjct 6286 ATGCAGATCTTTGTGAAGACCCTCACGGGCAAGACCATCACACTTGAAGTGGAACCCAGT 6227
Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219
|| | ||| | ||||| |||||| ||||||||||| | || || ||
Sbjct 6226 GACACCATTGAAAACGTAAAGGCAAAAATCCAAGACAAAGAAGGTATCCCACCAGACCAG 6167
Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279
|| | | |||| ||| |||||||| |||||||| || | | ||||| ||
Sbjct 6166 CAGCGTTTAATTTTTGCTGGCAAACAGCTGGAAGATGGCCGCACGCTTTCAGATTACAAC 6107
Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGCA 111328
|| || ||||||||||| |||||| | || ||||| || | || ||||
Sbjct 6106 ATCCAGAAAGAATCTACCCTACATCTGGTCTTGCGACTCAGGGGAGGCA 6058
>seq95420
Length=6446
Score = 98.7 bits (108), Expect = 8e-16
Identities = 162/232 (70%), Gaps = 5/232 (2%)
Strand=Plus/Minus
Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159
|||||| | ||||| ||||| ||||| || ||||| || || | || |||| |
Sbjct 264 ATGCAATTATTTGTGAAAACTTTGACTGGAAAAACAATCACTATCGATGTTCAACCAACA 205
Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219
||| || ||| || || || | ||| ||||||||||| |||| ||||||
Sbjct 204 GATACTATTGAAAGTGTGCAAAAATATATTCAAGACAAAGAAGGAATTCCACCCGATCAG 145
Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATT---GGAAGATTCTAAAACTA--TGGCCGATT 111274
||| | ||||||| ||| |||||||| || ||| |||| ||| | || | |||||
Sbjct 144 CAACGACTTATTTTTGCTGGCAAACAGTTAGAGGATGATTATAATATTAATTAAGCGATT 85
Query 111275 ATAATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326
||||||| ||||||||| || ||||| | || ||| | ||| | |||||
Sbjct 84 ATAATATTCAAAAAGAAAACACTTTACATCTTGTTTTGAGACTGAGAGGTGG 33
>seq23149
Length=43904
Score = 98.7 bits (108), Expect = 8e-16
Identities = 160/229 (70%), Gaps = 10/229 (4%)
Strand=Plus/Minus
Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159
|||||| | ||||| ||||| |||| || ||||| || || | || |||| |
Sbjct 20063 ATGCAATTATTTGTGAAAACTTTGAATGGAAAAACAATCACTATCGATGTTCAACCAA-- 20006
Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219
|| ||| || ||| || ||||| ||||||||||| |||| ||||||
Sbjct 20005 ----CTATTGAAAGTGTTAAAAAACAAATTCAAGACAAAGAAGGAATTCCACCCGATCAG 19950
Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTA--AAACTATGGCCGATTATA 111277
||| ||||||||| ||| |||||||| ||||| ||| || | | || | ||||||||
Sbjct 19949 CAACGGCTTATTTTTGCTGGCAAACAGTTGGAGGATGATAGGATATTAAG--CGATTATA 19892
Query 111278 ATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326
|||| ||||||||| || ||||| | || ||| | ||| | |||||
Sbjct 19891 ATATTCAAAAAGAAAACACTTTACATCTTGTTTTGAGACTGAGAGGTGG 19843
>seq8227
Length=99420
Score = 87.8 bits (96), Expect = 2e-12
Identities = 147/211 (70%), Gaps = 4/211 (2%)
Strand=Plus/Plus
Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCC--A 111157
|||||| ||||||| ||||| ||||| |||||||| || || | || | || ||| |
Sbjct 16957 ATGCAATTTTTTGTGAAAACATTGACAGGCAAAACGATCACGATCGACGCTGAGCCCGCA 17016
Query 111158 GCGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATC 111217
| || | | || || ||| | |||||| ||||||||||| | || ||||
Sbjct 17017 GACATCATAAAGTCC--GTGAAAGAGAAAATTCAAGACAAAGAAGGTATACCTCCAGATC 17074
Query 111218 AACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATA 111277
||||| || | || | ||||| || ||| |||| | | || || || |||||| |
Sbjct 17075 AACAACGGTTAATCTTTGCGGAGAAGCAACTGGAGGGCGATCAATCTTTGAACGATTACA 17134
Query 111278 ATATACAAAAAGAATCTACACTACATTTAGT 111308
|||| || ||||| |||||| ||||||||
Sbjct 17135 ATATTCAGAAAGAGAGTACACTCCATTTAGT 17165
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421072643520040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |