Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loxosceles_20reclusa_20[genbank_20GCA_5F001188405.1_202015-04-27] 143,665 sequences; 3,262,478,678 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq56889 131 1e-25 seq11758 93.3 3e-14 >seq56889 Length=12386 Score = 131 bits (144), Expect = 1e-25 Identities = 168/232 (72%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || || |||| ||| ||||| || || || || || |||||||||||||| Sbjct 6056 CATGCCTCCCCTGAGTCGCAAGACCAGATGTAGGGTAGATTCTTTCTGGATGTTGTAATC 6115 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | || ||| | || |||||||| || || ||||| || ||||||||||| |||| Sbjct 6116 TGAAAGCGTGCGGCCATCTTCCAGCTGTTTGCCAGCAAAAATTAAACGCTGCTGGTCTGG 6175 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 || | |||||| || || || || ||| | || | |||||||| || ||| Sbjct 6176 TGGGATACCTTCTTTGTCTTGGATTTTTGCCTTTACGTTTTCAATGGTGTCACTGGGTTC 6235 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 ||| || | || || ||||| ||||||||||||||||| ||||| |||||| Sbjct 6236 CACTTCAAGTGTGATGGTCTTGCCCGTGAGGGTCTTCACAAAGATCTGCATG 6287 Score = 114 bits (126), Expect = 9e-21 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || || |||| ||| ||||| || || || || || |||||||||||||| Sbjct 6512 CATGCCTCCCCTGAGTCGCAAGACCAGATGTAGGGTAGATTCTTTCTGGATGTTGTAATC 6571 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | || ||| | || |||||||| || || || || || ||||||||||| |||| Sbjct 6572 TGAAAGAGTGCGGCCATCTTCCAGCTGTTTGCCAGCGAAAATTAAACGCTGCTGGTCTGG 6631 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 || | |||||| || || || || ||||| || | |||||||| || || Sbjct 6632 TGGGATACCTTCTTTGTCTTGGATTTTTGCCTTCACGTTTTCAATGGTGTCACTGGGCTC 6691 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || | || || ||||| |||||||||||||| || ||||| ||||| Sbjct 6692 TACTTCAAGTGTGATGGTCTTGCCCGTGAGGGTCTTTACAAAGATCTGCAT 6742 >seq11758 Length=86814 Score = 93.3 bits (102), Expect = 3e-14 Identities = 167/242 (69%), Gaps = 4/242 (2%) Strand=Plus/Minus Query 44101 TTATTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTT 44160 || |||| |||| |||| || |||| || || || | ||| | || || || || || Sbjct 33394 TTCTTTCGTTCCGCCTCGAAGCCTCAGTACGAGATGGAATGTGTTATCTTTCTGAATATT 33335 Query 44161 GTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTG 44220 ||| ||| | || ||||| ||||| |||||||| ||||||||||| ||||| || Sbjct 33334 GTAGTCGCGCAAAGAACGATCGTCCTCCAGTTGCTTCCCCGCAAAGATCAACCGCTGTTG 33275 Query 44221 ATCTGAAGGCACACCTTCCTTTTCC--GTTATCTTCTGCTTCAATGTTCCTATGGTGTCG 44278 ||||| ||| | |||||| || ||| ||| | ||| | || || ||| ||||| Sbjct 33274 ATCTGGAGGTATACCTTCTTTATCCTGGTTTTTCTCTTCCACAGACTT--TATAGTGTCT 33217 Query 44279 GCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 | || | || | ||| ||||| ||||| || | || ||||| || | |||||| Sbjct 33216 GTCAGCTCAGCGTCGATCGTGATCGTTTTTCCTGTCAAAGTTTTCACAAAAAATTGCATC 33157 Query 44339 AT 44340 || Sbjct 33156 AT 33155 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359360086621305