Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28]
1,713 sequences; 434,128,924 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq869 156 4e-33
seq1266 84.2 2e-11
>seq869
Length=1271022
Score = 156 bits (172), Expect = 4e-33
Identities = 413/624 (66%), Gaps = 20/624 (3%)
Strand=Plus/Minus
Query 16798 ATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGACGTAC 16857
||| || |||||||||||||||| ||||||||| || ||||| ||||| | | ||
Sbjct 484139 ATCGGCCACAAATTCTATATATTCCGACATTAATTTACAATTCATGCCTATCAAATTGAC 484080
Query 16858 CGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATACTAGC 16917
|| | ||| || || | ||| || || || |||||||| | ||||| |
Sbjct 484079 GGGCAAAGCATCTGTAAGGAATTCCTGTTCAATTTTCACCGCTTCAGTGATAATTTCAAT 484020
Query 16918 AACTCGTTC----CTCGGACGGTGTATGTTTAAGATGTTTAAACA-TCAGACATGCGAAA 16972
|| || || || ||||| |||| | ||||||||||| | | ||| || |||
Sbjct 484019 AATTCTCTCTCGACTGGGACGTTGTACC----AAATGTTTAAACATTAATACA-GCAAAA 483965
Query 16973 TCGCAATGTAATCCCTCGTCTC-TGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCAT 17031
|| |||||||| ||||| || | || | || | || || || ||||| | || |||||
Sbjct 483964 TCACAATGTAAACCCTCATCACGTGAT-ATCAACTCATTGGAGAATGTAAGACCAGGCAT 483906
Query 17032 CTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTC 17091
|| |||||||||| |||||| || | || || ||| |||||| ||||||||
Sbjct 483905 AAGACCACGTTTCTTTAGCCAAAAGATGGAAGCAAAACTGCCACTAAAGAAAATACCCTC 483846
Query 17092 GACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATTT 17151
|| | ||||| || || | ||||| | | | || ||| | ||||||
Sbjct 483845 TACAGCAGCAAAAGCAATAATACGTTCACCAAAATTTGCTGATTTCGAAGAAATCCAAGC 483786
Query 17152 CTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAA----ATA 17207
| |||| ||||| || |||| | ||| ||||| || || |||| |||
Sbjct 483785 CATTGCCCAATCGGCCTTACGCTTAACAGCTGGCATAGTTTCAATAGCATTAAAGAGATA 483726
Query 17208 ATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGG 17267
|| | || || | | || | ||||| |||| || || | || |||||||| |
Sbjct 483725 ATCACGCTGTTCAC----GATCCTTAATATAACTATCAATTAGAATACTATACATTTCAG 483670
Query 17268 AGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAA 17327
|||||| || |||||||| || ||||| || || || || || || || | | ||| |
Sbjct 483669 AGTGTACATTTTCCATGGCAATTTGAAAGCCATAGAAACAGCGTGCCTCTGTAACTTGTA 483610
Query 17328 CTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAA 17387
|||| |||| ||||| | |||||||| || || ||||| ||| |||||||| |
Sbjct 483609 CTTCTTGAGAGAAACGTTCGACAAGATTTTCATTGACAATGCCATCGGAAGCGGCGAAGA 483550
Query 17388 ACGCCAATATATGCTTAATGAAAT 17411
| || | | ||| ||||||||
Sbjct 483549 AAGCAAGAACATGTGAAATGAAAT 483526
>seq1266
Length=2164085
Score = 84.2 bits (92), Expect = 2e-11
Identities = 90/119 (76%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 119936 TCAGGAGTCTCGCTCCATTCCAGTAtttttttAGCCCAGTACATACGTAAGTATCCATGC 119995
|| |||| || ||||||| | ||||| |||||||| ||||| ||||| | ||||||
Sbjct 369141 TCGGGAGATTCTGTCCATTCTAAGATTTTCTTAGCCCAATACATGCGTAAAAAGCCATGC 369082
Query 119996 ATTTTACCTTCACGAACCATTTGAAGTTGTGCGGCGTTCCATAAGGGATCGTGTGTACG 120054
|||||||| ||| ||||| || ||||| || | |||||||| ||| || |||||
Sbjct 369081 ATTTTACCCTCATTAACCAGCTGCAGTTGCGCAGAATTCCATAAATCATCATGGGTACG 369023
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517534518054840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |