Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= NC_001317.1 Length=30624 Score E Sequences producing significant alignments: (Bits) Value seq87 91.5 3e-14 >seq87 Length=489008 Score = 91.5 bits (100), Expect = 3e-14 Identities = 86/106 (81%), Gaps = 8/106 (8%) Strand=Plus/Minus Query 20930 AACAAAAAGGCCACTCGAG--AGAGTGGCCTAACTGTATGT--ATTTACTA-CTTAAATT 20984 |||||||| |||||| | |||||| ||| |||| ||||| | || ||||| Sbjct 311616 AACAAAAAAGCCACTTCTTTCAAAGTGGCTTAA---TATGCTGATTTAACAGCTAAAATT 311560 Query 20985 TGGTGGCCCCTGCTGGACTTGAACCAGCGACCAAGCGATTATGAGT 21030 |||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 311559 TGGTGGCCCCTGCTGGACTTGAACCAGCGACCAATCGATTATGAGT 311514 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 97873209034916