Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= NC_002649.1 Length=21129 Score E Sequences producing significant alignments: (Bits) Value seq1089 93.3 6e-15 >seq1089 Length=16580 Score = 93.3 bits (102), Expect = 6e-15 Identities = 99/131 (76%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 11414 TATAAAAAGGAATTTGAAACCAAGTTCATTAAACATTTCTACTTTAGGGAAATTGGTTTC 11473 || ||||| ||||||||||||| || || ||||||||| | | |||||||| || Sbjct 5340 TACAAAAAACAATTTGAAACCAATTTTATACGTCATTTCTACATGCGTGAAATTGGGTTT 5399 Query 11474 GAGACAGAAGGTAGATTTAAATTCGCACTAGAAGAATGGTTAAATTTAAATATGCCTTAC 11533 || |||||||| ||||| ||| || ||| |||||||||| | || |||||||| Sbjct 5400 GAAACAGAAGGACTTTTTAAGTTCTATCTGGAAACATGGTTAAATATTAACATGCCTTAT 5459 Query 11534 TGGAATAAAAT 11544 ||||| ||||| Sbjct 5460 TGGAACAAAAT 5470 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 67493063167948