Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq1303 176 4e-39 >seq1303 Length=344040 Score = 176 bits (194), Expect = 4e-39 Identities = 381/564 (68%), Gaps = 6/564 (1%) Strand=Plus/Minus Query 20213 AAGAGGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATG 20272 ||||||| |||||||||||||||||||| || |||||| | |||||||| || ||||| Sbjct 96266 AAGAGGGTGATTTGGGTCCTGTGTATGGTTTCCAATGGCGTCATTTTGGTGCCAAATATC 96207 Query 20273 TTGACATGAACACAA--ATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAA 20330 || || ||| | |||| | | || || ||||| | | | || || || Sbjct 96206 GC-ACTTGC-CACGATGATTACTCCAATGAGGGTGTGGATCAGCTGAAGGAGGTCATCAA 96149 Query 20331 TTTAATTAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGA 20390 | ||| || || || || || || | |||||| | | |||||||| || || Sbjct 96148 TACAATACGTACTAATCCCAATGATCGACGTATTATTATGTCAGCCTGGAATCCTCTCGA 96089 Query 20391 TGTGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGC-CAATTTTACGTTGCTAATA 20449 | | || |||||||||||| || |||||| || | || ||||| || || || ||| Sbjct 96088 TATACCACAAATGGCTTTGCCGCCCTGTCAT-TGTTTGGCACAATTCTATGTGGCAAATG 96030 Query 20450 ATGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCA 20509 |||| | || || || |||| ||||| |||||| ||||| |||||||| || || | Sbjct 96029 GTGAACTATCATGCCAGTTGTACCAACGCAGCGCTGACATGGGTCTGGGTGTACCATTTA 95970 Query 20510 ATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAAAACGG 20569 |||| || ||||| | || || ||||||||||| ||| |||| | ||| ||| | | Sbjct 95969 ATATAGCTTCATATGCTTTACTAACATATATGATTGCTCATATTACCGGTTTGAAACCAG 95910 Query 20570 GTGACTTAGTCCACACCATAGGAGACGCGCATATTTACCTTAATCATATAGAACCTTTAA 20629 | || || | || |||| || || | ||| |||| |||||||| |||||||| | Sbjct 95909 GAGATTTTATTCATACCACTGGTGATACTCATGTTTATAAGAATCATATTGAACCTTTGA 95850 Query 20630 AATTACAGTTAACACGACAACCAAAACAATTCCCAACTCTTCGCATTACTCGAACTGTTA 20689 | ||| || | ||| ||||| | ||||| | | | || | || |||| Sbjct 95849 AGGAACAATTGAAACGTAAACCACGTCCTTTCCCTAAATTGCTTATAAAACGTGAAGTTA 95790 Query 20690 AAGATATTAACGATTTTAAAGCTGATGATTTTGTGTTAGAAGGTTATAATCCCCATAATT 20749 | ||||| | ||||| ||| ||| ||||||| | | || ||||| || || Sbjct 95789 AGGATATAGAGGATTTCAAATTTGAAGATTTTGAAATTGTCGGCTATAAACCTTATCCAA 95730 Query 20750 CAATTCCAATGGAAATGTCTGTTT 20773 ||| |||||||||| |||||| Sbjct 95729 AAATAGAAATGGAAATGGCTGTTT 95706 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399175666160785