Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= NC_003356.1 Length=42575 Score E Sequences producing significant alignments: (Bits) Value seq87 82.4 2e-11 >seq87 Length=489008 Score = 82.4 bits (90), Expect = 2e-11 Identities = 65/77 (84%), Gaps = 1/77 (1%) Strand=Plus/Plus Query 17158 GGCCCTTTAGCTAAGT-GGTGAGAGCGAGCGACTCATAATCGCCAGGTCGCTGGTTCAAA 17216 ||||| |||||| ||| ||| ||||| ||||||||||||| |||||||||||||| Sbjct 311483 GGCCCCTTAGCTCAGTTGGTTAGAGCAGTCGACTCATAATCGATTGGTCGCTGGTTCAAG 311542 Query 17217 TCCAGCAAGGGCCACCA 17233 ||||||| ||||||||| Sbjct 311543 TCCAGCAGGGGCCACCA 311559 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 136115631096522