Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28]
1,713 sequences; 434,128,924 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq1348 585 3e-162
seq869 304 2e-77
seq1394 114 2e-20
seq583 107 3e-18
>seq1348
Length=1847788
Score = 585 bits (648), Expect = 3e-162
Identities = 1503/2268 (66%), Gaps = 32/2268 (1%)
Strand=Plus/Plus
Query 64839 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 64898
|| |||||||| | | || || ||||| || | | ||| ||||| || || ||||
Sbjct 1698168 GTAAATTGAATAGCATTGGCGGCTGGTTTTGTTCTCAAATAATACATGCCGGTCTTTAAG 1698227
Query 64899 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 64958
|| |||| | || ||||| || || | |||| ||| | || || || | |
Sbjct 1698228 CCTGATTTCCAGGCATAGAAATGTATGGAGGTCAATTTGCCGTAATTTGGCTCGGCCACA 1698287
Query 64959 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 65018
|| ||||| | |||||||||||||| ||||| || || | ||| |||||||||| ||||
Sbjct 1698288 TGTATATTGAACGATTGACTTTGATCTATGAAAGCGCCACGGTCGGCAGCCATTTGTATG 1698347
Query 65019 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAAC-TCGCTTAATATCTTCTGGAAG 65077
| ||||| | ||| ||||||| ||||| || | || | || ||| || || |
Sbjct 1698348 GTGGTCTTAACGGAAATCTCCCAAACTGTTTTGTATAGATCACGTA-TATGTTTGGGTAT 1698406
Query 65078 GT-TTGTATTC--TGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATT 65134
| || ||| || ||||| || | || | ||||| |||| || || |||||||
Sbjct 1698407 TTCTTCTATGGCTTGTATGGAGCCGCGATTGGAAATAATTTTATTTTTCATTTCATCATC 1698466
Query 65135 CCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCC 65194
|||||| | ||||||||| || |||| | ||| |||| || || | ||||||||
Sbjct 1698467 CCATAAATCAAGTTCGGTTAAATCTTTAAGCAAATGATGATTGACAACATTGAATTCTCC 1698526
Query 65195 AGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCC 65254
||||| || | | ||||||||||||| ||| |||||||| | || ||||| || ||
Sbjct 1698527 CGACAAAACACGTCTAGTGTAAATATTAGAGGTGTACGGTTCAAAGGATTCATTGTTGCC 1698586
Query 65255 CAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACC 65314
| |||||| || || || || || ||||| || || | | ||| ||| | | |||
Sbjct 1698587 TAGAATTTGTGCGGTCGAAGCTGTGGGCATTGGGGCTAATAGCAAAGAATTGCGTACACC 1698646
Query 65315 GTATGTT--CTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACN 65372
||||| |||||||| || || | | ||| ||||| | || | |||
Sbjct 1698647 --ATGTTGACTGATTTTCTCCTTCAACTCTGACCAGTTCCACAAGTCTGTGGGTGTTTTA 1698704
Query 65373 NNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGC-GTACGATCCTACATATGTATCGTA 65431
|||||| ||||| ||||| | | || | || ||| || || ||
Sbjct 1698705 TTCCACATATCATATTGTAGTATACCCTTACTTACTGGAC-AGCCGGGATAAGTTTCATA 1698763
Query 65432 TGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTC 65491
|| || || || || || | ||||||||| || || || || || |||||||| |||||
Sbjct 1698764 TGTGCCATCTTTTTCGGCCAATTCACAACTAGCTTCCAAAGCGCCATAATAAATAGTTTC 1698823
Query 65492 GAAGATCTTCTTATTTAGATCTTGTGC--TTCCAGGCTATCAAATGGATAATTTAAGAGA 65549
||| |||| | ||||| ||| || || || ||| | || ||| | | |
Sbjct 1698824 GAAAATCTGTTGATTTAACAAAAATGCCTTTTCA--CTCTCATAGGGGTAACGCATTAAA 1698881
Query 65550 ATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAG 65609
|| || | || || || || |||||||| ||||| ||||| | ||| | | ||| ||
Sbjct 1698882 ATCAAAGTATCGGCAAAACCCTGAACACCTATACCAATAGGACGATGACGCAAATTGGAC 1698941
Query 65610 ATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACA 65669
|| |||||| || | |||||| | || || || || ||||| |||||||| || |
Sbjct 1698942 TTTCTAGCTTCGGGCAACGGATAAAAGTTGATGTCGATGATTTTGTTGAGATTCTTGGTA 1699001
Query 65670 ATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCTCATCTA---TTACAAAC 65726
|| ||||| |||| |||| ||| |||||||| || ||| | ||||||
Sbjct 1699002 ATAACTTTTGTAACATTTTTCAATTTTTTGAAATCAAAGGTCTTTTCTGGCGTGACAAAC 1699061
Query 65727 ATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGT 65786
|| || | |||| || |||| ||||||||| |||| ||||| || | | ||||| |
Sbjct 1699062 ATATTAAGGGCAATGGAGGCCAAATTACAAACAGCTATCTCATCAGGGGCAGAATATTCT 1699121
Query 65787 ATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTT 65846
| ||||| ||||| | || || ||||| ||||| || | ||||| || || || ||
Sbjct 1699122 ACAATCTCTGTGCATAAGTTGCTGCACTTAATGGTGCCAATGTTTTGCTGGTTGCTTTTG 1699181
Query 65847 TTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATA 65906
||| || ||||| || || | || | || ||||| ||||||| |||| ||| ||
Sbjct 1699182 CGGTTGCAAGCATCTTTGTACAACATATAGGGTGTACCGGTTTCAACTTGAGCTTCAATT 1699241
Query 65907 ATCGCTTTCCAGACGACTCGAGCCTTTATTATA-GATTTGTATCTCTTTTCTCTTTCGTA 65965
|| || ||| | | |||| || | | |||| | | || || || |||| ||
Sbjct 1699242 ATAGCAAACCAAAGAGCCTGAGCTTTGACGGTGCGATTGGCTTTTCCTT-CTTTTTCATA 1699300
Query 65966 TAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATC 66025
||||||||| ||||||||| || |||||||||| | || || ||||||| |
Sbjct 1699301 CTTGGTATACAATTCTTCGAACTCCTCACCCCAAACATCCTGCAGACCGGGACATTTGTG 1699360
Query 66026 CGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAAT 66085
|||||||| | ||||| || || | || | ||| ||||||||||| | || || ||
Sbjct 1699361 TGGACACATTAGGGACCAGTCACCATTTTCTTCCACACGTTTCATAAACAAGTCGGGTAT 1699420
Query 66086 CCAAAGAGCTATA-AATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAA 66144
||| ||||| ||| || | |||||||| |||||| || || || || ||||| || || |
Sbjct 1699421 CCACAGAGC-ATAGAAAAGATCTCTGGCTCTATGCTCTTCCTTGCCGGTATTTTTCTTTA 1699479
Query 66145 GATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAG 66204
||| | || | | |||||| ||||||| || ||||| || || || | | ||||
Sbjct 1699480 AATCCAAAAATTCAAAAATATCTGAATGCCAAGGCTCCAAATAAATAGCAAAGGCACCAG 1699539
Query 66205 GCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTG 66264
| |||||| || |||||||| | || | || || ||| | || || | |||||
Sbjct 1699540 GGCGTTTGCCACCACCCTGATCAACATAGCGGGCTACATTGTTAAACACCCTGAGCATTG 1699599
Query 66265 GAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAAT-- 66322
| | | |||||| || || || || || ||| || | | || | || | ||
Sbjct 1699600 GTACCAGACCATTTGAGGTGCCGTTTGTGCCGTCAATGGAAGTGCCCTTGGCCCTTATGC 1699659
Query 66323 ATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAA 66382
| | || | || || || || || ||| ||| || || | || ||| ||| |
Sbjct 1699660 AGT-GTACGT-TTATGCCAATACCACCCGCCGATTTGGATATCATGGCACATTGTTCCAC 1699717
Query 66383 CGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACAT 66442
| | | || ||||| ||| ||| ||| |||| | | || ||||| ||||
Sbjct 1699718 TGACTTGAAAATACCCTCAATAGAATCGGCCACCATGGTCAATAAGAAACACGACGACAA 1699777
Query 66443 TTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTC 66502
|| | | | | || | || || || ||||| || || || ||||| | ||
Sbjct 1699778 CTGCGGTCTATTGGTAGCAGCCGCGAACAATGTAGGCGACGCATGGGTAAAATAACGCTC 1699837
Query 66503 AGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGC 66562
||| | | ||| || || |||||||| || || ||||| | ||| || |||| ||
Sbjct 1699838 AGACAACAAATTATAAGTTTCAATAGCCGAATCAATATCGTCTCCATGTATACCTATAGC 1699897
Query 66563 GACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTA 66622
|| | ||||||||| ||||| ||||| ||||| ||||| || ||||| | ||| ||
Sbjct 1699898 TACTCTCATTAACATATGCTGTGGTCTCTCAACAATCTTACCATTCATTTTTAGCAAATA 1699957
Query 66623 GGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAAT 66682
||| | |||| ||||| || || || |||||||| |||||| || || ||||||||
Sbjct 1699958 AGATCTCTCCAGTGTTTTGAAGCCGAAGTAGTTGTAGCCAAAGTCACGATCATAAATAAT 1700017
Query 66683 AACCGAGTTGAGTTTATCCTTATATTTGTTAACTACAT--CCATGGTAATACTTGAAATA 66740
||| || | || || ||| | ||||||| |||||| | |||||
Sbjct 1700018 TGACGAATTCAAACGTTCTGCATTTTTCTGCACTACATTGTAATGGTATT--CGGAAATC 1700075
Query 66741 ATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTGAATAAATCCTCCATCACTTCA 66800
| || || || ||| | | ||| ||| | | | | ||| || || ||
Sbjct 1700076 AATGGCGATGGTCGCCCCGTCTCTTTATTAACAAAATGATACAGATCACTTATAACCTCT 1700135
Query 66801 CTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTATAATG 66860
|||| |||||| ||||||||||| | ||| || || || || | ||| || | |||
Sbjct 1700136 GAGAATACTTTTTTCGTTTCTTTGTGCAAATTGGAGACAGCAATGCGAGCTGCCAATATG 1700195
Query 66861 GCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAAT 66920
|||||||| ||| | |||||| | || ||||| | || || |||| | |||||| |
Sbjct 1700196 GCATAATCTCCATGATTTGTAGTTAATGTAGCTGCGGTCTCTGCCGCCAAATTGTCCAGT 1700255
Query 66921 TCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCATAGCTATTTTAATAGGA 66980
||| || || || ||| || | || | || ||||||| | || | |||
Sbjct 1700256 TCTTGTGTAGTAACACCACAGTAAAGGCCATTAATTACCTTCAGTGTAATGGCCACTGGA 1700315
Query 66981 TCTATATGATCAGTGTTTAAGCCATAACATAATTTTCTAATACGAGATGTGATTTTATCA 67040
|| | | ||| |||| ||||||||||||| ||| || || ||||| ||||||||
Sbjct 1700316 TCAACAAAATCCATGTTCAAGCCATAACATAGCTTTTGTATGCGTGATGTTATTTTATCG 1700375
Query 67041 AACATG-ACATTTTCCTTGTATCCATTTCGTTTAATGACAAACATTTT 67087
|| ||| || | ||||||| ||||| |||||||| ||||| | |||
Sbjct 1700376 AA-ATGTACCTCTTCCTTGCGTCCATCTCGTTTAAGAACAAATAATTT 1700422
>seq869
Length=1271022
Score = 304 bits (336), Expect = 2e-77
Identities = 506/724 (70%), Gaps = 9/724 (1%)
Strand=Plus/Minus
Query 35973 CCAATTCAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAAT 36032
||||||| | ||| | ||| || ||||||||||||||| ||| | || |||||
Sbjct 484158 CCAATTCCACCAGCAAACGATCGGCCACAAATTCTATATATTCCGACATTAATTTACAAT 484099
Query 36033 TCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCG 36092
|||| ||||| | || || || | ||| | ||||| ||||| |||||||| ||||
Sbjct 484098 TCATGCCTATCAAATTGACGGGCAAAGCATCTGTAAGGAATTCCTGTTCAATTTTCACCG 484039
Query 36093 CGTCTGTTATAATAGATATTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACA 36152
| || || ||||| || | | | ||| ||| || | | | |||||||||||||
Sbjct 484038 CTTCAGTGATAATTTCAATAATTCTCTCTCGACTGGGACGTTGTACCAAATGTTTAAACA 483979
Query 36153 TCAA-ACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAAC 36211
| || ||| || ||||| || |||| |||||| || | || || || ||||| ||
Sbjct 483978 TTAATACA-GCAAAATCACAATGTAAACCCTCATCACGTGATATCAACTCATTGGAGAAT 483920
Query 36212 GTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAA 36271
|| || || ||||| || ||||| || || |||||||| ||||| ||||| ||| |
Sbjct 483919 GTAAGACCAGGCATAAGACCACGTTTCTTTAGCCAAAAGATGGAAGCAAAACTGCCACTA 483860
Query 36272 AAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCAC-TGTC 36330
|||||||| || ||||| || ||||| ||||||| | || ||| || || | ||
Sbjct 483859 AAGAAAATACCCTCTACAGCAGCAAAAGCAATAATACGTTCACCAAAATTTGCTGATTTC 483800
Query 36331 --ATGTATCCA--CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTA 36386
| ||||| | ||| ||||||||||||| || ||| ||||| || || |
Sbjct 483799 GAAGAAATCCAAGCCATTG--CCCAATCGGCCTTACGCTTAACAGCTGGCATAGTTTCAA 483742
Query 36387 TAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGAC 36446
|||||||||||||||| | | | || ||| |||| ||| ||||||| | || ||
Sbjct 483741 TAGCATTAAAGAGATAATCACGCTGTTCACGATCCTTAATATAACTATCAATTAGAATAC 483682
Query 36447 TATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCT 36506
|||||||||| || || | ||||| ||||| |||||||| || |||||||| | ||||
Sbjct 483681 TATACATTTCAGAGTGTACATTTTCCATGGCAATTTGAAAGCCATAGAAACAGCGTGCCT 483622
Query 36507 CGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCAC 36566
| |||| ||||||||| | | || ||||| | | ||||||||| || || || ||
Sbjct 483621 CTGTAACTTGTACTTCTTGAGAGAAACGTTCGACAAGATTTTCATTGACAATGCCATCGG 483562
Query 36567 TGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTTTGGTGTTAGTTTAT 36626
|| || || || || | |||||| || |||| || || || ||| | |
Sbjct 483561 AAGCGGCGAAGAAAGCAAGAACATGTGAAATGAAATGACGCTCATTGTCGGTGAGTCTTT 483502
Query 36627 TCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTG 36686
||| || | |||||||||| | ||| |||||||| || |||||||| || || || |
Sbjct 483501 CCCAGTCGGAGTTATCTTTAGAAAGATCTACTTCTTCTACCGTCCAAAAAGAAGCTTCGG 483442
Query 36687 CCTT 36690
||||
Sbjct 483441 CCTT 483438
>seq1394
Length=309634
Score = 114 bits (126), Expect = 2e-20
Identities = 90/108 (83%), Gaps = 0/108 (0%)
Strand=Plus/Plus
Query 31215 AATACCTAATTCCTTGACCTGAGTTAATGATCTCCAATCCATATTAGCGCTTCCTAAATA 31274
|||||||||||| || ||||| ||||| |||||||| |||||||| || || || |||||
Sbjct 287882 AATACCTAATTCTTTAACCTGCGTTAAAGATCTCCAGTCCATATTGGCACTGCCCAAATA 287941
Query 31275 AATATGTGTATTATCAGATATCCAAAATTTTGTATGAAGAACTCCTCC 31322
||||||| | || ||||| ||||| ||||||||||| | ||| || ||
Sbjct 287942 AATATGTTTTTTGTCAGAAATCCAGAATTTTGTATGTAAAACACCACC 287989
>seq583
Length=2816
Score = 107 bits (118), Expect = 3e-18
Identities = 312/474 (66%), Gaps = 6/474 (1%)
Strand=Plus/Minus
Query 35842 GTCTTCTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATT 35901
||| | || || |||||| || || ||||| |||| ||||| || || || || ||
Sbjct 641 GTCCTGTTTAGCCATAACACCGGCCTTCTGGTAGTCACTAACACGCTTCTCAAAGAAGTT 582
Query 35902 AGTTTTACCTTCTAATGATATATTTTCCATGAAATCGAATGGATTGATAACATTATAAAt 35961
||| ||||| | || || ||||| |||||||||||||| |||||| ||| || |||||
Sbjct 581 AGTCTTACCAGCCAAAGAGATATTCTCCATGAAATCGAAGGGATTGGCAACCTTGTAAAT 522
Query 35962 ttttttAAATCCCAATTCAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCAT 36021
|| | | ||||| || || || | || || || | || | || |||||
Sbjct 521 CTTCTCATGGCCCAAGGCAACCATTAAACGGTCAGCTACGTACTCAACGTACTGATTCAT 462
Query 36022 CATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACA-GTAAGAAATTCTTGTT 36080
|| ||| |||||| || | | | ||| || | ||| || | ||| | |||||||
Sbjct 461 CAAATCAGCATTCATACCAAGCAAGTGAACAGGCAAAGCATCACGGAAG-TACTCTTGTT 403
Query 36081 CAATAGAGACCGCGTCTGTTATAATA-GAT-ATTACTGTTTCTTCACTCGGTGGATACAA 36138
||||| || || || || |||||| | | | || | || ||| || | | |
Sbjct 402 CAATATCAACAGCCTCGGTCATAATACGCTCAATA--ATCTCACGACTGGGACGGTTCTC 345
Query 36139 TAAATGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAA 36198
||| || || | | ||| |||||||| ||| | |||||| ||||| ||| |
Sbjct 344 TAAGTGAGAGAAGAGAAGACAAGCGAAATCAGTGTGCATACCCTCATCTCTGGAAATAAG 285
Query 36199 TTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGC 36258
|| || || || | || ||||| | ||||||||| || | ||| || |||| ||
Sbjct 284 CTCATTACTGAATGTTAAACCAGGCATCAAGCCACGCTTCTTCAACCAGAAAATGGCAGC 225
Query 36259 AAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTC 36312
||||| ||| ||||| | || || || || || || || | | ||||||
Sbjct 224 GAATGAACCACTGAAGAAGACACCCTCGACAGCAGCGAAAGCGACTAATCTCTC 171
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658158706874920
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