Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= NC_003444.1 Length=37074 Score E Sequences producing significant alignments: (Bits) Value seq1596 1090 0.0 >seq1596 Length=248270 Score = 1090 bits (1208), Expect = 0.0 Identities = 2062/3004 (69%), Gaps = 46/3004 (2%) Strand=Plus/Minus Query 2502 TGATGCCGTTGATACTGATGGGCTGTTCCGGGCAGACGTTTATGTCAGTCCTGAGACTGC 2561 |||| | ||||||| ||||| | ||| || || || | || || ||||| || | Sbjct 96729 TGATTCTATTGATACAGATGGAATTTTCACTGCTGATGTGCACGTTAGCCCTGAAACGTC 96670 Query 2562 GATGAAACTGGCTGCGGTGTATTCCTGTATCTATGTCCTGTCTTCCAGCCTTGCCCAGAT 2621 ||||| || || || || ||| | || || || | || ||||| | || || || Sbjct 96669 AATGAAGCTTGCGGCAGTATATGCGTGCATTTACATACTTTCTTCGTCTATAGCTCAAAT 96610 Query 2622 GCCGTTGCATGTTATGCGCAGGCACAAGGGGAAGGTTGAACCCGCACGCGATCATCCGGC 2681 |||| | ||||||||||| | | || |||||| | || || |||||||| Sbjct 96609 GCCGCTACATGTTATGCGTAAATCCGGCAATAAAGTTGAAACAGCGCGTGATCATCCTTT 96550 Query 2682 GTTTTATCTGGTTCATGATGAGCCCAATACCTGGCAAACCAGCTACAAATGGCGCGAACT 2741 ||| | || ||||||||||| || || |||||||| || || |||||||| ||| Sbjct 96549 ATTTCACCTCGTTCATGATGAACCTAACGAATGGCAAACTAGTTATAAATGGCGAGAAAC 96490 Query 2742 GAAACAACGTCACATCCTTGGCTGGGGGAATGGGTATACCTGGGTGAAACGTAATCGTCG 2801 |||||| || || | ||||| ||||| ||||| || || ||| || || ||| Sbjct 96489 GAAACATCGGCATGTGCTTGGTTGGGGAAATGGCTACACACAGGTTGTGCGAAACCGTAA 96430 Query 2802 CGGTGAAGTCATATCCCTGGATTGCTGTATGCCGTGGGAAACGACGCTGATGAATACTGG 2861 || ||||| | || || ||||||||||||||||| || || ||||||| || Sbjct 96429 AGGGGAAGTGACCAATCTTGAGGCGTGTATGCCGTGGGAAACAACCCTACTGAATACAGG 96370 Query 2862 TGGCCGATATACCTACGGTTTGTACAACGAATATGGGGCGTTTGCGATCAGTCCGGACGA 2921 ||||| |||||||||||| | ||||||||| || ||||| |||||||| || || Sbjct 96369 CGGCCGTTATACCTACGGTGTTTACAACGAACTCGGCAATTTTGCCATCAGTCCTGATGA 96310 Query 2922 TATGATCCACATCCGTGCGCTGGGTAATAATCAGAAGATGGGGCTGAGTCCGATTATGCA 2981 ||||||||||| || || ||||| ||||| ||| ||||| | ||||| ||| | || Sbjct 96309 CATGATCCACATTCGCGCTCTGGGGAATAACCAGCGCATGGGTATTAGTCCTATTGTTCA 96250 Query 2982 ACATGCCGAAACAATAGGCATGGGGATGAGCGGTCAGAAGTACACAGAAAGC-TTCTTCA 3040 ||||| ||||| || || ||||| |||||||| |||||||| || || | || ||| Sbjct 96249 GCATGCTGAAACTATCGGTATGGGAATGAGCGGACAGAAGTATAC-GAGTTCATTTTTCG 96191 Query 3041 GCGGTAATGCCCGTCCGGCGGGGATAGTATCCGTTAAAAGCGGACTCAATAAG-GAAAGC 3099 |||| ||||| | ||||| || || || || |||||| | ||| | || || ||| || Sbjct 96190 GCGGGAATGCAAGACCGGCTGGTATTGTTTCTGTTAAAGG-GGAGTTAAAAACAGAAGGC 96132 Query 3100 TGGGGCTGGCTTAAAGATCAGTGGCAGAAGGCATCGCAGGCGTTACGCCGCCAGGAAAAC 3159 ||| |||| || || |||||| || |||||| || ||||| | |||||||| Sbjct 96131 TGGACTAGGCTAAAGGAAATGTGGCAAAAAGCATCGGCAGCATTACGTAGTCAGGAAAAT 96072 Query 3160 AAAACCATGCTGCTGCCAGCCGATCTGGATTACAAGGCACTGACTGTGTCGCCAGTTGAC 3219 ||||| ||||| | || || || || ||||| |||||||| || || || || || ||| Sbjct 96071 AAAACAATGCTATTACCCGCTGAGCTTGATTATAAGGCACTAACAGTTTCCCCTGTCGAC 96012 Query 3220 GCTCAGATCATTGACATGATGAAGCTGAACCGTTCAATGATCGCCGGTATTTTCAATATT 3279 |||||| | ||||||||| |||| |||||||||||||||| || || || || || || Sbjct 96011 GCTCAGTTAATTGACATGCTGAAATTGAACCGTTCAATGATTGCGGGGATCTTTAACGTT 95952 Query 3280 CCTGCGCACATGATTAATGACCTCGAAAAAGCCACCTTCTCCAATATTTCTGCGCAGGCG 3339 ||||| ||||||||||||||||||||||||||||| || || |||||||| | ||| || Sbjct 95951 CCTGCCCACATGATTAATGACCTCGAAAAAGCCACTTTTTCTAATATTTCAGAGCAAGCT 95892 Query 3340 ATTCAGTTTGTCCGCTACACGATGATGCCGTGGGTGACGAACTGGGAGCAGGAGCTTAAC 3399 ||||||||||| || | | || ||||| ||| | ||| ||||| ||||| | ||| Sbjct 95891 ATTCAGTTTGTTCGGCATTCAATCATGCCTTGGACGGTGAATTGGGAACAGGAATTAAAC 95832 Query 3400 CGTCGCTTGTTTACCCGCGCTGAGTTAGCCGCCGGGTATTACGTCAGGTTCAATCTGACG 3459 || || || ||||| || || | || || | ||| || | || ||||| || Sbjct 95831 CGACGTTTATTTACGCGACAAGAACGAAAGGCGGGATTTTATGTTCGCTTTAATCTTGCG 95772 Query 3460 GGGCTTTTACGCGGAACTCCGCAGGAGCGCGCGCAATTCTATCACTTCGCTATTACCGAT 3519 || | || ||||| || || || | || || | || ||||| | || || ||||| Sbjct 95771 GGTTTATTGCGCGGTACCGCGAAGCAACGTGCTGAGTTTTATCATTACGGCATCTCCGAT 95712 Query 3520 GGATGGATGAGCCGTAATGAGGCCCGCGCATTCGAGGATATGAATCCGGTTGAAGGGCTG 3579 ||||||||||| || ||||| | || || || || |||||||| || ||||| |||||| Sbjct 95711 GGATGGATGAGTCGAAATGAAGTGCGTGCTTTTGAAGATATGAACCCAGTTGATGGGCTG 95652 Query 3580 GACGAGATGCTGGTAAGCGTGAATGCTGCTAACCCGGCAGGAGATTTTAAGCCCCCAAAA 3639 ||||| ||| | || ||||| ||||||||| | || | || | | || | | | Sbjct 95651 GACGAAATGTTAGTCAGCGTTAATGCTGCTCAGCCTGTTGG-TAGTCAAA----CAGATA 95597 Query 3640 AACGATGAGGGAAAAACCA--ATGAATGACCGTGAAATCCGTTGTTACAGCGGTGAGGTG 3697 ||| |||| | || | | | | | | |||| || || || | || || ||| Sbjct 95596 AACCCAAAGGGGATAATGATGAGCAGTAATCAAGAAACTCGCTGCTATATGGGAGAAGTG 95537 Query 3698 CGTGCTGAGAGGCATGACGATAACCCGG---CGCACATTATCGGTTATGGATCGGTGTTT 3754 | || || || || || | || | || |||||||| || || || || Sbjct 95536 AGGGCCGAACCCGGAGAAGAGAATCAGGCAACCCATATTATCGGGCTGGGCTCTGTTTTC 95477 Query 3755 GACTGTCGTTCTGAGCTGATATTCGGTTCATTCCGCGAAATCATCCGGCCCGGCGCTTTT 3814 |||| |||||||||| |||| | || ||| ||||| || ||| || || ||| Sbjct 95476 GACTCTCGTTCTGAGTTGATGTATGG---ATTTAAAGAAATTATTAAGCCGGGGGCATTT 95420 Query 3815 GACGATGTGCTTGGTGATGATGTACGCGCACTGTTTAACCACGATCCTAATTTTATTCTT 3874 || || |||||| ||||||||| |||| | | || ||||| |||||||| | |||||| Sbjct 95419 GATGACGTGCTTAATGATGATGTTCGCGGATTATTCAACCATGATCCTAACTATATTCTC 95360 Query 3875 GGGCGTAGTGCAGCAGGCACGCTGAATCTCTCAGT-TG-ATGAGCGCGGATTACGCTATG 3932 || | | | || || |||||| ||| | ||| || ||||||| || || |||| Sbjct 95359 GGAAGAACATCGGCGGGAACGCTG--TCTTTAAGTGTGAATGAGCGAGGTTTGGTTTATG 95302 Query 3933 ACATCCAGGCTCCGGAGACACAGACCATTCGTGATCTGGTGCTGGCCCCGATGCAACGTG 3992 ||||| || ||||| || || || ||||| ||| | ||||| || |||||||| |||| Sbjct 95301 ACATCACTGCACCGGATACCCAAACTATTCGCGATTTAGTGCTAGCACCGATGCAGCGTG 95242 Query 3993 GAGATATTAACCAGTCATCTTTCGCTTTCCGTGTCGCCCGTGACGGTGAGGAGTGGTATC 4052 | ||||||||||| ||||| || || ||||||||||| |||||||| || ||||||| Sbjct 95241 GCGATATTAACCAAAGTTCTTTTGCCTTTCGTGTCGCCCGAGACGGTGAAGATTGGTATC 95182 Query 4053 AGGATGAGGACGGGGTTGTTATTCGCGAGATAACCCGCTTTTCCCGTCTGCTGGATGTCA 4112 | ||||| || || || ||||||| || || || || || | | ||||| | Sbjct 95181 AAGATGATGAAGGCGTGATTATTCGTGAAATTCATAAATTCTCTCGCTTATTTGATGTGA 95122 Query 4113 GTCCTGTGACATATCCTGCCTATCAGGAGGCTGACTCGGCTGTTCGCTCCATGAAAGCAT 4172 | || ||||| || || |||||||| || || | | || |||||||| ||| |||| | Sbjct 95121 GCCCAGTGACCTACCCAGCCTATCAAGACGCCGGTGCCGCAGTTCGCTCGATGGAAGCTT 95062 Query 4173 GGCAGGAGGCGCGCAACAGCGGCGCGCTACAGAAAGCCATTAATCAACGTATGGCGCGTG 4232 || |||| || | ||| |||| | || || ||||| ||||||||| | ||||||| Sbjct 95061 GGAAGGAAGCCAGAAACGGCGGTGATCTGCAAAAAGCGATTAATCAAAAATTAGCGCGTG 95002 Query 4233 AACGCGTCCTGACCCTTCTTAACGCGTAAAGGAA-AC----ATCATGAAACTGCATGAAC 4287 | ||| | | || | || || || ||| | || || | ||||| || |||||| Sbjct 95001 AGCGCATTTTAACTTTACTCAATGCATAAGGTAATACTATGACTATGAAGCTTCATGAAT 94942 Query 4288 TGAAACAGAAACGTAATACTATCGCAACTGACATGCGCGCCCTGAATGAAAAAATTGGTG 4347 | |||||||||||||| || ||||| ||||||||||| | | |||||| | |||| Sbjct 94941 TAAAACAGAAACGTAACACCATCGCTGTCGACATGCGCGCTATTCACGAAAAAGTGGGTG 94882 Query 4348 ATAACGCATG--GACGGAAGAGCAGCGCACGGAGTGGAACAAAGCAAAATCCGAACTGGA 4405 || | || |||||| || ||||| || |||||||| ||||| ||| | || || || Sbjct 94881 --AAGGTGTGATGACGGATGAACAGCGTACCGAGTGGAATAAAGCGAAAACAGAGCTTGA 94824 Query 4406 AGCGCTTGATGAACGAATTGCACGCGAAGAAGAACTGCG-TCGTCAGGATCAGGCGTACA 4464 | | || | | |||| ||| ||||| | || || || | | || |||| || Sbjct 94823 AAACTTGGAGGCTCAGATTGAACGTGAAGAGCAGCTTCGCTCATTA-GACCAGGAGTTTG 94765 Query 4465 TTGAAAGCAATGAGGAAGAGCAGCGTCAGAATCTTGATCCGGA-AAACAATTCGCAACAG 4523 |||| || ||| |||||||||||| |||| ||| || || ||||| | Sbjct 94764 TTGACGATAAAGAGCAAGAGCAGCGTCGTAATCCTGAAAATGACCCTGAAGCCGCAA-AA 94706 Query 4524 GATGAGAAACGAGCTCAGGTTTTTGATAAGTGGATGCGTCACGGTGCCAGTGAGCTGACA 4583 | ||| || | | |||||| | ||||| ||| | ||||| | || Sbjct 94705 GTCGAGCGTCGTAATTTAGCCTTTGATCGCTTTGTGCGTAGCGGGTTCGGTGAGTTATCA 94646 Query 4584 TCAGAAGAGCGAAAGGCGTTGCGTGAACTTCGTGCCCAGGGTGTAGCTCAGGATGAAAAG 4643 | |||||||| | || | ||| | ||||| ||||| | | ||||||||| Sbjct 94645 ACTGAAGAGCGTCAAGCACTTAAGGAATTACGTGCGCAGGGAACGTCGCCGGATGAAAAA 94586 Query 4644 GGCGGATATACCGTACCAGAAAC-ATTCCTGGCGAAAGTTGTTGAGAAGATGAAATCCTA 4702 ||||| ||||||||||| || || | | ||| ||| || ||||| ||||||| | || Sbjct 94585 GGCGGGTATACCGTACC-GACACAAATGCTGAATAAAATTATTGAGCAGATGAAGGCATA 94527 Query 4703 CGGTGGCATCGCCAGTGTGGCGCAGATTCTGACCACTTCTGACGGTCGCACCATGGAGTG 4762 |||||||| ||||| || || || ||| | || || || || | || ||| Sbjct 94526 TGGTGGCATTGCCAGCGTCGCACAAATTTTAACGACATCAACAGGACAAGATATTACGTG 94467 Query 4763 GGCAACAGCTGATGGTACTTCCGAAGTTGGTGTTCTGCTGGGCGAAAATGAAGAAGCCGG 4822 | | || | |||||||| |||| || | | | ||||||||| || || | Sbjct 94466 GTCCACTTCGGATGGTACCGAGGAAGAAGGGGAATTATTAGGCGAAAATACAGCGGCTAG 94407 Query 4823 TGAAGAAGACACCGATTTCGGTATGGGAAGTCTT-GGGGCGCTCAAAATGACATCGAAAA 4881 ||| |||| || || |||| | || |||| || ||| || | | || |||| Sbjct 94406 CGAACAAGATGTAGAATTTGGTACTGCAA-TCTTAGGTGCGAAAAAGCTTTCCTCTAAAA 94348 Query 4882 TCATTCGTGTGTCTAATGAGTTGCTGCAGGACAGCGCGATCGATATGGAAGCTTATCTTG 4941 | ||||| || ||||| || ||||| || ||||||| | |||| ||||| ||| | | Sbjct 94347 TTATTCGCGTATCTAACGAATTGCTTCAAGACAGCGGTGTGAATATTGAAGCCTATTTGG 94288 Query 4942 CCCGTCGCATTGCTGAACGTATTGGTCGTGGTGAAGCCCGTTATCTGATTCAGGGGACGG 5001 | ||||||||| | || |||||||| || || || ||| | || | || || | Sbjct 94287 GTAGCCGCATTGCTCAGCGAATTGGTCGCGGGGAGGCGAAGTATTTAGTTAAAGGTACAG 94228 Query 5002 GTGCTGGTACGCCTAAACAACCCAAAGGGCTGGCAGCATCAGTGACCGGCACAACACAGA 5061 | | || |||| |||||| ||||| ||| || || || || || || | Sbjct 94227 GGACAGGCTCGCCGCTACAACCGAAAGGTTTGGATGCTTCCGTCACTGGTAC------GG 94174 Query 5062 CTGCCGCGGCAAATGCGGTGAAGTGGCAGGAAATTCTGGCTCTGAAACACAGCATT-GAT 5120 || | | || || | |||| | || ||| || | |||| ||||| || Sbjct 94173 TTGATGTGTCAGCAACGTTTGGGTGGAAAGACATTAACGCATTAGAACA-TGCATTAGAC 94115 Query 5121 CCTGCATATCGTCGCGGACCGAAATTCCGCCTGGCGTTTAACGATAATACGCTGAAACTG 5180 ||||| || || ||| || || ||||| | ||||| |||||| | || | ||| Sbjct 94114 CCTGCCTACCGAAACGGGCCTAAGTTCCGTTTAGCGTTCAACGATGACACATTAAAAAAC 94055 Query 5181 ATCAGTGAGATGGAAGACGGTCAGGGACGCCCTTTATGGTTGCCGGATATTGTTGGTGTG 5240 | | |||||||| || | || || || | |||||||| |||| |||||| Sbjct 94054 CTAAAAGAGATGGAGGATGCACAAAAGCGTCCACTGTGGTTGCCATCGATTGCTGGTGTT 93995 Query 5241 GCACCTGCTTCAGTGTTGAATGTACCGTATGTCATTGATCAGGAAATTGATGATATCGGG 5300 || ||| | | | || | | | ||||| ||||||||| |||||| | || | Sbjct 93994 GCTCCTTCGACTATCTTAGGTATGCAATATGTGGTTGATCAGGCCATTGATAAAATGGAA 93935 Query 5301 GCGGGTAAAAAATTCATGTTCTGTGGTGACTTTGATCGCTTCATTATCCGTCGTGTGCGA 5360 ||||||||||||||||| ||||| ||||||||||| || |||||| | ||||||||| Sbjct 93934 GCGGGTAAAAAATTCATCTTCTGCGGTGACTTTGACCGATTCATTTTGCGTCGTGTGACC 93875 Query 5361 TACATGATTCTTAAACGTCTGGTTGAGCGTTACGCGGAATATGATCAGACCGGTTTTCTG 5420 ||||||| ||| ||||| | ||||||||||| || || ||||| ||||| | || || Sbjct 93874 TACATGACTCTGAAACGCTTAGTTGAGCGTTATGCAGAGTATGACCAGACAGCATTCTTG 93815 Query 5421 GCCTTCCATCGTTTTGACTGTATCCTGGAAGACACCTCTGCCATTAAAGCGCTGGTGGGG 5480 || ||||| || || || ||| |||| ||||| || || || ||||| |||||||| || Sbjct 93814 GCGTTCCACCGCTTCGATTGTGTCCTTGAAGATACTTCAGCGATTAAGGCGCTGGTCGGT 93755 Query 5481 AAAG 5484 |||| Sbjct 93754 AAAG 93751 Score = 131 bits (144), Expect = 4e-26 Identities = 336/501 (67%), Gaps = 18/501 (4%) Strand=Plus/Minus Query 29663 CCCATGAACTGAAGGAAGTGGGTGATCAGTGGCGCACGCCGGACAACATTTTCT-GGGGA 29721 ||||||||||||| ||| | |||||||| ||| |||| || | | || | | ||||| Sbjct 107788 CCCATGAACTGAAAGAAATTGGTGATCAATGGTGCACACCA-AGTGCTTTGTATTGGGGA 107730 Query 29722 ATTAACACCCTGTTTGGCCCGTTTGTTCTGGATCTGTTCACTGACGGTGATAACGCCAAA 29781 |||| | | | | || || |||||| |||| |||||||| | || || Sbjct 107729 ATTAGCTCAATATACGGGATTTTCAAACTGGATTTGTTTACTGACGGAAAAAATAGTAAG 107670 Query 29782 TGTGCCGCGTATTAC---ACGGCGGAAGACAACGCGCTGGCGCATGACTGGTC-AGAACG 29837 || | |||| | || || || || || || ||| |||| |||||||| | | | Sbjct 107669 ---GCTCCTTATTTCTATACTGCAGAGGATAATGCACTGACGCAGGACTGGTCCACTAAG 107613 Query 29838 CCTTGCGGAGCTTAAAGGTGCTGCCTTTGGTAATCCTCCATACAGCCGCGCCAGTCAGCA 29897 | | || ||| || || ||||| ||||| ||||| ||||| ||| ||| | Sbjct 107612 C-TGGCAGAGGTTGGCGGCGCTGCTTTTGGAAATCCGCCATATTCCCGT---AGTTCCTA 107557 Query 29898 TGAGGGGCAATA---CATCACCGGCATGCGTTACATCATGAAACATGCCAGTGCCATGCG 29954 | | | || | |||||| ||| | || |||| ||||| ||||| | ||||| Sbjct 107556 TCACGAAAAACAGCCCATCACTGGCGTTGGTCACATTATGAATCATGCAATGAAGATGCG 107497 Query 29955 TGATAAGGGCGGGCGCTATGTTTTCCTGATCAAAGCTGCCACCAGCGAAGTGTGGTGGCC 30014 || || || || |||||||| || | | |||||||| || |||||| |||||||| Sbjct 107496 AGAGAAAGGTGGTCGCTATGTGTTTTTACTAAAAGCTGCAACTAGCGAAACATGGTGGCC 107437 Query 30015 GGAAGATGCAGATCATATTGCTTTTATTCGCGGGCGTATTGGTTTTGAACTGCCTGTCTG 30074 || |||| |||||| || |||||||| || ||||||||||| || | || | || Sbjct 107436 TGAGCATGCTGATCATGTTTGCTTTATTCGTGGTCGTATTGGTTTCGATGTCCCCCTATG 107377 Query 30075 GTTTATCCC-GAAAGACGAGAAGCAGGTACCGACAGGAGCTTTTTTCGCTGGTGCTATTG 30133 ||||| ||| | || ||| || ||| || | || || || || || ||||| || | Sbjct 107376 GTTTAACCCAGTTAG-CGATAAACAGAAGCCAAGCGGTGCATTCTTTGCCGGTGCAATAG 107318 Query 30134 CTGTTTTTGACAAGACCTGGA 30154 ||||| || || || |||| Sbjct 107317 TCGTTTTCGATAAAACATGGA 107297 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 118512789178616