Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq869 87.8 1e-12 >seq869 Length=1271022 Score = 87.8 bits (96), Expect = 1e-12 Identities = 360/553 (65%), Gaps = 26/553 (5%) Strand=Plus/Plus Query 22354 AAGGCCGTTGCGTCTTTTTGGACCGTTGAGGAGGTGGATCTTAGTACTGATGTACGCC-A 22412 ||||||| || ||||||||||| || || || || |||||| || ||| || || | Sbjct 483438 AAGGCCGAAGCTTCTTTTTGGACGGTAGAAGAAGTAGATCTTTCTAAAGATA-ACTCCGA 483496 Query 22413 TTGGACAGAAAAACTGACCGAGGCTGAGCGCAGGTTCATGTCTCACATACTGGCATTCTT 22472 ||| |||| ||| ||||| |||||| ||||| || || | || || ||||| Sbjct 483497 CTGG---GAAAGACTCACCGACAATGAGCGTCATTTCATTTCACATGTTCTTGCTTTCTT 483553 Query 22473 TGCAATGGCAGATGGCATTGTAGGCGACAACCTTGTGTGCAATTTCGCAAAAGAACTTGA 22532 || | ||||||||||| || || ||||| |||| | ||||| | | Sbjct 483554 CGCCGCTTCCGATGGCATTGTCAATGAAAATCTTGTCGAACGTTTCTCTCAAGAAGT--A 483611 Query 22533 CTATATTCCAGAAGCCAGAGCTTTCTATGGGTTTCAGGTGGCAATGGAAAATATACATGC 22592 | | || |||| || | ||||||||| ||||| | || ||||||||| |||| | Sbjct 483612 CAAG-TTACAGAGGCACGCTGTTTCTATGGCTTTCAAATTGCCATGGAAAATGTACACTC 483670 Query 22593 TGAAATGTATACTCAGCTGATT-ATCACATTAGTAGCTAAAGAGAATCAAGCCGCATTGT 22651 ||||||||||| | || ||| || || || | | ||| ||| ||| | Sbjct 483671 TGAAATGTATAGTATTCTAATTGATAGTTATATTAAGGATCGTGAA--CAGCGTGATTAT 483728 Query 22652 ---TTTCA-GCAGCTGAAGATATGCCATGTGTTAAAGCCAAGGCACAGTGGGCTGCACAA 22707 ||| | || |||| ||||||| |||||| ||||| | |||| ||| Sbjct 483729 CTCTTTAATGCTATTGAAACTATGCCAGCTGTTAAGCGTAAGGCCGATTGGG-----CAA 483783 Query 22708 TGGCT--GAATGCCAC-ACATAAG--TCTATCGCAACACGTCTCTTGGCCTTTGCGGCTG 22762 ||||| || | | | | || || | | | |||| | | || ||||| |||| Sbjct 483784 TGGCTTGGATTTCTTCGAAATCAGCAAATTTTGGTGAACGTATTATTGCTTTTGCTGCTG 483843 Query 22763 TTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGCTGAAGAAACGTTCGC 22822 | || || | | ||| ||| ||||| |||| || ||||| ||||||||| | Sbjct 483844 TAGAGGGTATTTTCTTTAGTGGCAGTTTTGCTTCCATCTTTTGGCTAAAGAAACGTGGTC 483903 Query 22823 TCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACGAAGGTCTACACTGTG 22882 | ||||| || | | || ||||| |||||||| ||||| || ||| |||| |||| Sbjct 483904 TTATGCCTGGTCTTACATTCTCCAATGAGTTGATATCACGTGATGAGGGTTTACATTGTG 483963 Query 22883 ACTTTGCTTGTAT 22895 | ||||| ||||| Sbjct 483964 ATTTTGC-TGTAT 483975 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356226162844339