Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28]
1,713 sequences; 434,128,924 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq1348 574 6e-159
seq869 284 2e-71
seq583 122 1e-22
seq1394 100 4e-16
>seq1348
Length=1847788
Score = 574 bits (636), Expect = 6e-159
Identities = 1489/2261 (66%), Gaps = 18/2261 (1%)
Strand=Plus/Plus
Query 70801 GTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACATGCCTGTTTTTAGA 70860
||||| ||||| | | || || | ||| || | | ||| |||||||| || ||||
Sbjct 1698168 GTAAATTGAATAGCATTGGCGGCTGGTTTTGTTCTCAAATAATACATGCCGGTCTTTAAG 1698227
Query 70861 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAGCTAGGATCGGCTATG 70920
|| |||| | || ||||| || || | |||| || | || ||||| |
Sbjct 1698228 CCTGATTTCCAGGCATAGAAATGTATGGAGGTCAATTTGCCGTAATTTGGCTCGGCCACA 1698287
Query 70921 TGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 70980
|| ||||| | ||| ||||||||||| ||||| || || | ||| |||||||||| ||||
Sbjct 1698288 TGTATATTGAACGATTGACTTTGATCTATGAAAGCGCCACGGTCGGCAGCCATTTGTATG 1698347
Query 70981 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAAC-TCGCTTAATATCTTCTGGAAG 71039
| ||||| | ||| ||||||| ||||| || | || | || ||| || || |
Sbjct 1698348 GTGGTCTTAACGGAAATCTCCCAAACTGTTTTGTATAGATCACGTA-TATGTTTGGGTAT 1698406
Query 71040 GT-TTGTATTC--TGAATGGATCCACCATCTGCAATAATCCTATTTTTGATCTCTTCATT 71096
| || ||| || ||||| || | || | |||||| ||||||| || || ||||
Sbjct 1698407 TTCTTCTATGGCTTGTATGGAGCCGCGATTGGAAATAATTTTATTTTTCATTTCATCATC 1698466
Query 71097 CCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACTACTTGAAATTCTCC 71156
|||||| | ||||||||| || |||| | |||| |||| || || | ||||||||
Sbjct 1698467 CCATAAATCAAGTTCGGTTAAATCTTTAAGCAAATGATGATTGACAACATTGAATTCTCC 1698526
Query 71157 AGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACTGACTCATTATTTCC 71216
||||| || | | ||||||||||||| ||| |||||||| | || ||||| || ||
Sbjct 1698527 CGACAAAACACGTCTAGTGTAAATATTAGAGGTGTACGGTTCAAAGGATTCATTGTTGCC 1698586
Query 71217 CAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGACTATTTCTAAGACC 71276
| |||||| || || || || || ||||| || || | | | | ||| | | |||
Sbjct 1698587 TAGAATTTGTGCGGTCGAAGCTGTGGGCATTGGGGCTAATAGCAAAGAATTGCGTACACC 1698646
Query 71277 ATGTGATCGGATTTTATCTTTTAGAGATTCCCAATTCCAAAGATCCGATGGTACAACNNN 71336
|||| | |||||| || || | | ||| ||||| | || | |||
Sbjct 1698647 ATGTTGACTGATTTTCTCCTTCAACTCTGACCAGTTCCACAAGTCTGTGGGTGTTTTATT 1698706
Query 71337 NNNNNNNNNNNNNNNNNNNATGCCGTTACTAGCGTATGATCCTGCATATGTATCGTATGG 71396
|| || ||||| | | || | ||| || || ||||
Sbjct 1698707 CCACATATCATATTGTAGTATACCCTTACTTACTGGACAGCCGGGATAAGTTTCATATGT 1698766
Query 71397 TCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAATGCTCCATAATAAATGGTTTCGAA 71456
|| ||||||||||| | ||||||||| || || || || ||||||||||| ||||||||
Sbjct 1698767 GCCATCTTTTTCGGCCAATTCACAACTAGCTTCCAAAGCGCCATAATAAATAGTTTCGAA 1698826
Query 71457 AATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCAAATGGATAATTTAAGAGAATAAA 71516
||||| | ||| | ||| | || ||| | || ||| | | ||| ||
Sbjct 1698827 AATCTGTTGATTTAACAAAAATGCCTTTTCACTCTCATAGGGGTAACGCATTAAAATCAA 1698886
Query 71517 CGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCTGTGTCTCTTATTAGAAATTTC 71576
| || || || || ||||| || ||||| ||||| | || | | ||| || ||
Sbjct 1698887 AGTATCGGCAAAACCCTGAACACCTATACCAATAGGACGATGACGCAAATTGGACTTTCT 1698946
Query 71577 AGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACTATTAC 71636
|||||| || | |||||| | || || || || ||||| |||||||| || || ||
Sbjct 1698947 AGCTTCGGGCAACGGATAAAAGTTGATGTCGATGATTTTGTTGAGATTCTTGGTAATAAC 1699006
Query 71637 TTTGACCACATCCTTTAGTTTGAGAAAATCAAATCTCCCATCT---ATTACAAACACGTT 71693
||| |||| || | ||| |||||||| || ||| | ||||||| ||
Sbjct 1699007 TTTTGTAACATTTTTCAATTTTTTGAAATCAAAGGTCTTTTCTGGCGTGACAAACATATT 1699066
Query 71694 CAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCGGCATATTGTATAAT 71753
| ||||| || |||| ||||||||| |||| ||||| || | | ||||| || |||
Sbjct 1699067 AAGGGCAATGGAGGCCAAATTACAAACAGCTATCTCATCAGGGGCAGAATATTCTACAAT 1699126
Query 71754 TTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTT 71813
|| ||||| | || || ||||| ||||| || | ||||| || || || || |||
Sbjct 1699127 CTCTGTGCATAAGTTGCTGCACTTAATGGTGCCAATGTTTTGCTGGTTGCTTTTGCGGTT 1699186
Query 71814 ACACGCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGC 71873
|| ||||| || || | ||| | || ||||| ||||||| |||| ||| || || ||
Sbjct 1699187 GCAAGCATCTTTGTACAACATATAGGGTGTACCGGTTTCAACTTGAGCTTCAATTATAGC 1699246
Query 71874 TTTCCAGACGACTCGAGCCTTTATTATATTCTTGTATCTCTTTTCTCTTTCGTATTGTGT 71933
||| | | |||| || | | ||| | | |||| |||| || | ||
Sbjct 1699247 AAACCAAAGAGCCTGAGCTTTGACGGTGCGATTGGCTTTTCCTTCTTTTTCATACTTGGT 1699306
Query 71934 ATATAATCGTTCGAACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGACA 71993
||| ||| ||||||||| || |||||| ||| | | || ||||||| | |||||
Sbjct 1699307 ATACAATTCTTCGAACTCCTCACCCCAAACATCCTGCAGACCGGGACATTTGTGTGGACA 1699366
Query 71994 CATCAATGACCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAG 72053
||| | ||||| || |||| || | || ||||||||||| | || || ||||| ||
Sbjct 1699367 CATTAGGGACCAGTCACCATTTTCTTCCACACGTTTCATAAACAAGTCGGGTATCCACAG 1699426
Query 72054 AGCTATA-AATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGA 72112
||| ||| || |||||||||| ||||||||| || || || ||||| || || | ||| |
Sbjct 1699427 AGC-ATAGAAAAGATCTCTGGCTCTATGCTCTTCCTTGCCGGTATTTTTCTTTAAATCCA 1699485
Query 72113 GGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTT 72172
|| | | |||||| |||||||| || ||||| || || || | | || || ||||
Sbjct 1699486 AAAATTCAAAAATATCTGAATGCCAAGGCTCCAAATAAATAGCAAAGGCACCAGGGCGTT 1699545
Query 72173 TGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAA 72232
|| || |||||||| | || | || || ||| | || || | |||||| | |
Sbjct 1699546 TGCCACCACCCTGATCAACATAGCGGGCTACATTGTTAAACACCCTGAGCATTGGTACCA 1699605
Query 72233 TACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT--ATTGCT 72290
|||||| || | || || || ||| || | | || |||| | || | || |
Sbjct 1699606 GACCATTTGAGGTGCCGTTTGTGCCGTCAATGGAAGTGCCCTTGGCCCTTATGCAGTG-T 1699664
Query 72291 AATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATC 72350
| | || || || || || ||| ||| || || | || ||| ||| | | |
Sbjct 1699665 ACGT-TTATGCCAATACCACCCGCCGATTTGGATATCATGGCACATTGTTCCACTGACTT 1699723
Query 72351 ATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTG 72410
| || ||||| ||| ||| ||| |||| | | || ||||| |||| || |
Sbjct 1699724 GAAAATACCCTCAATAGAATCGGCCACCATGGTCAATAAGAAACACGACGACAACTGCGG 1699783
Query 72411 ACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAG 72470
| | | || | || || || ||||| || || || ||||| | |||||||
Sbjct 1699784 TCTATTGGTAGCAGCCGCGAACAATGTAGGCGACGCATGGGTAAAATAACGCTCAGACAA 1699843
Query 72471 TAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGTATTCCTACCGCGACACG 72530
| ||| || || |||||||| || || ||||| | |||||| |||| || || |
Sbjct 1699844 CAAATTATAAGTTTCAATAGCCGAATCAATATCGTCTCCATGTATACCTATAGCTACTCT 1699903
Query 72531 CATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTT 72590
||||||||||||||| ||||| ||||| ||||| ||| ||||| | ||| || ||| |
Sbjct 1699904 CATTAACATATGCTGTGGTCTCTCAACAATCTTACCATTCATTTTTAGCAAATAAGATCT 1699963
Query 72591 TTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGA 72650
|||| ||||| || || || |||||||| |||||| || || |||||||| |||
Sbjct 1699964 CTCCAGTGTTTTGAAGCCGAAGTAGTTGTAGCCAAAGTCACGATCATAAATAATTGACGA 1700023
Query 72651 ATTGAGTTTATCCTTATATTTGTTAACTATAT--CCATGGTGATACTTGAAATAATCGGA 72708
||| | || || ||| | |||| || ||||| || | ||||| | ||
Sbjct 1700024 ATTCAAACGTTCTGCATTTTTCTGCACTACATTGTAATGGT-ATTC-GGAAATCAATGGC 1700081
Query 72709 GAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAAT 72768
|| || ||| | | ||||||| | | | | ||| || || || |||
Sbjct 1700082 GATGGTCGCCCCGTCTCTTTATTAACAAAATGATACAGATCACTTATAACCTCTGAGAAT 1700141
Query 72769 AGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAA 72828
| |||||| ||||| ||||| | ||| || || || || | || || | |||||||||
Sbjct 1700142 ACTTTTTTCGTTTCTTTGTGCAAATTGGAGACAGCAATGCGAGCTGCCAATATGGCATAA 1700201
Query 72829 TCTGGATGTTGTGTAGTACAAGTGGCTGCTATTTCTGCTGCCAGAGTGTCCAATTCTACC 72888
||| ||| | |||||| | || ||||| | ||||| |||| | |||||| ||||
Sbjct 1700202 TCTCCATGATTTGTAGTTAATGTAGCTGCGGTCTCTGCCGCCAAATTGTCCAGTTCTTGT 1700261
Query 72889 GTTGTTACTCCATTATATATTCCTTGGATAACCTTCATAGCTATTTTAATAGGATCTATA 72948
|| || || ||| || | || | || ||||||| | || | ||||| | |
Sbjct 1700262 GTAGTAACACCACAGTAAAGGCCATTAATTACCTTCAGTGTAATGGCCACTGGATCAACA 1700321
Query 72949 TGATCAGTGTTTAAGCCATAACATAATTTTCTAATACGAGACGTGATTTTATCAAACATA 73008
||| |||| ||||||||||||| ||| || || || || |||||||| ||
Sbjct 1700322 AAATCCATGTTCAAGCCATAACATAGCTTTTGTATGCGTGATGTTATTTTATCGAAATGT 1700381
Query 73009 ACATTTTCCCGGCATCCATTTCGTTTAACGACAAACATTTT 73049
|| | |||| || ||||| |||||||| ||||| | |||
Sbjct 1700382 ACCTCTTCCTTGCGTCCATCTCGTTTAAGAACAAATAATTT 1700422
>seq869
Length=1271022
Score = 284 bits (314), Expect = 2e-71
Identities = 504/726 (69%), Gaps = 13/726 (2%)
Strand=Plus/Minus
Query 41880 CCAATTCAGAAATCAATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAAT 41939
||||||| | ||| | ||| || | |||||||||||| ||| | || |||||
Sbjct 484158 CCAATTCCACCAGCAAACGATCGGCCACAAATTCTATATATTCCGACATTAATTTACAAT 484099
Query 41940 TCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCG 41999
|||| ||||| | || || || | ||| | ||||| ||||| |||||||| ||||
Sbjct 484098 TCATGCCTATCAAATTGACGGGCAAAGCATCTGTAAGGAATTCCTGTTCAATTTTCACCG 484039
Query 42000 CGTCTGTTATAATAGATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACA 42059
| || || ||||| | | | | ||| ||| || | | | |||||||||||||
Sbjct 484038 CTTCAGTGATAATTTCAATAATTCTCTCTCGACTGGGACGTTGTACCAAATGTTTAAACA 483979
Query 42060 TCAA-ACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAAC 42118
| || ||| || ||||| || || | ||||||||| | || || || ||||| ||
Sbjct 483978 TTAATACA-GCAAAATCACAATGTAAACCCTCATCACGTGATATCAACTCATTGGAGAAT 483920
Query 42119 GTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAA 42178
|| || || ||||| || ||||| || || |||||||| || || ||||| ||| |
Sbjct 483919 GTAAGACCAGGCATAAGACCACGTTTCTTTAGCCAAAAGATGGAAGCAAAACTGCCACTA 483860
Query 42179 AAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCAC-TGTC 42237
||||| || || ||||| || ||||| ||||||| | || ||| || || | ||
Sbjct 483859 AAGAAAATACCCTCTACAGCAGCAAAAGCAATAATACGTTCACCAAAATTTGCTGATTTC 483800
Query 42238 --ATGTATCCA--CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTA 42293
| ||||| | ||| ||||||||||||| || ||| ||||| ||||| |
Sbjct 483799 GAAGAAATCCAAGCCATTG--CCCAATCGGCCTTACGCTTAACAGCTGGCATAGTTTCAA 483742
Query 42294 TGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGAC 42353
| |||||||||||||| | | | || ||| |||| ||| |||| || | || ||
Sbjct 483741 TAGCATTAAAGAGATAATCACGCTGTTCACGATCCTTAATATAACTATCAATTAGAATAC 483682
Query 42354 TATACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCT 42413
|||||||||| || || | ||||| ||||| || ||||| || |||||||| | ||||
Sbjct 483681 TATACATTTCAGAGTGTACATTTTCCATGGCAATTTGAAAGCCATAGAAACAGCGTGCCT 483622
Query 42414 CGGTAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCAC 42473
| ||||| ||||||||| | | || ||||| | | |||||| || || || || ||
Sbjct 483621 CTGTAACTTGTACTTCTTGAGAGAAACGTTCGACAAGATTTTCATTGACAATGCCATCGG 483562
Query 42474 TGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGT--CCGGTGTTAATTT 42531
|| || || || || | |||||| || |||| || | ||||| | | |
Sbjct 483561 AAGCGGCGAAGAAAGCAAGAACATGTGAAATGAAATGACGCTCATTGTCGGTG--AGTCT 483504
Query 42532 ATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTC 42591
| ||| || | |||||||||| | |||||||||||||||||||||||| || |||||
Sbjct 483503 TTCCCAGTCGGAGTTATCTTTAGAAAGATCTACTTCTTCTACCGTCCAAAAAGAAGCTTC 483444
Query 42592 TGCCTT 42597
|||||
Sbjct 483443 GGCCTT 483438
>seq583
Length=2816
Score = 122 bits (134), Expect = 1e-22
Identities = 314/473 (66%), Gaps = 4/473 (1%)
Strand=Plus/Minus
Query 41749 GTCTTCTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATT 41808
||| | || || |||||| || || ||||| |||| ||||| || || || || ||
Sbjct 641 GTCCTGTTTAGCCATAACACCGGCCTTCTGGTAGTCACTAACACGCTTCTCAAAGAAGTT 582
Query 41809 AGTCTTTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAt 41868
|||||| || |||| || ||||| ||||||||||| || ||||||| ||| || |||||
Sbjct 581 AGTCTTACCAGCCAAAGAGATATTCTCCATGAAATCGAAGGGATTGGCAACCTTGTAAAT 522
Query 41869 ttttttAAATCCCAATTCAGAAATCAATCTATCTGCGATGAATTCTATATATGTTTTCAT 41928
|| | | ||||| || || || | || || | | | || | || |||||
Sbjct 521 CTTCTCATGGCCCAAGGCAACCATTAAACGGTCAGCTACGTACTCAACGTACTGATTCAT 462
Query 41929 CATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACA-GTAAGAAATTCTTGTT 41987
|| ||| |||||| || | | | ||| || | ||| || | ||| | |||||||
Sbjct 461 CAAATCAGCATTCATACCAAGCAAGTGAACAGGCAAAGCATCACGGAAG-TACTCTTGTT 403
Query 41988 CAATAGAGACCGCGTCTGTTATAATA-GATCTTACTGTTTCTTCACTCGGTGGATACAAT 42046
||||| || || || || |||||| | || | | || ||| || | | | |
Sbjct 402 CAATATCAACAGCCTCGGTCATAATACGCTC-AATAATCTCACGACTGGGACGGTTCTCT 344
Query 42047 AAATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAAT 42106
|| || || | | ||| |||||||| ||||| |||||||||||| ||| |
Sbjct 343 AAGTGAGAGAAGAGAAGACAAGCGAAATCAGTGTGCATACCCTCATCTCTGGAAATAAGC 284
Query 42107 TCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCA 42166
|| || || || | || ||||| | ||||||||| || | ||| || || | ||
Sbjct 283 TCATTACTGAATGTTAAACCAGGCATCAAGCCACGCTTCTTCAACCAGAAAATGGCAGCG 224
Query 42167 AATGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTC 42219
||||| ||| ||||||| || || || || || || || | | ||||||
Sbjct 223 AATGAACCACTGAAGAAGACACCCTCGACAGCAGCGAAAGCGACTAATCTCTC 171
>seq1394
Length=309634
Score = 100 bits (110), Expect = 4e-16
Identities = 87/108 (81%), Gaps = 0/108 (0%)
Strand=Plus/Plus
Query 36473 AATACCCAATTCCTTGACCTGAGTTAGTGATCTCCAATCCATGTTAGCGCTTCCTAAATA 36532
|||||| ||||| || ||||| |||| |||||||| ||||| || || || || |||||
Sbjct 287882 AATACCTAATTCTTTAACCTGCGTTAAAGATCTCCAGTCCATATTGGCACTGCCCAAATA 287941
Query 36533 AATATGTGTATTATCAGATATCCAAAATTTTGTATGAAGAACTCCTCC 36580
||||||| | || ||||| ||||| ||||||||||| | ||| || ||
Sbjct 287942 AATATGTTTTTTGTCAGAAATCCAGAATTTTGTATGTAAAACACCACC 287989
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671124829231880
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