Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= NC_004775.1 Length=39671 Score E Sequences producing significant alignments: (Bits) Value seq599 105 2e-18 >seq599 Length=2526 Score = 105 bits (116), Expect = 2e-18 Identities = 233/347 (67%), Gaps = 2/347 (1%) Strand=Plus/Minus Query 10025 ACCATACTGGCAAACCACCTTTTCCAGAAACATAGCATTGTTGACTGGTCATTCTGCATT 10084 ||||| |||| || ||||| || || || ||| |||| ||| | || | ||| Sbjct 803 ACCATCATGGCTAATCACCTATTTCAACGCCACCAGATTATTGATTGGGCGTTTTCTATT 744 Query 10085 GTTCCTTACAGCAGCGCATTCTGCATTCGTGATGACGGTAAATTGCTGGTGTTGACCTAT 10144 ||||||||| | ||| | || |||||||| ||||| ||||| || ||||| || Sbjct 743 GTTCCTTACTCAATCGCCTGGTGTATTCGTGACGACGGAAAATTACTTTCATTGACGTAC 684 Query 10145 CTGCGCGACCAGCAGGTTTTCGCCTGGGCGCCACAATCCAGCGCTGGAAAGTACGAAAGC 10204 || | || ||||| || || || |||||||||||| | | || | | ||| Sbjct 683 CTCAGAGAGCAGCAAGTATTTGCTTGGGCGCCACAAGAAACAGACGGGCAATTTGAATCA 624 Query 10205 ACATGCTCCATCAGTGAAGGCAGCGAGGATGCTGTTTACTTCGTGGTTAACCGTACTATC 10264 || ||| | |||||||||| | || ||||| ||||||||| | || ||||| | Sbjct 623 ACCTGCAGCGTCAGTGAAGGTAATGAAGATGCGGTTTACTTCATTGTGTGCCGTAAAGTT 564 Query 10265 AATGG-GCAGACCGTACGTTACATCGAACGCCTGTCCAGTCGCCTGTTCACCAATGATGA 10323 ||| | || || |||||||| || || || |||||||| || || || || Sbjct 563 GGTGGCGGTGA-GGTGCGTTACATAGAGCGTTTGAGTAGTCGCCTATTTACTAAGACAGA 505 Query 10324 AGACGCATTCTTTGTAGACTGCGGACTGAGCTACGACGGGCGCAATA 10370 ||||| |||||||| || | || || || || ||||| | |||| Sbjct 504 GGACGCTTTCTTTGTTGATTCTGGTCTAAGTTATGACGGCAGAAATA 458 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126823020129498