Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq964 89.7 4e-13 >seq964 Length=291957 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 18815 CCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCC 18874 || || ||||| | || |||| ||| | ||||| || |||||||| || ||||| | Sbjct 215866 CCACCACGCAAACGCAATACCAAGTGAAGGGTAGATTCTTTTTGAATGTTATAATCGGAT 215807 Query 18875 ATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGC 18934 | || | | || |||| ||||||||| || |||| | | ||| ||||| ||| Sbjct 215806 AAAGTGCGGCCATCTTCCAACTGTTTACCAGCGAAAATCAAACGCTGTTGATCTGGGGGA 215747 Query 18935 ACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTT 18994 | || |||||||| ||||| ||| || | | | |||||| ||| || Sbjct 215746 ATACCTTCTTTGTCTTGGATTTTAGCTTTAACATTTTCTATAGTATCCGAAGGTTCAACC 215687 Query 18995 TCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041 || | ||||| |||||||| ||||| ||||| || ||||||||||| Sbjct 215686 TCCAATGTAATTGTTTTACCCGTTAATGTTTTAACGAAAATTTGCAT 215640 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 18815 CCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCC 18874 || || ||||| | || |||| ||| | ||||| || ||||||||||| ||||| | | Sbjct 215410 CCACCACGCAAACGTAGAACCAAGTGGAGAGTAGATTCTTTTTGAATATTATAATCGGAC 215351 Query 18875 ATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGC 18934 | || |||| |||| |||||||| ||| |||| || | || ||||| ||| Sbjct 215350 AAAGTGCGTCCGTCTTCCAATTGTTTACCGGCAAAAATTAGACGTTGTTGATCTGGGGGA 215291 Query 18935 ACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTT 18994 | ||||| || || |||||| || || | | | ||||| ||| || Sbjct 215290 ATACCCTCCTTATCTTGAATTTTAGCCTTAACATTTTCAATCGTATCCGAAGGTTCGACC 215231 Query 18995 TCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCATTTT 19044 || | ||| ||||| || || |||||||| || || || ||||||||||| Sbjct 215230 TCAAGGGTGATGGTCTTGCCAGTTAAAGTCTTCACGAAGATTTGCATTTT 215181 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414564144885922