Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= NC_005260.1 Length=233234 Score E Sequences producing significant alignments: (Bits) Value seq253 324 2e-83 >seq253 Length=360942 Score = 324 bits (358), Expect = 2e-83 Identities = 1179/1816 (65%), Gaps = 86/1816 (5%) Strand=Plus/Plus Query 36999 ATGTTTTACTCGTTTTTGGACTTCATCCTGCTTGCC-GCGATTAAATGCGCGAGAACCAG 37057 |||||| | ||| || |||||| || || || || ||| ||||||| |||| | | | Sbjct 103991 ATGTTTAATGCGTCGTTTGACTTCTTCTTGTTTACCCGCG-TTAAATGGTCGAGCATCTG 104049 Query 37058 GCGCACCGAGATAACCGCATACGCGACGAATAACGTTCATT---TTGGTATCGTCATGAT 37114 | ||| |||||||| || || | ||| || ||| | ||||| |||||| | Sbjct 104050 GGCTACCTAGATAACCACACACTCTACGGATCACGGAGACACGGTTGGT---GTCATGGT 104106 Query 37115 TACCACATTTAGGACATTCGTACCCTTTGGAAGTAGCAGTGAA-TTCACCGTGATAGCCA 37173 ||||||| || || | | ||||| ||| |||| || ||||||| | | ||| Sbjct 104107 TACCACAACGTGGGCACACAAAACCTTTACTGGTA-CAGTTAAATTCACCGGTAAATCCA 104165 Query 37174 CATTCAAAGCAAACATCAACAGGAGTATTTGTTCCGTAATACGGTGTGTTCAGATAAGCA 37233 |||||| | || |||||| ||| || || ||||| ||||| ||| | | ||| Sbjct 104166 CATTCATAACATTCATCAATAGGCGTGTTGGTTCCATAATAAGGTACATGCTCATAGCTG 104225 Query 37234 TAATCCCAAACGTCTTCCAACGCTTTCAGATTATTTTTCATATTCGGATATTCTCCGTAT 37293 || |||||||||||||| | ||||||| || | | | || ||||| || ||||| Sbjct 104226 TAGTCCCAAACGTCTTCAAGTGCTTTCAAGTTGTGCTGTAAGTTTGGATACTCGCCGTAG 104285 Query 37294 GAAATAAATCCACCTGAACTCAGAGGAATAAATTGCTTTTCAAAATCAATCTTGTCATAA 37353 ||||||| || || |||| | || ||| ||||||||||||||| || || Sbjct 104286 CAAATAAAACCGCCATTTGCGAGAGCAGGGTATGGCTGTTCAAAATCAATCTTATCGTAT 104345 Query 37354 GGATT---GGTATTATGACGGACGTCGAGGTGGAAGCTGTTTGTGTAATAATCTTTATCG 37410 || || | || | | || || |||||||| || || ||||| ||| |||| || Sbjct 104346 GGGTTAACGCGTTTTTCA---ACATCAAGGTGGAAACTATTGGTGTAGTAACCTTTTTCC 104402 Query 37411 --AACACTTT--ATGAGTCGGATAAAGTTCGC--TATCAATTTTAGCGAAACGATAGCAC 37464 ||||| || || | | ||| | || |||||| | |||||||| ||| Sbjct 104403 GTAACACCTTCGATAACCCC---AAACTCAGCAGTATCAAGGCGACAGAAACGATCACAC 104459 Query 37465 AGGCTTTCAGATGGAGTACCGTACAGGCTGAAAGCCAAACCAGTTTCAGCTTTCCAAGAA 37524 | | ||||| ||| || | || ||||| ||| | | || ||||| |||||||| | Sbjct 104460 AAGTTTTCACTTGGGGTGCTATAAAGGCTAAAACCATAGCCTGTTTCTGCTTTCCATTCA 104519 Query 37525 TCGGTAATCTCTTTCATGTGTTTAAGAACAGACAGAGCGAACACTTGTTTGGTTT----- 37579 ||||| | ||| | || || | | |||| ||| || || Sbjct 104520 TCGGT---CGCTTG---GCGTAGGCGATCCACAATCGCGATGGCTTTTTCTCTTAATAAT 104573 Query 37580 -GATTCTC-----CATGATGTGTTCATCGATACCATACATCATGATTTCACTCAGTTCAT 37633 | || || |||| ||| | | | | | ||| ||||| || |||| Sbjct 104574 GGGTTGTCGTACACATGCTGTTGTGTACCAAATAGTGCAT--TGATTG---TC---TCAT 104625 Query 37634 GCAGGCCGATATAGCCGATACTGACA--GAAGCGCGTCCATTTTCAAATGCTTTCATGAT 37691 | | ||| |||||||| || ||| | || ||||| || |||| ||| | | | Sbjct 104626 GTAAGCCAATATAGCC--TAATGATATGGATGCGCGACCGTTTTTAAAGATCTCCGCCAC 104683 Query 37692 ATCGTCATCTGGATTCAGACGTACACCGCAGGCGCCTTCGACGTAAAGAATCGGAGCCAC 37751 | ||||||| || || ||||| |||||||||||||| | || || || || || || Sbjct 104684 ACTATCATCTGCTTTGAGTCGTACTCCGCAGGCGCCTTCCATATATAGGATAGGTGCAAC 104743 Query 37752 GCTTGCCTTAACGCCACGCAGACGATCAACACGTACCATTAGAGCTTGTTTAACTACTTC 37811 || ||| || || || || ||| ||| ||| | |||| ||| | | | Sbjct 104744 GCGTGCTTTGACATTTTCTAGGCGTGCAATGCGTGTCATCAAGGCTTTTTTGGCGATCGC 104803 Query 37812 CATACGCTCTTCCAGAAGCTCCCAGAAACGCATATG-ATTGCCGTTTGCGTCGAGTGCGA 37870 | || ||||| || | | ||| |||||| | | |||||| | || || | || | Sbjct 104804 TAGGCGTTCTTCGAGTCGTTGCCA-AAACGCGTCTTCATTGCCTTGCGCTTCAATGGCAA 104862 Query 37871 TACGCGGCAGATTCAGAGTAACAACCCCTAGATTATTACGACCTTCGTGAACTTCATTGC 37930 |||||||||| || || ||| || |||| ||||||||| || || |||| || | || Sbjct 104863 TACGCGGCAGGTTAAGGCTAATGACACCTAAATTATTACGGCCATCATGAATTTGTTGGC 104922 Query 37931 CATTTTCGTCTTCCCAACGATGCAAGAAACTGCGGCATCCCATAGGGAACTTAAAGCTGC 37990 ||||||| || | || ||||| |||||||| ||||| || ||||| || Sbjct 104923 CATTTTCTTCGTAGACACCT---AAGAAGCTGCGGCAGCCCATTGGCGTTTTAAACGAGC 104979 Query 37991 CAGTTGTTTCAACAACTTTATCATAACTCAGAATATCTGGATACATACGCTTAGAAGCGC 38050 | ||| || |||||||| ||||| | | || || |||||||| || || || | Sbjct 104980 CCGTTACATCGACAACTTTGTCATAGTTTAAGATGTCGGGATACATGCGTTTGCTCGCAC 105039 Query 38051 ACTCCAGTGCCAGTTGCTTGATACGATAAAGCGGGTCAG----TTGGCTTCAAGTTGTGT 38106 |||| | ||| | || |||||| ||| || ||| |||| | | || | Sbjct 105040 ACTCTAATGCTAACTGTTTGATATCATAGTTAGGATCACCATATTGG--TGA--TTAAGG 105095 Query 38107 CCGTCTTTCAGAGCAAACACCAGTTTCGGGAACACCGGAGTGATACCCTCTTTGCCAAGT 38166 || | ||| | ||||||||| | ||| ||||| || | ||| ||| | ||| || | Sbjct 105096 CCTTTTTTAATAGCAAACACTAATTTAGGGAAAACGGCAGTTTTACGATTTTTACCTAAC 105155 Query 38167 CCAGCCAGTCGAACTTTCAAGATCGCTTCCTGAATCA---GTTCAGCTTCCCAGCTTTCA 38223 ||||| | || ||| | || | || || |||| || | ||| | | | Sbjct 105156 CCAGCGATACGGTTTTTTAGAATGGATTGTTGGATCAAGCGTGCTTCTTGCGATGTG--- 105212 Query 38224 CCCAGACCAAAGCCGAATGTACAGAAGGGAGTTTGACCGTTCGCGGAGTGAAGAGTGTTC 38283 || | |||||| || || || |||||| |||||||| || |||| || || |||||| Sbjct 105213 CCTAAACCAAACCCAAAGGTTACGAAGGGGGTTTGACCATTGGCGGTATGCAGTGTGTTC 105272 Query 38284 ACCTCGTATTCGAGTCCCTGCATTGCATCATACACAG-CTTTGTGAGTCTTTGCAAT-AG 38341 || |||||||| || || | ||||| || ||| |||| | || || || || || Sbjct 105273 ACTTCGTATTCAAGGGATTGGAAGGCATCGTA-ACATTCTTTTTCGGT-TTGGCTATCAG 105330 Query 38342 CGTATTCTTTCGCATCTGGAATTTTCCAATAACGGGCTTCGTCCAAATGCTTTTCATGAG 38401 | || ||||||||||| ||| ||||| ||| | | ||| ||||||| Sbjct 105331 CATAGCCTTTCGCATCTTCAATGCCCCAATTGATCGCTGTTTTTAGATGTTTTTCATAGC 105390 Query 38402 TCATCTTAACATACGGTGCCAGCACTTCGTCAATACGATTAATTGTGTTGCCGCCGTAAA 38461 | || | ||||| || || || | ||| ||||| || || || ||| |||| || |||| Sbjct 105391 TGATGTGGACATAAGGAGCAAGGATTTCATCAATGCGGTTGATGGTGGTGCCACCATAAA 105450 Query 38462 TGTGACTTGCTACTTGCGCAATAATCTGAGCGACTACGGCAGCAGCGGTAGAAATGCTTT 38521 | || || |||||||| || ||||| || || || || | || || ||||| || Sbjct 105451 TATGGCTAGCTACTTGAGCGATAATTTGGGCTGTCACTGCGGTGGCAGTGGAAATTGATT 105510 Query 38522 TCGGAGTTTCGATCTGTGCATTTCCCATACGGAACCCGCGATCTAACATGCCTTTGACAT 38581 | |||| || || | ||||| ||||| ||||| | ||||||||||| | || Sbjct 105511 TAGGAGGCTCTATTTCGGCATTACCCATTTTAAACCCATTAGTTAACATGCCTTCAAGAT 105570 Query 38582 CTATCAACATGCAGTTAAACATTGGGAAGAATGGAGAATAGTCAAGATCATGGAAGTGCA 38641 | |||| ||| ||||||||||| ||||| ||||| | ||| || ||||| || | || | Sbjct 105571 CAATCAGCATACAGTTAAACATGGGGAAAAATGGCGCATAATCGAGATCGTGATAATGAA 105630 Query 38642 GCCAGCCTTTTTCGTGTGCTTGCATAACTTCAACAGG------AAGATAATGCTTTGCAA 38695 || |||||| || ||||| || || | || || || || || Sbjct 105631 TTTCACCGCGTTCGTGAGC---AATAACCACATCACGTGGCAAAATATGTTGTTTAGCGT 105687 Query 38696 AGTGCTTACTAACAATACCAGCAACCAGATCGCGTTGAGTAGGGATTACTTTAGCGTCTT 38755 | ||||| ||||| || || | || ||| ||||| |||||||| ||||| ||||| Sbjct 105688 AATGCTTTGCGACAATGCCTGCGAGCAAATCACGTTGGGTAGGGATCACTTTGCTGTCTT 105747 Query 38756 TGTTAGCATTCTCATT 38771 |||| ||||| ||||| Sbjct 105748 TGTTTGCATTTTCATT 105763 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 746204821547120