Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= NC_005344.1 Length=39043 Score E Sequences producing significant alignments: (Bits) Value seq165 147 5e-31 >seq165 Length=448888 Score = 147 bits (162), Expect = 5e-31 Identities = 244/351 (70%), Gaps = 6/351 (2%) Strand=Plus/Plus Query 21566 GCCACCAAGCATTTGCATGGTTCCACCAACGCCTACGATAACTTCGGTAGTGAACCTATC 21625 ||| || | ||||||||| | || |||| || | ||||| || ||| | | ||| Sbjct 55448 GCCGCCTAACATTTGCATTGAACCGCCAATATTAACAACCACTTCTGTGGTGTAACGATC 55507 Query 21626 CTGTCCGCTTTGATCCTGCCATTTTCTTGTCCGCAATTTGCCTTCAAGATAAACCTCAGA 21685 || || |||||||| ||||| || | ||| |||| ||||||| ||||| | || Sbjct 55508 TTGACCACTTTGATCTTGCCACTTACGTGTTTGCAAAGAACCTTCAATGTAAACTTGTGA 55567 Query 21686 GCCTTTTCGCAGATATTCGCTGGCAATTTCTGCCAGTTTCCCGCTCATTACCACGCGGTG 21745 ||||||| ||||||||||| |||| ||| || | ||| ||| || || || ||||| Sbjct 55568 GCCTTTTTTCAGATATTCGCCCGCAACTTCAGCTAATTTTCCGAAAATCACTACACGGTG 55627 Query 21746 CCACTCCGTCTGCTC---CTTTTGCTCTCCAGTTTGCTTATCACGCCATTGTTCTGACGT 21802 ||| || || | || | || || || ||||||||||| ||||| ||| || || Sbjct 55628 CCATTCGGTTTTTTCACGCATT---TCACCGGTTTGCTTATCGCGCCAGCTTTCAGAAGT 55684 Query 21803 AGCAACTGTAAGGTTTGCAAATGCCGTTCCTGATGGTGAATATCTGATTTCTGGATCATG 21862 || | || |||||||| | || || || || | |||||| ||||| || Sbjct 55685 TGCCAGAGTTAGGTTTGCCACAGCACCGCCGTTAGGCATGTAACGGATTTCAGGATCTTG 55744 Query 21863 CCCAAGGCGACCAATAATGATCACCTTATTTACGCCTCTGCTTGCCATTTA 21913 ||| | | ||| |||| || || ||||||||||||||||| |||||||| Sbjct 55745 CCCCAAGTTACCGATAAGAATTACTTTATTTACGCCTCTGCTGGCCATTTA 55795 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 124813461008530