Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= NC_005857.1 Length=51601 Score E Sequences producing significant alignments: (Bits) Value seq1596 203 1e-47 >seq1596 Length=248270 Score = 203 bits (224), Expect = 1e-47 Identities = 316/452 (70%), Gaps = 6/452 (1%) Strand=Plus/Minus Query 7959 ATGGCTGATAATCAGACATCGCCTGAGTATGCAATGCTGCCTGCAGGCACGCTAACCAAA 8018 ||||||||||| | |||| ||||| ||||||||| ||||||| ||||| | ||| Sbjct 92201 ATGGCTGATAAAAAATCATCCCCTGAATATGCAATGTTGCCTGCCGGCACTATCGTTAAA 92142 Query 8019 TGGGGGAAACCCGGCGACGCGCTGGCGGCGCTGAAGCCGCTTGATAACTGTAAAGCGTTG 8078 | || || || || || | | | | | |||| | || || ||||| ||||| Sbjct 92141 TTTGGTAAGCCGGGTGATACCGTTGAGCAGATGAAAGCACTGGAAAACTGCAAAGCAACA 92082 Query 8079 GGTGCGATGGGCCAGACCGGTGGGTTCGTTGACTGCACCACGCTGAAGGATAAGCAAAAG 8138 || || | ||| || || ||||| ||||| ||||| ||||| | ||||| | || Sbjct 92081 GGCGCAACGGGGTTAACTGGCGGGTTTGTTGATTGCACTACGCTTATCGATAAAAACAAA 92022 Query 8139 CAGTCAATCAGTGATCTGCCGGATGGCCCGGAAAAGTCGCTGGGGTTCATTGACGATCCT 8198 || |||||| ||| | |||||||| || ||||| || || ||||| || || ||||| Sbjct 92021 CAATCAATCTCCGATTTACCGGATGGACCTGAAAAATCACTTGGGTTTATCGATGATCCA 91962 Query 8199 GCGAATGCGAGCTTTACGGCGTTACTTAATGCGGCAGAGGCTCGCGAGACCATTCAGCTT 8258 | ||||||| ||| | ||||| | || || || | || || || | | ||| || Sbjct 91961 GAGAATGCGGATTTTGCTGCGTTTTTGAACGCTGCGAATGCCCGTGAAGTCGTGCAGTTT 91902 Query 8259 TATGTTGAGCTGCCGAACAAACGTACCGCAACAATGCTGCTGGCGTTGTCTGGCTGGCAG 8318 || ||||||| || ||||||||||| ||||| ||| | |||| || ||||||||| | Sbjct 91901 TACCTTGAGCTACCTAACAAACGTACAGCAACCATGATTTTGGCATTATCTGGCTGGGAA 91842 Query 8319 ATGAATGAAATCACCGCGCCAGCGAGTGAAGTGATTCAGATCACCGTACAAGGTAAGCAA 8378 |||||| | ||||| |||| ||| || || || || || ||| ||||||||||| Sbjct 91841 ATGAATAGCCTGGAAGCGCCCGCGAATGAGGTTATCCAAATTACTGTAAAAGGTAAGCAA 91782 Query 8379 AACAGCATTAAGTGGGG------TACTGCCGG 8404 || | ||| | ||||| ||||||||| Sbjct 91781 AATAACATCACATGGGGCGTTGCTACTGCCGG 91750 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 164998243558078