Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= NC_005905.1 Length=86462 Score E Sequences producing significant alignments: (Bits) Value seq967 116 2e-21 >seq967 Length=260411 Score = 116 bits (128), Expect = 2e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 3873 AAGGTGTACATTTTATGATGGCTGACGGTGGGTTCTCGGTTGAGGGTCAAGAAAATATGC 3932 |||| || |||||| | ||||| ||||| || || || ||||| |||||||||||||| | Sbjct 179531 AAGGCGTTCATTTTGTTATGGCAGACGGAGGATTTTCAGTTGAAGGTCAAGAAAATATTC 179590 Query 3933 AAGAAATGTTATCGAAAAAGATGTATTTGTGTCAATGTTTAATTGCATTGATGATCATAC 3992 |||| || ||||| ||| || | ||||| ||||||||| | | || | | ||| || Sbjct 179591 AAGAGATATTATCAAAACAGCTTTATTTATGTCAATGTCTCACCGCTCTTAAGATTTTAA 179650 Query 3993 GAATTGGTGGTCATTGTGTTATCAAATTTTTCGATATATTTACACCTTTTAGTGCTGGTT 4052 | |||| || |||| ||| | || ||||| ||||| || ||||| | ||| | Sbjct 179651 GGTGCAGTGGGAGTTTTGTTTGTAAACTCTTTGATATTTTTACGCCGTTTAGCGTTGGAT 179710 Query 4053 TAGTGTATTTGATGTAT 4069 | || ||||| |||||| Sbjct 179711 TGGTATATTTAATGTAT 179727 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 276547826338639