Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= NC_006949.1 Length=46900 Score E Sequences producing significant alignments: (Bits) Value seq165 111 5e-20 >seq165 Length=448888 Score = 111 bits (122), Expect = 5e-20 Identities = 236/351 (67%), Gaps = 6/351 (2%) Strand=Plus/Plus Query 32899 GCCACCAAGCATTTGCATGGTTCCACTAACGCCAACGATGACTTCGGTAGTGAACCGATT 32958 ||| || | ||||||||| | || | || ||| | ||||| || ||| | |||| Sbjct 55448 GCCGCCTAACATTTGCATTGAACCGCCAATATTAACAACCACTTCTGTGGTGTAACGATC 55507 Query 32959 CTGTCCACTTTGGTCCTGCCATTTTCTTGTCCGCAATTTGCCTTCAAGATAAACCTCAGA 33018 || |||||||| || ||||| || | ||| |||| ||||||| ||||| | || Sbjct 55508 TTGACCACTTTGATCTTGCCACTTACGTGTTTGCAAAGAACCTTCAATGTAAACTTGTGA 55567 Query 33019 GCCTTTTCGCAGATACTCGCTGGCAATTTCTGCCAGTTTCCCGCTCATCACCACACGGTG 33078 ||||||| |||||| |||| |||| ||| || | ||| ||| ||||| |||||||| Sbjct 55568 GCCTTTTTTCAGATATTCGCCCGCAACTTCAGCTAATTTTCCGAAAATCACTACACGGTG 55627 Query 33079 CCACTCCGTCTGCTC---CTTTTGCTCGCCAGTATTTTTATCTCGCCATTGTTCTGACGT 33135 ||| || || | || | || || || || | ||||| ||||| ||| || || Sbjct 55628 CCATTCGGTTTTTTCACGCATT---TCACCGGTTTGCTTATCGCGCCAGCTTTCAGAAGT 55684 Query 33136 AGCTATTGTCAGGTTAGCGAACGCTGTTCCTGATGGTGAGTATCTAACTTCCGGGTCTTG 33195 || | || ||||| || | || || || ||| | | ||| || ||||| Sbjct 55685 TGCCAGAGTTAGGTTTGCCACAGCACCGCCGTTAGGCATGTAACGGATTTCAGGATCTTG 55744 Query 33196 TCCAACCCGACAAAGGATAATCACCTTATTTACGCCTCTGCTTGCCATTTA 33246 || | || | | ||| || ||||||||||||||||| |||||||| Sbjct 55745 CCCCAAGTTACCGATAAGAATTACTTTATTTACGCCTCTGCTGGCCATTTA 55795 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 149955349564972