Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28]
1,713 sequences; 434,128,924 total letters
Query= NC_006949.1
Length=46900
Score E
Sequences producing significant alignments: (Bits) Value
seq165 111 5e-20
>seq165
Length=448888
Score = 111 bits (122), Expect = 5e-20
Identities = 236/351 (67%), Gaps = 6/351 (2%)
Strand=Plus/Plus
Query 32899 GCCACCAAGCATTTGCATGGTTCCACTAACGCCAACGATGACTTCGGTAGTGAACCGATT 32958
||| || | ||||||||| | || | || ||| | ||||| || ||| | ||||
Sbjct 55448 GCCGCCTAACATTTGCATTGAACCGCCAATATTAACAACCACTTCTGTGGTGTAACGATC 55507
Query 32959 CTGTCCACTTTGGTCCTGCCATTTTCTTGTCCGCAATTTGCCTTCAAGATAAACCTCAGA 33018
|| |||||||| || ||||| || | ||| |||| ||||||| ||||| | ||
Sbjct 55508 TTGACCACTTTGATCTTGCCACTTACGTGTTTGCAAAGAACCTTCAATGTAAACTTGTGA 55567
Query 33019 GCCTTTTCGCAGATACTCGCTGGCAATTTCTGCCAGTTTCCCGCTCATCACCACACGGTG 33078
||||||| |||||| |||| |||| ||| || | ||| ||| ||||| ||||||||
Sbjct 55568 GCCTTTTTTCAGATATTCGCCCGCAACTTCAGCTAATTTTCCGAAAATCACTACACGGTG 55627
Query 33079 CCACTCCGTCTGCTC---CTTTTGCTCGCCAGTATTTTTATCTCGCCATTGTTCTGACGT 33135
||| || || | || | || || || || | ||||| ||||| ||| || ||
Sbjct 55628 CCATTCGGTTTTTTCACGCATT---TCACCGGTTTGCTTATCGCGCCAGCTTTCAGAAGT 55684
Query 33136 AGCTATTGTCAGGTTAGCGAACGCTGTTCCTGATGGTGAGTATCTAACTTCCGGGTCTTG 33195
|| | || ||||| || | || || || ||| | | ||| || |||||
Sbjct 55685 TGCCAGAGTTAGGTTTGCCACAGCACCGCCGTTAGGCATGTAACGGATTTCAGGATCTTG 55744
Query 33196 TCCAACCCGACAAAGGATAATCACCTTATTTACGCCTCTGCTTGCCATTTA 33246
|| | || | | ||| || ||||||||||||||||| ||||||||
Sbjct 55745 CCCCAAGTTACCGATAAGAATTACTTTATTTACGCCTCTGCTGGCCATTTA 55795
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 149955349564972
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |