Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq1348 154 1e-32 seq1266 122 8e-23 seq1304 95.1 1e-14 seq1190 87.8 2e-12 seq964 82.4 7e-11 >seq1348 Length=1847788 Score = 154 bits (170), Expect = 1e-32 Identities = 620/955 (65%), Gaps = 40/955 (4%) Strand=Plus/Plus Query 147114 ACGGTGAATTGAATCGTGTTTGCTGCGGGTTTGGTTCTCAAATAGTACATGCCCGTTTTT 147173 ||||| |||||||| | || || || ||||| ||||||||||| |||||||| || ||| Sbjct 1698165 ACGGTAAATTGAATAGCATTGGCGGCTGGTTTTGTTCTCAAATAATACATGCCGGTCTTT 1698224 Query 147174 AAACCCTTTTCCCAAGAATAGTCGTGAATGGATGATAAAACTTTA---TAGGTTGGATTG 147230 || || || ||| | |||| || ||||| | || ||| || |||| | | Sbjct 1698225 AAGCCTGATTTCCAGGCATAGAAATGTATGGAGGTCAA---TTTGCCGTAATTTGGCTCG 1698281 Query 147231 GCCACAAAAAGATTGAGCGATTGGCTCTGATCGATGTAAGGTCCCCGCTCTGCGGCCATG 147290 |||||| | ||||| |||||| || ||||| ||| ||| || || || || ||||| Sbjct 1698282 GCCACATGTATATTGAACGATTGACTTTGATCTATGAAAGCGCCACGGTCGGCAGCCATT 1698341 Query 147291 TCCAACACTACTTTTTGTTTAATTTCCCAAGCGGTCTTGAAGAGCGCCTTGATATTGTGT 147350 | | || ||| |||||| | || ||| | || | |||| | Sbjct 1698342 TGTATGGTGGTCTTAACGGAAATCTCCCAAACTGTTTTGTATAGATCACGTATATGTTTG 1698401 Query 147351 GGAATTTCATCAATATTTTGTACAGATCCGTTGTTTTTAATAATTTT---TATCATGATA 147407 || ||||| || || ||||| || ||| || ||||||||| | |||| | Sbjct 1698402 GGTATTTCTTCTATGGCTTGTATGGAGCCGCGATTGGAAATAATTTTATTTTTCATTTCA 1698461 Query 147408 TCTGTCGA-ATAT-ACGTTGGTGTCTACGAGTTTATCGACGAGATGCTGATTGACCAC-T 147464 || | | | || | ||| | || || |||| | | ||| |||||||| || | Sbjct 1698462 TCATCCCATAAATCAAGTTCG-GT-TAAATCTTTA---AGCAAATGATGATTGACAACAT 1698516 Query 147465 TGATACTCGCCCGACAGAACTCTTCGTACGTACAAATTACTAGTAAACGGCTCGAACGAC 147524 ||| | || ||||||| ||| | || ||| | |||| || |||| || || || Sbjct 1698517 TGA-ATTCTCCCGACAAAACACGTCTAGTGTAAATATTAGAGGTGTACGGTTCAAAGGAT 1698575 Query 147525 TCGTTGTTACCTAGAATCTGTGCAGTCGTTGCCGTCGGCATGTAAGCAATCAATAATGAA 147584 || ||||| |||||||| ||||| |||| || || ||||| || | | || ||| Sbjct 1698576 TCATTGTTGCCTAGAATTTGTGCGGTCGAAGCTGTGGGCATTGGGGCTAATAGCAAAGAA 1698635 Query 147585 TTGCGTAAGCCGTGCATAGCCATTT-CTCGCTTAAGCTCGTCCCAGTTCCAAAGATCATT 147643 ||||||| || || | |||| ||| ||| | ||| ||||||||| | || | Sbjct 1698636 TTGCGTACACCATGTTGACTGATTTTCTC-CTTCAACTCTGACCAGTTCCACAAGTCTGT 1698694 Query 147644 CGATTGGTTAATATTCCACAAATCAAACTGTAAAAGTCCACAACTTGCAGGGCTTCCATC 147703 | | ||| ||||||||| |||| | |||| | || |||| | || | || Sbjct 1698695 GGGT--GTTT-TATTCCACATATCATATTGTAGTATACCCTTACTTACTGGACAGCCGGG 1698751 Query 147704 GTAAGAATCGTATGTTCCGTGCAGTTTAGCTAGTTCGATACTTTGACTT--AGTGCACCA 147761 |||| || ||||| || | || || | ||| ||| ||| | || ||| Sbjct 1698752 ATAAGTTTCATATGTGCCATCTTTTTCGGCCAATTCACAACTAG--CTTCCAAAGCGCCA 1698809 Query 147762 TAATAAATAGTTTCTGAAATCTTTTTATTTAAATCTCTAGCCTCTTGGCTGTCGTAGGGC 147821 |||||||||||||| |||||| || |||||| |||| || || || ||||| Sbjct 1698810 TAATAAATAGTTTCGAAAATCTGTTGATTTAACAAAAATGCCTTTTCACTCTCATAGGGG 1698869 Query 147822 ATATCCA---AAATGGCGAACGTATCCGCAAGTCCTTGAATACCGATACCGATGGGTCGG 147878 | || |||| || ||||| |||| || |||| ||| ||||| || || || Sbjct 1698870 TAACGCATTAAAATC---AAAGTATCGGCAAAACCCTGAACACCTATACCAATAGGACGA 1698926 Query 147879 TGTCTGAAATTCGATGCTTGAGCGCTAGCCAACGGATAAAAATTCAAGTCGATAATTTTA 147938 || | ||||| || | ||| | |||||||||||| || | |||||| ||||| Sbjct 1698927 TGACGCAAATTGGACTTTCTAGCTTCGGGCAACGGATAAAAGTTGATGTCGATGATTTTG 1698986 Query 147939 TTGAGATTATTGGTAACCACTCTAGATACATTGTAGAGCGACTTAAAGTCGAAG--CTTT 147996 |||||||| ||||||| ||| | | ||||| | | || || || ||| |||| Sbjct 1698987 TTGAGATTCTTGGTAATAACTTTTGTAACATTTTTCAATTTTTTGAAATCAAAGGTCTTT 1699046 Query 147997 TAAACTGTTTATTGGCAAAATTATTTACGGCAATCGAGGCCAAGTTACACACGGC 148051 | ||| || |||| |||| | |||||| |||||||| ||||| || || Sbjct 1699047 T---CTG--GCGTGACAAACATATTAAGGGCAATGGAGGCCAAATTACAAACAGC 1699096 >seq1266 Length=2164085 Score = 122 bits (134), Expect = 8e-23 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 71672 ACGCATGATGAACTATGGAATGCTGCTCAGCGACAGCTACGCAATGAGGGTAAAATTCAC 71731 || |||||||| |||||||| |||| || | ||||| |||||||||||||| || Sbjct 369026 ACCCATGATGATTTATGGAATTCTGCGCAACTGCAGCTGGTTAATGAGGGTAAAATGCAT 369085 Query 71732 GGATACCTACGCATGTACTGGGCCAAAAAGATTCTCGAGTGGACTCAAACTCCCGAGCAG 71791 || | |||||||||| ||||| || || || | || ||||| || ||||||||||| Sbjct 369086 GGCTTTTTACGCATGTATTGGGCTAAGAAAATCTTAGAATGGACAGAATCTCCCGAGCAG 369145 Query 71792 GCGCTCGAGTATTCTATTTATCTAAACGATAGATACAGTCTCGACGGTCGCGATCCTAAC 71851 || | || ||| | |||| || || ||| || ||| | || ||||| ||||| || Sbjct 369146 GCTTTGGAATATGCCATTTTACTTAATAATAAGTATAGTTTAGATGGTCGAGATCCCAAT 369205 Query 71852 GGTTATGTCGGT 71863 |||||||| ||| Sbjct 369206 GGTTATGTGGGT 369217 >seq1304 Length=336898 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | || || ||||| |||||||| || | || ||| | ||| | || | | Sbjct 274399 ATGCAGATCTTCGTCAAAACTTTAACTGGTAAGACCATTACCTTGGAAGTTGAGCCTTCC 274340 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 |||||||| || | ||||| || || ||||||||||| || || || |||||| Sbjct 274339 GACACCATTGAAAATGTCAAGGCCAAAATCCAAGACAAAGAAGGTATCCCCCCAGATCAA 274280 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| | | || | || || |||||| | ||||||| | | | | | |||||| ||| Sbjct 274279 CAACGTTTGATCTTCGCTGGTAAACAATTGGAAGATGGTCGCACCTTGTCCGACTACAAC 274220 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 || ||||| ||||| ||| | ||| |||| || Sbjct 274219 ATCCAAAAGGAATCCACTTTACATTTGGTACT 274188 >seq1190 Length=275307 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827 |||||| | ||||| ||||| |||| || || | ||||| | || | || | Sbjct 186672 AATGCAGATTTTTGTCAAAACCCTAACGGGTAAGACCATCACTCTTGAGGTCGAGCCGTC 186731 Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 |||||| || || | |||||| |||||| ||||||||||| || || || ||||| Sbjct 186732 CGACACTATTGAAAATGTCAAAGCCAAGATTCAGGACAAAGAAGGAATTCCACCAGATCA 186791 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947 |||| | | |||| || || |||||| | ||||||| | | || || || || Sbjct 186792 ACAACGTTTGATTTTCGCTGGAAAACAATTGGAAGATGGCCGTACTCTCTCTGATTACAA 186851 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 |||||||||||||| ||| | || |||| || | ||| | || || Sbjct 186852 TATTCAAAAAGAATCCACTTTGCACTTGGTATTGCGCCTTCGTGGTGG 186899 >seq964 Length=291957 Score = 82.4 bits (90), Expect = 7e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 26766 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCA 26825 ||||||||| | || || || || |||||||| || | |||||| | || | ||| | Sbjct 215181 AAAATGCAAATCTTCGTGAAGACTTTAACTGGCAAGACCATCACCCTTGAGGTCGAACCT 215240 Query 26826 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGAT 26885 || || || || | || || || ||| || || || || || || || ||| Sbjct 215241 TCGGATACGATTGAAAATGTTAAGGCTAAAATTCAAGATAAGGAGGGTATTCCCCCAGAT 215300 Query 26886 CAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTAT 26945 |||||| | || |||| | ||| |||||| | ||||| | | | | ||| ||| Sbjct 215301 CAACAACGTCTAATTTTTGCCGGTAAACAATTGGAAGACGGACGCACTTTGTCCGATTAT 215360 Query 26946 AACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 || |||||||||||||||||| |||| |||| || Sbjct 215361 AATATTCAAAAAGAATCTACTCTCCACTTGGTTCT 215395 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478652150641360