Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq964 95.1 1e-14 seq1190 93.3 4e-14 >seq964 Length=291957 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||| ||||| || || | || || |||||||| || | ||| ||| | Sbjct 215412 ATGCAAATCTTTGTTAAGACATTGACTGGCAAAACCATCACTTTGGAAGTTGAGCCTTCT 215471 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 || ||| ||| | | || ||| |||||| || |||||||| |||| ||||| Sbjct 215472 GATACTATTGAAAATGTTAAAGCTAAAATTCAAGACAAAGAAGGAATCCCACCAGATCAA 215531 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 ||| | | |||| ||| ||||||||||| ||||| | || || | |||||||| Sbjct 215532 CAACGTTTGATTTTTGCTGGCAAACAATTGGAAGACGGGCGCACATTGTCTGATTATAAT 215591 Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 || |||||||| ||||| | ||| |||| || | ||||| || || Sbjct 215592 ATACAAAAAGAATCTACATTGCATTTGGTATTACGTTTGCGTGGTGG 215638 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||||||||| || ||||| | ||||| ||||| ||||| | || || | Sbjct 215640 ATGCAAATTTTCGTTAAAACATTAACGGGTAAAACAATTACATTGGAGGTTGAACCTTCG 215699 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 || ||| | | | | || ||| ||||| || |||||||| | ||| ||||| Sbjct 215700 GATACTATAGAAAATGTTAAAGCTAAAATCCAAGACAAAGAAGGTATTCCCCCAGATCAA 215759 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 || | | |||| || || ||||| || ||||||| | || | ||||||||||| Sbjct 215760 CAGCGTTTGATTTTCGCTGGTAAACAGTTGGAAGATGGCCGCACTTTATCCGATTATAAC 215819 Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||||||||||| ||||| | || |||| ||| | ||||| || || Sbjct 215820 ATTCAAAAAGAATCTACCCTTCACTTGGTATTGCGTTTGCGTGGTGG 215866 >seq1190 Length=275307 Score = 93.3 bits (102), Expect = 4e-14 Identities = 149/214 (70%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 |||||| |||||||||||||| || ||||| || ||||| || | || ||| | Sbjct 186672 AATGCAGATTTTTGTCAAAACCCTAACGGGTAAGACCATCACTCTTGAGGTCGAGCCGTC 186731 Query 115345 CGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 ||||||| ||| | | || ||| || ||| || |||||||| | || ||||| Sbjct 186732 CGACACTATTGAAAATGTCAAAGCCAAGATTCAGGACAAAGAAGGAATTCCACCAGATCA 186791 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 ||| | | |||| || || |||||||| ||||||| | || | | ||||| || Sbjct 186792 ACAACGTTTGATTTTCGCTGGAAAACAATTGGAAGATGGCCGTACTCTCTCTGATTACAA 186851 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTG 115498 ||||||||||| || ||| | || |||| ||| Sbjct 186852 TATTCAAAAAGAATCCACTTTGCACTTGGTATTG 186885 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425335120013560