Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq869 345 5e-90 seq1131 138 1e-27 seq829 132 5e-26 seq658 125 8e-24 >seq869 Length=1271022 Score = 345 bits (382), Expect = 5e-90 Identities = 500/703 (71%), Gaps = 2/703 (0%) Strand=Plus/Minus Query 92926 ATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCTAGAAGACGTAC 92985 ||| || ||||||||||| || | ||||| || | ||||||||| |||| | | || Sbjct 484139 ATCGGCCACAAATTCTATATATTCCGACATTAATTTACAATTCATGCCTATCAAATTGAC 484080 Query 92986 AGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGCTTCTTTCAAGATTTCTAT 93045 || | ||| || || | ||| || | || ||| || ||||| | | ||||| || Sbjct 484079 GGGCAAAGCATCTGTAAGGAATTCCTGTTCAATTTTCACCGCTTCAGTGATAATTTCAAT 484020 Query 93046 TACTCTACTATTTGGTGGTTT-TTGTACGACATAATTGTACATTAAGCACGCAAAGTCGG 93104 | ||| || | ||| |||||| | || || ||||||| ||||| || Sbjct 484019 AATTCT-CTCTCGACTGGGACGTTGTACCAAATGTTTAAACATTAATACAGCAAAATCAC 483961 Query 93105 TATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCTGGTAACAGTC 93164 ||||||||| || || |||||||||||||||||| |||||| | ||| || | || | Sbjct 483960 AATGTAAACCCTCATCACGTGATATCAACTCATTGGAGAATGTAAGACCAGGCATAAGAC 483901 Query 93165 CTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACCTTCCACGG 93224 | |||||||| |||||||| || ||||||||||| ||| ||| || ||||| || || | Sbjct 483900 CACGTTTCTTTAGCCAAAAGATGGAAGCAAAACTGCCACTAAAGAAAATACCCTCTACAG 483841 Query 93225 CTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCTGATCCATTTTAAAG 93284 | ||||| || | ||||||||| |||||||||| || || ||||| | | Sbjct 483840 CAGCAAAAGCAATAATACGTTCACCAAAATTTGCTGATTTCGAAGAAATCCAAGCCATTG 483781 Query 93285 CCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTAAATAGGTAATCTC 93344 |||||||||| || ||||| | || | ||||| ||||| ||||| || ||||| | Sbjct 483780 CCCAATCGGCCTTACGCTTAACAGCTGGCATAGTTTCAATAGCATTAAAGAGATAATCAC 483721 Query 93345 GCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACAT 93404 ||| || ||| || || |||| |||| | | |||||||||||| || |||| Sbjct 483720 GCTGTTCACGATCCTTAATATAACTATCAATTAGAATACTATACATTTCAGAGTGTACAT 483661 Query 93405 TCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAG 93464 | ||||| |||||||| || || |||||||| | || || || | || |||||||||| Sbjct 483660 TTTCCATGGCAATTTGAAAGCCATAGAAACAGCGTGCCTCTGTAACTTGTACTTCTTGAG 483601 Query 93465 AAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATA 93524 | || | || || |||||||||||||| || |||||||| || || || ||||| | | Sbjct 483600 AGAAACGTTCGACAAGATTTTCATTGACAATGCCATCGGAAGCGGCGAAGAAAGCAAGAA 483541 Query 93525 TATGCTTTATAAAATGTTTCTCATCATCTTTAAGCTTATCCCAATCGGATAGATCTTTTG 93584 ||| || ||||| ||||| || | || | ||||| ||||| |||||| | Sbjct 483540 CATGTGAAATGAAATGACGCTCATTGTCGGTGAGTCTTTCCCAGTCGGAGTTATCTTTAG 483481 Query 93585 AAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTT 93627 ||||||| |||||||| || |||||||| || ||||| || || Sbjct 483480 AAAGATCTACTTCTTCTACCGTCCAAAAAGAAGCTTCGGCCTT 483438 Score = 84.2 bits (92), Expect = 2e-11 Identities = 113/155 (73%), Gaps = 7/155 (5%) Strand=Plus/Minus Query 92742 TTAGAAATCTGCATCTAGTGTAAATACATTGTCAAGTGGATTCTTATTCATAACACCACA 92801 ||| ||||| ||||||| |||||| ||||| || | ||| | | | |||| | Sbjct 484390 TTAAAAATCGGCATCTAATGTAAAAACATTATCTAAACGATGAGAAGTTA---CACCCAA 484334 Query 92802 TTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTCCAAAGATATCGA 92861 |||||| ||||| |||||||| ||||||||||||||| || || |||||||| ||| | Sbjct 484333 TTTTTGATATTCACCAACTTTACGTTCAAAGAAATTTGTTTTACCATCCAAAGAGATC-A 484275 Query 92862 ATTCACTA---GTGATTGGATTCTTGGCGTTATAA 92893 ||| || | || ||||| |||| ||| ||| Sbjct 484274 TTTCCATAAAGGGGAAGGGATTTTTGGTGTTGTAA 484240 >seq1131 Length=554669 Score = 138 bits (152), Expect = 1e-27 Identities = 88/95 (93%), Gaps = 2/95 (2%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322 |||||||||||||||| |||||||||||||||||||||| |||||||||| |||||| Sbjct 49091 AGTCAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGAGGGAGC 49150 Query 126323 GTGGGTTCGAACCCCACACCTGACAAATTATTATT 126357 |||||||||||||||||||||||||||| |||||| Sbjct 49151 GTGGGTTCGAACCCCACACCTGACAAATAATTATT 49185 Score = 129 bits (142), Expect = 7e-25 Identities = 86/95 (91%), Gaps = 2/95 (2%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322 |||||||||||||||| |||||||||||||||||||||| |||||||||| |||||| Sbjct 45488 AGTCAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGAGGGAGC 45547 Query 126323 GTGGGTTCGAACCCCACACCTGACAAATTATTATT 126357 ||||||||||||||||||||||||||| ||| || Sbjct 45548 GTGGGTTCGAACCCCACACCTGACAAAGAATTTTT 45582 Score = 129 bits (142), Expect = 7e-25 Identities = 82/88 (93%), Gaps = 2/88 (2%) Strand=Plus/Plus Query 126264 CAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAG 126321 ||||||||||||||||| |||||||||||||||||||||| |||||||||| ||||| Sbjct 46149 CAGTCAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGAGGGAG 46208 Query 126322 CGTGGGTTCGAACCCCACACCTGACAAA 126349 |||||||||||||||||||||||||||| Sbjct 46209 CGTGGGTTCGAACCCCACACCTGACAAA 46236 Score = 129 bits (142), Expect = 7e-25 Identities = 86/95 (91%), Gaps = 2/95 (2%) Strand=Plus/Plus Query 126258 TATTTACAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--T 126315 ||| || |||||||||||||||| |||||||||||||||||||||| |||||||||| Sbjct 46433 TATATATAGTCAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAG 46492 Query 126316 CGGGAGCGTGGGTTCGAACCCCACACCTGACAAAT 126350 ||||||||||||||||||||||||||||||| || Sbjct 46493 AGGGAGCGTGGGTTCGAACCCCACACCTGACAGAT 46527 Score = 127 bits (140), Expect = 2e-24 Identities = 85/94 (90%), Gaps = 2/94 (2%) Strand=Plus/Plus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGCG 126323 ||||||||||||||| |||||||||||||||||||||| |||||||||| ||||||| Sbjct 47186 GTCAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGAGGGAGCG 47245 Query 126324 TGGGTTCGAACCCCACACCTGACAAATTATTATT 126357 |||||||||||||||||||||||||| | | ||| Sbjct 47246 TGGGTTCGAACCCCACACCTGACAAAATTTCATT 47279 Score = 127 bits (140), Expect = 2e-24 Identities = 81/87 (93%), Gaps = 2/87 (2%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322 |||||||||||||||| |||||||||||||||||||||| |||||||||| |||||| Sbjct 48741 AGTCAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGAGGGAGC 48800 Query 126323 GTGGGTTCGAACCCCACACCTGACAAA 126349 ||||||||||||||||||||||||||| Sbjct 48801 GTGGGTTCGAACCCCACACCTGACAAA 48827 Score = 125 bits (138), Expect = 8e-24 Identities = 93/107 (87%), Gaps = 5/107 (5%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322 |||||||||||||||| |||||||||||||||||||||| |||||||||| |||||| Sbjct 53213 AGTCAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGAGGGAGC 53272 Query 126323 GTGGGTTCGAACCCCACACCTGACA---AATTATTATTGGAATTTTT 126366 ||||||||||||||||||||||||| |||| || | ||||||| Sbjct 53273 GTGGGTTCGAACCCCACACCTGACAGAGAATTTTTTTAATAATTTTT 53319 Score = 123 bits (136), Expect = 3e-23 Identities = 79/85 (93%), Gaps = 2/85 (2%) Strand=Plus/Plus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGCG 126323 ||||||||||||||| |||||||||||||||||||||| |||||||||| ||||||| Sbjct 45760 GTCAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGAGGGAGCG 45819 Query 126324 TGGGTTCGAACCCCACACCTGACAA 126348 ||||||||||||||||||||||||| Sbjct 45820 TGGGTTCGAACCCCACACCTGACAA 45844 >seq829 Length=570638 Score = 132 bits (146), Expect = 5e-26 Identities = 95/107 (89%), Gaps = 3/107 (3%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322 |||||||||||||||| |||||||||||||||||||||| |||||||||| |||||| Sbjct 439192 AGTCAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGAGGGAGC 439133 Query 126323 GTGGGTTCGAACCCCACACCTGACAAATTATTATTGGAATTTTTGTT 126369 ||||||||||||||||||||||||||||| || || |||||| || Sbjct 439132 GTGGGTTCGAACCCCACACCTGACAAATT-TTCTTTTTATTTTTTTT 439087 >seq658 Length=557309 Score = 125 bits (138), Expect = 8e-24 Identities = 80/86 (93%), Gaps = 2/86 (2%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322 |||||||||||||||| |||||||||||||||||||||| |||||||||| |||||| Sbjct 8846 AGTCAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGAGGGAGC 8905 Query 126323 GTGGGTTCGAACCCCACACCTGACAA 126348 |||||||||||||||||||||||||| Sbjct 8906 GTGGGTTCGAACCCCACACCTGACAA 8931 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556848876218120