Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq1303 91.5 1e-13 >seq1303 Length=344040 Score = 91.5 bits (100), Expect = 1e-13 Identities = 168/244 (69%), Gaps = 2/244 (1%) Strand=Plus/Plus Query 20213 GTGTGAATAAACTCCCCGGGTCTAAGACCAGTAACATGAGCAAGCATATAAGTTAAGAGG 20272 || |||||||| || || ||| | | ||| |||| |||||||| |||||| |||| | Sbjct 95894 GTATGAATAAAATCTCCTGGTTTCAAACCGGTAATATGAGCAATCATATATGTTAGTAAA 95953 Query 20273 GAATAGCTGGCAATGTTAAAAGGAACTCCCAAACCCATGTCTCCCGACCTCTGATACAGC 20332 | ||| || || ||||| || || |||| ||||||||| | | || |||| | Sbjct 95954 GCATATGAAGCTATATTAAATGGTACACCCAGACCCATGTCAGCGCTGCGTTGGTACAAC 96013 Query 20333 TGACAGGAAAGCTCACCGTCAGCTACATAAAATTGA-CATAACAAGTGACAGGGCGGAAG 20391 || || || || ||||| | || ||||| ||||| | ||||| ||||||||||| | Sbjct 96014 TGGCATGATAGTTCACCATTTGCCACATAGAATTGTGCCAAACAA-TGACAGGGCGGCAA 96072 Query 20392 CGCCATCAACGACAAGTCCGCCGGGTTCCACGCACACATAATGATTCTTCTATCGTGCGG 20451 ||||| | | || || ||||| || ||||||| || | || ||| | || Sbjct 96073 AGCCATTTGTGGTATATCGAGAGGATTCCAGGCTGACATAATAATACGTCGATCATTGGG 96132 Query 20452 ATTA 20455 |||| Sbjct 96133 ATTA 96136 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441363349104920