Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= NC_009514.1 Length=47021 Score E Sequences producing significant alignments: (Bits) Value seq1596 132 1e-26 >seq1596 Length=248270 Score = 132 bits (146), Expect = 1e-26 Identities = 332/499 (67%), Gaps = 14/499 (3%) Strand=Plus/Minus Query 38511 CCCATGAACTGAAGGAAGTGGGCGATCAGTGGCGCACGCCGGATAACATTTTCTGGGGAA 38570 ||||||||||||| ||| | || ||||| ||| |||| || | | | ||||||| Sbjct 107788 CCCATGAACTGAAAGAAATTGGTGATCAATGGTGCACACCAAGTGCTTTGTATTGGGGAA 107729 Query 38571 TTAACACCCTGTTTGGCCCGTTTGTTCTGGATCTGTTCACTGATGGTGATAACGCCAAAT 38630 ||| | | | | || || |||||| |||| ||||| || | || || Sbjct 107728 TTAGCTCAATATACGGGATTTTCAAACTGGATTTGTTTACTGACGGAAAAAATAGTAAG- 107670 Query 38631 GTGCCGCTTATTAC---ACTGCGGAAGACAACGCGCTGGCGCATGACTGGTC-AGAACGT 38686 || |||||| | ||||| || || || || ||| |||| |||||||| | | | Sbjct 107669 --GCTCCTTATTTCTATACTGCAGAGGATAATGCACTGACGCAGGACTGGTCCACTAAG- 107613 Query 38687 CTTGCGGAGCTTAAAGGTGCTGCCTTTGGTAATCCCCCATACAGCCGCGCTAGTCAGCAT 38746 || || ||| || || ||||| ||||| ||||| ||||| ||| |||| || Sbjct 107612 CTGGCAGAGGTTGGCGGCGCTGCTTTTGGAAATCCGCCATATTCCCG---TAGTTCCTAT 107556 Query 38747 GAGGGGCAATA---CATCACCGGCATGCGTTACATCATGAAGCATGCCAGTGCCATGCGT 38803 | | || | |||||| ||| | || |||| ||||| ||||| | ||||| Sbjct 107555 CACGAAAAACAGCCCATCACTGGCGTTGGTCACATTATGAATCATGCAATGAAGATGCGA 107496 Query 38804 GATAAGGGCGGGCGCTATGTTTTCCTGATCAAAGCTGCCACCAGCGAAGTTTGGTGGCCG 38863 || || || || |||||||| || | | |||||||| || |||||| |||||||| Sbjct 107495 GAGAAAGGTGGTCGCTATGTGTTTTTACTAAAAGCTGCAACTAGCGAAACATGGTGGCCT 107436 Query 38864 GAAGATGCAGACCATATTGCTTTTATTCGCGGGCGTATTGGTTTTGAACTGCCTGCCTGG 38923 || |||| || ||| || |||||||| || ||||||||||| || | || ||| Sbjct 107435 GAGCATGCTGATCATGTTTGCTTTATTCGTGGTCGTATTGGTTTCGATGTCCCCCTATGG 107376 Query 38924 TTTATCCCGAAGGATGAGAAGCAGGTGCCGACAGGCGCTTTCTTCGCTGGTGCTATTGCT 38983 |||| ||| || || ||| ||| | || || ||||| || ||||| || | Sbjct 107375 TTTAACCCAGTTAGCGATAAACAGAAGCCAAGCGGTGCATTCTTTGCCGGTGCAATAGTC 107316 Query 38984 GTTTTCGACAAGACCTGGA 39002 |||||||| || || |||| Sbjct 107315 GTTTTCGATAAAACATGGA 107297 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 150342541688598