Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= NC_010495.1 Length=45051 Score E Sequences producing significant alignments: (Bits) Value seq165 100 8e-17 >seq165 Length=448888 Score = 100 bits (110), Expect = 8e-17 Identities = 191/277 (69%), Gaps = 17/277 (6%) Strand=Plus/Plus Query 32907 CCACTTACGAGT--GCGAAGTTGTCCTTCTATATAAACCTGCGACCCTTTACGAAGATAC 32964 ||||||||| || || ||| ||||| || ||||| || || ||||| ||||| Sbjct 55526 CCACTTACGTGTTTGCAAAGAA--CCTTCAATGTAAACTTGTGAGCCTTTTTTCAGATAT 55583 Query 32965 TCTCCTGCAACTTCCGCAATTTTTCCGAAGATAACAACTCGATGCCATTCAGTATGTTCT 33024 || || |||||||| || | ||||||||| || || || || |||||||| || | ||| Sbjct 55584 TCGCCCGCAACTTCAGCTAATTTTCCGAAAATCACTACACGGTGCCATTCGGTTTTTTCA 55643 Query 33025 TTCTTTTCTCCTGTTTGCTTGTCTTTCCACTGCTCAGATGTTGCAACAGAAAGGTTCGCA 33084 | |||| || |||||||| || ||| ||||| ||||| | || ||||| || Sbjct 55644 CGCATTTCACCGGTTTGCTTATCGCGCCAGCTTTCAGAAGTTGCCAGAGTTAGGTTTGCC 55703 Query 33085 ATTGCAGAGCC-TGATGCTGAATATTTAAC----TTCAGGGTCATTTCCGAGAGTGCCGA 33139 | ||| ||| | | || || |||| |||||| || | || | | |||| Sbjct 55704 ACAGCACCGCCGTTAGGC-----ATGTAACGGATTTCAGGATCTTGCCCCAAGTTACCGA 55758 Query 33140 CAATGATTACTTTATTTACGCC---GCGTGCCATTTA 33173 || ||||||||||||||||| || |||||||| Sbjct 55759 TAAGAATTACTTTATTTACGCCTCTGCTGGCCATTTA 55795 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 144038669923778