Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= NC_012697.1 Length=74611 Score E Sequences producing significant alignments: (Bits) Value seq410 95.1 6e-15 >seq410 Length=72445 Score = 95.1 bits (104), Expect = 6e-15 Identities = 469/736 (64%), Gaps = 18/736 (2%) Strand=Plus/Minus Query 67297 ATCCAAGGAATGAACCCACCCTGTTGTCCGGTGACTTCGATACCCACACCTTGAGGTGAA 67356 |||||| |||||| |||| || || || || ||||| | ||| ||| || || | Sbjct 22789 ATCCAACTAATGAAACCACTTTGCTGACCTGTTACTTCTACACCAACAGACTGTGGGTTA 22730 Query 67357 TACTCCTGTGCAAAATTGAACAGATCGTTGATAGTTTTGC--CCATCTGTTGACGTTCGC 67414 || || | | |||| | ||| || | | || || |||||| ||| | || Sbjct 22729 TAAATTTGAACCAGTCTGAATAAATCATTAA--GGTTAGCGTCCATCTCTTGTTTCTTGC 22672 Query 67415 ACAGACCATCAACCCAAATCCAGTTCCCATCCTTGTCATAGGCCCAAACAGAAATCACTG 67474 | | |||||| ||| | ||| || || | | |||||| ||||||||| ||| || Sbjct 22671 AAATACCATCTACCAAGTACCAATTACCTTGATAGTCATACGCCCAAACAATAATGACAC 22612 Query 67475 TGTAATCAGCGGTTTGCTTGGACGAAGTGGCAAAGTCAGTGGTGATATAGAAGTTGTAGT 67534 |||| ||||| | | || || || |||||||| ||||| || || | | || | Sbjct 22611 TGTAGTCAGCACTCTCTTTAGAAGAGACAGCAAAGTCTGTGGTAATGTAATAATGATAAT 22552 Query 67535 TCTTCCGATTAGACAGGATGTCCATCCGAGACTTCCAACCAATCTCATCT-TGTTGGATC 67593 ||| | | || || | | ||||| | | ||| ||| | ||| ||| Sbjct 22551 TCTGTAACTGTGTCATGAGATTTGTACGAGAGTAATACTGTATC-CATGACTCTTGAATC 22493 Query 67594 AGTCGTGATTCATCTGAGGTAATCCGAAGCATAAGTTCCTGACGGAAGGATTTCTCTTTC 67653 | || |||||| |||| ||| || | ||||||||| || || ||||| | | Sbjct 22492 ATTCTCTCTTCATCAGAGGCAATACGTAACATAAGTTCTTGGTTAAATGATTTAATTCGC 22433 Query 67654 CC--TTCCATGACAGCAGACTCATACATCTCCTTCACGTACTGGTAAGTGAATCGGTCTT 67711 || ||| | ||||| |||||||| ||| || | | || | |||||| || Sbjct 22432 CCAGTTC--TCACAGCCAACTCATACTGGCTCTTAACAAATTCATACGAGAATCGCTCAG 22375 Query 67712 CCCAAGCTCCACTGAATTCCTCTTCTGTACA-GGGAAACTCTTTGCAGACTGGCCATACG 67770 ||| || ||| ||||| | |||| ||| ||||| | || |||| || | ||| Sbjct 22374 GCCATGCACCAACAAATTCATGTTCTTCACAAGGGAAGCGCTCA-CAGATAGGGTAAACG 22316 Query 67771 TTTACCTGCCAAGCACCAGATTCAATTGCCTGATACACGATGTCTTCTTTATTGAACGGT 67830 || || | |||| | || || |||| |||| ||| | | || | ||||| || || Sbjct 22315 TTAACGTACCAACCGCCTGACTCAACGGCCTCATATAGAACATCATTCTTATTAAAAGGC 22256 Query 67831 GTTCCATTCAGAATCATCTTGTGACGAGTTGGATCCAAAGCATACTGAACACCGGAGTAG 67890 || ||||| | | ||||| | ||||| || | |||| | ||||||| || Sbjct 22255 GTACCATTAAAGACAATCTTTTTCTTTGTTGGGTCAAGGGCATGGTCAACACCGTTATAC 22196 Query 67891 ACCGTATCGTTGATCGCTTCCATTGCTGTTGGTGATTTGGAATCAGCATCTGAGATCAAG 67950 || || || || |||||||||||| ||||| || || | ||| | || | ||| Sbjct 22195 ACAGTGTCCTTAATCGCTTCCATTTCTGTTTTAGACTTAGCATCCTCGTCACTCACTAAG 22136 Query 67951 TCATCCATCACAGCAAGCACAGGACG---ACGGTTGAAAATCTTTGTACCCCGGATACCA 68007 ||||| | ||||| || |||||| || | | || || |||| |||||||| Sbjct 22135 TCATCAAGTACAGCCAGGGTAGGACGCTTACCAT---ACATTTTATTACCACGGATACCT 22079 Query 68008 GACTTGGCACCGAACA 68023 | ||| ||||| |||| Sbjct 22078 GTCTTAGCACCAAACA 22063 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 238625418068396