Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq1348 93.3 7e-14 >seq1348 Length=1847788 Score = 93.3 bits (102), Expect = 7e-14 Identities = 156/223 (70%), Gaps = 2/223 (1%) Strand=Plus/Plus Query 203840 TTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATGCCG 203899 || || || || || ||||| || || |||| || | |||||| ||| ||||||||| Sbjct 1698159 TTATCTACGGTAAATTGAATAGCATTGGCGGCTGGTTTTGTTCTCAAATAATACATGCCG 1698218 Query 203900 GTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGG 203959 ||||||| ||| | ||| | || | || ||||| | || ||||| || || Sbjct 1698219 GTCTTTAAGCCTGATTTCCAGGCATAGAAATGTATGGAGGTCAATTTGCCGTAATTTGGC 1698278 Query 203960 TCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCGGC 204018 ||||||| || || || | || || ||||| || |||||| ||||| || || || || Sbjct 1698279 TCGGCCACATGTATATTGAACGATTGACTTTGATCTATGAAA-GCGCCACGGTCGGCAGC 1698337 Query 204019 CATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTG 204061 ||| | || ||||||| ||||||||||| || || ||| Sbjct 1698338 CATTTGTATGGTGGTCTTAACGGAAATCTCCCAAACTGTTTTG 1698380 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795138173739280