Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= NC_013692.1 Length=72544 Score E Sequences producing significant alignments: (Bits) Value seq410 118 5e-22 >seq410 Length=72445 Score = 118 bits (130), Expect = 5e-22 Identities = 230/336 (68%), Gaps = 8/336 (2%) Strand=Plus/Minus Query 67943 ACGAAGTCATAGGTGAAGCGGTCAGGCCATGCACCACGGAACTC-TTCCCTTGAGCAGGG 68001 || || ||||| | ||| || ||||||||||||||| || || | ||| | || || Sbjct 22399 ACAAATTCATACGAGAATCGCTCAGGCCATGCACCAACAAATTCATGTTCTTCA-CAAGG 22341 Query 68002 GAACCGCTCACATACCGGGTAGACGTTGACCTTCCAAGCACCAGACTCCACTGCTTTGTA 68061 ||| |||||||| | ||||| ||||| || | |||| | || ||||| || || | || Sbjct 22340 GAAGCGCTCACAGATAGGGTAAACGTTAACGTACCAACCGCCTGACTCAACGGCCTCATA 22281 Query 68062 CAGTGGATCCTTCGCGTTGAACGGTGTACCCGACCAGATGATCATGTTCTTCTTCGGGTG 68121 || ||| ||| || || || ||||| ||| ||| | ||||| | |||| Sbjct 22280 TAGAACATCATTCTTATTAAAAGGCGTACCATTAAAGACAATCTTTTTCTTTGTTGGGTC 22221 Query 68122 CAGTGCATAGTCCACTGCCTTGTACACCGTGTCCTCAATGGCTGCGATGACAGTGGGCGA 68181 || |||| ||| || | || ||||| ||||||| ||| ||| | || | || || Sbjct 22220 AAGGGCATGGTCAACACCGTTATACACAGTGTCCTTAATCGCTTCCATTTCTGTTTTAGA 22161 Query 68182 GCGAGCATCTTCGTCCGAAACCAAGTCATCCAGTACCGCAAGCTGCGGACGTTTACC--- 68238 |||||| ||||| || |||||||| ||||| || || ||||| ||||| Sbjct 22160 CTTAGCATCCTCGTCACTCACTAAGTCATCAAGTACAGCCAGGGTAGGACGCTTACCATA 22101 Query 68239 CATCTCCTTCGCACCACGGACACCAGTCTTGGCACC 68274 ||| | || |||||||| ||| ||||| ||||| Sbjct 22100 CATTTTATT---ACCACGGATACCTGTCTTAGCACC 22068 Score = 82.4 bits (90), Expect = 4e-11 Identities = 144/206 (70%), Gaps = 4/206 (2%) Strand=Plus/Minus Query 61457 ACCAACACGGTTCACGCGACCGCCGATCTCGGTGAGGGTCGGCATCTTCGCGGTGATGTT 61516 |||||||||||| || ||||| || || | | |||||| || | ||| || Sbjct 34470 ACCAACACGGTTAACACGACCACCTTCTTCACCCATGTACGGCATTTTATCAAGGATTTT 34411 Query 61517 GCCCACGTCACGGCTCGAACCGTAGAGGTTGCCGTTGGCGATGGTAGCGCCGGAAGCGTC 61576 || ||||| |||||||| | ||| || | ||| || |||| ||||| || Sbjct 34410 ACCAACGTCTTTAGAAGAACCGTATAAGTTACCATCTTTGATTTTAACGCCAGAAGCATC 34351 Query 61577 GATACCCTGGTCGTTCACGTTGCGGTCGTCGAGCAGCGGGATGTAGTGCAGT-CGC-ACG 61634 |||||| |||||||||||||| ||||| || |||| || |||||||| || || ||| Sbjct 34350 GATACCTTGGTCGTTCACGTTACGGTCATCCAGCAATGGAATGTAGTG--GTAAGCAACG 34293 Query 61635 ATCTCTTTGCCGTAGTGCTTCGGCAT 61660 || ||||| || ||||| ||||| Sbjct 34292 ATTTCTTTACCCATATGCTTAGGCAT 34267 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 232011156158465