Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq869 165 1e-35 seq253 118 1e-21 >seq869 Length=1271022 Score = 165 bits (182), Expect = 1e-35 Identities = 469/704 (67%), Gaps = 25/704 (4%) Strand=Plus/Minus Query 119318 CAGAAGACGATCGGAGACATACTCGATATATTCGGACATCTTTTCCGAATTCATACCTAT 119377 ||| | |||||||| ||| | || |||||||| ||||| || ||||||| ||||| Sbjct 484148 CAGCAAACGATCGGCCACAAATTCTATATATTCCGACATTAATTTACAATTCATGCCTAT 484089 Query 119378 GAGATTACACGGG-AGAGCATCGAGGATGAAGTTCTTCTCGATCTCCACAGCTTCTTTCA 119436 | ||| ||||| | |||||| | ||| | || || || | ||| ||||| | | Sbjct 484088 CAAATTG-ACGGGCAAAGCATCTGTAAGGAATTCCTGTTCAATTTTCACCGCTTCAGTGA 484030 Query 119437 CGATGGAGTGAATAGTT-TCTGTCGA-TGGTTTGTT-TCTCAAGAGTTTAAACAACTCTA 119493 || | |||| || ||| |||| ||| ||| | ||| ||||||||| || Sbjct 484029 TAATT---TCAATAATTCTCTCTCGACTGGGACGTTGTACCAAATGTTTAAACATTAATA 483973 Query 119494 CGGCAAATTCTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTC 119553 | ||||| || ||| | || ||||| || || || | |||||| ||| ||| | Sbjct 483972 CAGCAAAATCACAATGTAAACCCTCATCACGTGATATCAACTCATTGGAGAATGTAAGAC 483913 Query 119554 CAGGCATGAGTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGA 119613 ||||||| || || | |||||||||||||||||||| | |||||| ||| |||||| | Sbjct 483912 CAGGCATAAGACCACGTTTCTTTAGCCAAAAGATGGAAGCAAAACTGCCACTAAAGAAAA 483853 Query 119614 TGCCCTCCACACAGGCGAAAGCGAATAGACGCTCAGCAAAAGGTCGAGACTT-GTCGAA- 119671 | ||||| ||| || ||||| | | ||| ||| ||||| | || || | ||| Sbjct 483852 TACCCTCTACAGCAGCAAAAGCAATAATACGTTCACCAAAATTTGCTGATTTCGAAGAAA 483793 Query 119672 -CCACTTGAGAGCCCAGTTGGCCTTACGCTCTATGCAG--GGGACAGTTTGGATGGCTTC 119728 ||| | ||||| | ||||||||||| || ||| || | ||||| || || | Sbjct 483792 TCCAAGCCATTGCCCAATCGGCCTTACGCT-TA-ACAGCTGGCATAGTTTCAATAGCATT 483735 Query 119729 GAAAAGTTGCT---TCTTTTCAGCACCATCCTTAATATATTTATCAATGAGTTTAGAGTA 119785 || || | | || || ||| |||||||||||| ||||||| || || || Sbjct 483734 AAAGAGATAATCACGCTGTT---CACGATCCTTAATATAACTATCAATTAGAATACTATA 483678 Query 119786 GGTCTCACCATGAACCATTTCATTGTGTGACTGATAGGCATAAAATGAGCGAGCTTCGGA 119845 | ||| || || |||| || ||| || |||| || |||| || || | Sbjct 483677 CATTTCAGAGTGTACATTTTCCATGGCAATTTGAAAGCCATAGAAACAGCGTGCCTCTGT 483618 Query 119846 AATTTGCACTTCGTCAGCAAAATTGTTGTTGATATTTTCAAAAACAATTCCATCGGATCC 119905 || ||| ||||| | || ||| | | | ||||||| ||||| |||||||| | Sbjct 483617 AACTTGTACTTCTTGAGAGAAACGTTCGACAAGATTTTCATTGACAATGCCATCGGAAGC 483558 Query 119906 AGCGAAGAATGC--TAAGATGTACTTTATGAATTTCTGTTCATTATCGTTGAGTGTTTTC 119963 |||||||| || || |||| ||||| | | ||||| ||| ||||| ||| | Sbjct 483557 GGCGAAGAAAGCAAGAACATGT--GAAATGAAATGACGCTCATTGTCGGTGAGTCTTTCC 483500 Query 119964 CAGTCGTCCATATCTTTAGACAAGTCCACCTCTTCAGCTGTCCA 120007 |||||| |||||||||| | || || ||||| | ||||| Sbjct 483499 CAGTCGGAGTTATCTTTAGAAAGATCTACTTCTTCTACCGTCCA 483456 >seq253 Length=360942 Score = 118 bits (130), Expect = 1e-21 Identities = 253/372 (68%), Gaps = 12/372 (3%) Strand=Plus/Minus Query 11502 ACGATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGC 11561 ||| |||||||||||||| || | || ||| ||||||| ||| ||||||| || || Sbjct 67712 ACGGTCGAAACGACCTGGACGTAATAATGCAGGGTCAAGAACATCTGCACGGTTAGTCGC 67653 Query 11562 GGCAATGACTACAATGCCAGTCTCATTG---TCGAAACCGTCCATTTCTGTGAGAAGCTG 11618 |||||||| | ||| || |||||| || ||||| |||||||| | | || Sbjct 67652 TGCAATGACGATAATACC---TTCATTGCCTTCAAAACCATCCATTTCAACCAACATTTG 67596 Query 11619 GTTGATCGTCTGTTCACGCTCATCGTTGGAG-GGCATACCACCTGCCGAACGCTTCTTAC 11677 ||| | || || || || ||||||| | || || |||||| ||| | || Sbjct 67595 GTTCAATGTTTGCTCGCGTTCATCGTGACCGCCGCCTA-AACCTGCGCCACGTTGACGAC 67537 Query 11678 CGACAGCGTCAATCTCATCGATGAATACGATACACG--GTTGGTTGGCACGTGCCTGTTC 11735 |||| || |||||||||||||| || | || || | | || || | || ||||| Sbjct 67536 CGACCGCATCAATCTCATCGATAAAGATAATGCAAGGCGCTGCTTTTTTC--GCTTGTTC 67479 Query 11736 GAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGCGGC 11795 ||| | ||||| ||||| || |||||||| || ||||| |||||||||| | | Sbjct 67478 GAACATATCACGAACACGAGATGCACCAACACCGACAAACATTTCAACGAAGTCAGAACC 67419 Query 11796 AGAACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTCTT 11855 ||| || || || || || | ||||||||||| ||| ||| || | || || Sbjct 67418 TGAAATAGTAAAAAATGGTACTTTTGCTTCACCAGCGATCGCTTTAGCAAGCAATGTTTT 67359 Query 11856 ACCCGTACCAGG 11867 ||| ||||| || Sbjct 67358 ACCTGTACCCGG 67347 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588963388551400