Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq1619 93.3 5e-14 >seq1619 Length=3001179 Score = 93.3 bits (102), Expect = 5e-14 Identities = 341/519 (66%), Gaps = 20/519 (4%) Strand=Plus/Minus Query 154596 TGTGATATCACAGGGTTTGATTCTATATCATTACAACCTAACGCAGGATCACAGGGTGAG 154655 ||||| |||||||| | ||| ||||| || || || || ||||| |||||||||| Sbjct 2321566 TGTGAGATCACAGGTTACGATAAAATATCCTTCCAGCCGAATTCAGGAGCACAGGGTGAA 2321507 Query 154656 TATGCAGGACTGTTAGCAATCCA-AGCATACCATCAAGGATCAGGA-GATGATAAAAGAA 154713 ||||| || || ||| || | ||| ||||| || | | | || | | | | | Sbjct 2321506 TATGCTGGTCTAAGAGCTATACGCAGC-TACCACGAAC-ACCGCAATGAGGGTCACCGCA 2321449 Query 154714 ATGTATGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCTAGTGCTGTCATGGCAG 154773 || | || | || ||| ||||| |||||||| |||||||| ||| ||||| | Sbjct 2321448 ATATTTGCCTAATTCCAATTTCAGCTCATGGAACCAATCCTGCATCAGCTCAGATGGCTG 2321389 Query 154774 GGATGAAAGTTGTAGGTGTCAAGTGTGATGAT----GATGGTAACATAGACATCAAAGAT 154829 | |||||||||| | ||| | || | ||||| | ||| || || || Sbjct 2321388 GAATGAAAGTTGA----GCCAATTCGTATTCTAGCAGATGGAAGCATTGATATGGCGCAT 2321333 Query 154830 CTAGAGAAGAAAGCAATCATGAATACATTTGAA--CTGTCATGTATTATGATTACATACC 154887 | | || ||| || ||| || | | | || |||||| ||||||| ||||| | Sbjct 2321332 TTGCGTGATAAGGCA-TC-TGAGCACGCTCGTAATCTATCATGTCTTATGATCACATATC 2321275 Query 154888 CATCTACACATGGTGTATTTGAAACTAACATTAGAC-AGATATGTAAGATCGTTCAT-GA 154945 | || || || ||||| || ||| | | | | || || | | ||||| || Sbjct 2321274 CCTCAACTATGGGCGTATTCGAGGA-AACCGTGGCCGACATTTGCGATTTAATTCATAGA 2321216 Query 154946 CAATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACAGGTAGGACTAGCAAA 155005 || ||| || || || ||||||||||| || ||| | ||||| || || || ||| Sbjct 2321215 CA-TGGGGGCCAAGTGTATCTTGATGGCGCCAATATGAATGCCCAAGTGGGCCTATGTCG 2321157 Query 155006 ACCATGTGAGTATGGTGCAGATGTATGTCATCTAAACTTACATAAAACATTCTGTATTCC 155065 || |||| ||||| ||||| | || |||| | || ||||| ||||||||||| Sbjct 2321156 CCCCGGTGATTATGGAAGTGATGTTTCCCACTTAAATCTGCACAAAACTTTCTGTATTCC 2321097 Query 155066 ACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGT 155104 |||||| ||||| ||||| || | ||||| || || || Sbjct 2321096 ACATGGTGGTGGTGGTCCAGGAATGGGTCCAATTGGAGT 2321058 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579200397605920