Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= NC_015293.1 Length=30651 Score E Sequences producing significant alignments: (Bits) Value seq165 120 6e-23 >seq165 Length=448888 Score = 120 bits (132), Expect = 6e-23 Identities = 199/285 (70%), Gaps = 2/285 (1%) Strand=Plus/Plus Query 1997 ATCAACAACAATTTCAGTGGTGTACTTTTCTTGACCTTGTTGGTCAGTCCATTTGCGGGT 2056 || |||||| | ||| |||||||| |||||||| ||| || ||| || || || Sbjct 55478 ATTAACAACCACTTCTGTGGTGTAACGATCTTGACCACTTTGATCTTGCCACTTACGTGT 55537 Query 2057 TTTTAACTTGCCTTCAATGTATAGCTTACTACCCTTACGT-ACATACTCGCCGATTATTT 2115 || || ||||||||||| | ||| | |||| | | ||| ||||| | || Sbjct 55538 TTGCAAAGAACCTTCAATGTAAA-CTTGTGAGCCTTTTTTCAGATATTCGCCCGCAACTT 55596 Query 2116 CAGCTAACTTTCCAAAAACAACAATTCTGTGCCACTCGGTTTCTTCTTTTGGCTCGCCAG 2175 ||||||| ||||| |||| || | | |||||| ||||||| ||| || || | Sbjct 55597 CAGCTAATTTTCCGAAAATCACTACACGGTGCCATTCGGTTTTTTCACGCATTTCACCGG 55656 Query 2176 TGCTTTTATCCTTCCATTTTTCGCTAGTTGCTAGAGTTAGGTTTGCCACTGCATTTCCGT 2235 | ||||| ||| |||| |||||| ||||||||||||||||| ||| |||| Sbjct 55657 TTTGCTTATCGCGCCAGCTTTCAGAAGTTGCCAGAGTTAGGTTTGCCACAGCACCGCCGT 55716 Query 2236 TAGGTATGTAACGAATTTCTGGATCTTGACCAGCATTACCAATAA 2280 |||| |||||||| ||||| |||||||| || ||||| |||| Sbjct 55717 TAGGCATGTAACGGATTTCAGGATCTTGCCCCAAGTTACCGATAA 55761 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 97959607277378