Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= NC_015295.1 Length=47279 Score E Sequences producing significant alignments: (Bits) Value seq165 80.6 8e-11 >seq165 Length=448888 Score = 80.6 bits (88), Expect = 8e-11 Identities = 144/204 (71%), Gaps = 10/204 (5%) Strand=Plus/Minus Query 37598 TGGCGAAAGAGTT--ACGCTGCCCGGTTATAGCATTGTCTCAGTTGAACCGTAATTTGGA 37655 |||| |||||||| | | | ||||| | || ||||| ||| | ||||| | || || Sbjct 62087 TGGCAAAAGAGTTGAATGTT--CCGGTCGTTGCTTTGTCACAGCTTAACCGAAGCTTAGA 62030 Query 37656 GCAGCGTGCAAACAAGCGACC-GTGCAATGCCGACTTACGTGAGTCGGGCGTAATCGAGC 37714 |||||||||| | || || || ||| | | | ||||||||||| || ||| ||||||| Sbjct 62029 GCAGCGTGCAGATAAACGCCCTGTGAACT-CTGACTTACGTGAATCAGGCTCTATCGAGC 61971 Query 37715 AGGAAGCTGATGTGATTTTCATGGTTTATCGCGACGAGAAGTACAACCCGCAGACAGAGA 37774 |||| ||||| | ||| | | ||||||| || ||| || | | || | || || Sbjct 61970 AGGATGCTGACCTTATTATGTTTATTTATCGTGATGAG--GTTTATCACGATAATAGTGA 61913 Query 37775 --TGAAAGGCGTCACTGAAATCAT 37796 ||||||| || ||||||| || Sbjct 61912 ATTGAAAGGGGTTGCTGAAATTAT 61889 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 151168124894346