Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq964 105 4e-18 >seq964 Length=291957 Score = 105 bits (116), Expect = 4e-18 Identities = 139/193 (72%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||| ||||| ||||| || ||||||||| | ||| |||| |||| ||||| |||||||| Sbjct 216846 TTCCTTCTGGATGTTGTAATCCGAAAGGGTGCGTCCATCTTCCAATTGTTTACCGGCAAA 216787 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || | ||||| |||||| | || | || ||||| || ||||| |||||| Sbjct 216786 GATCAAACGTTGTTGGTCTGGGGGAATACCTTCCTTATCTTGGATCTTAGCCTTGACGTT 216727 Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969 | | || | || | ||||| || | || ||||||||||| || | ||| ||||| Sbjct 216726 TTCAATGGTATCGGAAGGTTCAACTTCCAAAGTGATGGTTTTTCCGGTCAAAGTTTTCAC 216667 Query 34970 AAAGATCTGCATA 34982 |||||||||||| Sbjct 216666 GAAGATCTGCATA 216654 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324626822563464