Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= NC_017969.1 Length=108853 Score E Sequences producing significant alignments: (Bits) Value seq87 125 5e-24 >seq87 Length=489008 Score = 125 bits (138), Expect = 5e-24 Identities = 218/310 (70%), Gaps = 8/310 (3%) Strand=Plus/Minus Query 45190 ATGAGTGTGCATACATGGACGTAAGCAACC--TTTCGAGAACTCTCCAGGATTCCAGAAG 45247 |||||| |||||||| || |||||||| || |||| | | || || ||||| | || Sbjct 413308 ATGAGTATGCATACAAGGCCGTAAGCATCCCATTTCAA--ATTCACCTGGATTATAAAAC 413251 Query 45248 GTTAGAATTTCCCCACGATCATCAATGCCCTTCTTCAGGTTATGATAAATCTTGGCTAGT 45307 || | ||||| | || |||||||| || || || | ||||| | | || || Sbjct 413250 GTAATGATTTCAGCGCGGTCATCAATACCATTTTTTAAGTTATTAACCACTTTTTTAAGC 413191 Query 45308 TGGTCAAACATAAG-ACCATCGGAATTAGTCCACTGA-CGTCCTTGAACACCATAGACTC 45365 || || | || | |||||| | ||| ||| || ||||| |||||||| || | Sbjct 413190 TGATCGAG-ATGCGTACCATCAGGCCGCTGCCA-TGAGCGCCCTTGGACACCATAAACGC 413133 Query 45366 GTCCCATATCATCCTCACCTTTGCGATATGGATTGTCTAGCCAAGCTAAGTTTTCATTTG 45425 | ||||||||||| |||||||| || | ||| || | ||||||||| || ||||| | Sbjct 413132 GCCCCATATCATCTTCACCTTTACGGTGTGGGTTATTCAGCCAAGCTTGATTGTCATTCG 413073 Query 45426 CATTAGCATTCCATGTGTTAACACCAATAGCGCGGAATTGTGCTGCTGAATCATACCCAC 45485 |||| ||||||||||| ||| || || | |||||||| ||||| |||||| || | Sbjct 413072 CATTTGCATTCCATGTATTACAGCCGATTTCACGGAATTGAGCTGCATTATCATAACCGC 413013 Query 45486 GCAGATACCC 45495 | || || || Sbjct 413012 GTAGGTAACC 413003 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 348197530463102