Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= NC_017974.1 Length=149273 Score E Sequences producing significant alignments: (Bits) Value seq87 96.9 3e-15 >seq87 Length=489008 Score = 96.9 bits (106), Expect = 3e-15 Identities = 207/306 (68%), Gaps = 4/306 (1%) Strand=Plus/Plus Query 111135 GATCCTTTGCGATCGCATTAATGGTCAAGTCCCGGCGGGCCAAATCCTCTTCGATGGTCA 111194 |||| || || |||||||||||||||| || || || | ||| ||||| ||||| | Sbjct 362256 GATCTTTCGCAATCGCATTAATGGTCAGATCACGACGTAATAGATCATCTTCTATGGTAA 362315 Query 111195 CATCTGG-GCTGAACATCACCTCGAAATCGTG-GTATCCTGCGCCAGTTGAACGCTCGGT 111252 | || || || | | || || ||| | || || || | ||||||| ||| ||||| Sbjct 362316 CGTCAGGCGCAGCGTAGCAGCT--AAACCCTGTATAACCCGAGCCAGTTTTACGTTCGGT 362373 Query 111253 ACGGGCAAGGACGTACTCTTCCTTGGTCTCAGGATGCAGGTAAACTGGGAATGCGGCACC 111312 | ||| | | || ||||| | ||| | || || || | || ||||| | || Sbjct 362374 TCTGGCTAATGCATATTCTTCATGGGTTTTTGGGTGTAGAAATACAGGGAAATCTTTCCC 362433 Query 111313 GACTTGCTCGAAGCCGAGTGCCATCATCTCTTCGTGGGTGGAGCCGACCACAACGTAGTC 111372 ||||||| | |||| |||||| |||| |||| | || |||||||| || || || || Sbjct 362434 TACTTGCTGGTAGCCTTGTGCCAGCATCGCTTCAGGCGTAGAGCCGACAACGACATAATC 362493 Query 111373 ACGGTCTTTGCTCTCAACACCCATCAGTTCATCGCGGACCGCGCCGCCGACCAGATAGAT 111432 || || | || | |||||| || || ||||| || || |||||||| || Sbjct 362494 GCGATCAGAAACAGGCAGGCCAAGCAGTTCGTCACGTACCGCTCCACCTACCAGATATAT 362553 Query 111433 TTTCAT 111438 |||||| Sbjct 362554 TTTCAT 362559 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 477535374554840